SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01799  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005994
Annotation
proteasome_26S_non-ATPase_subunit_7_[Bombyx_mori]
Full name
26S proteasome non-ATPase regulatory subunit 7      
Alternative Name
26S proteasome regulatory subunit RPN8
26S proteasome regulatory subunit S12
Proteasome subunit p39B
Proteasome subunit p40
Protein Mov34
Location in the cell
PlasmaMembrane   Reliability : 4.949
 

Sequence

CDS
ATGCCTAGTCAAGAAGTAGCCACCACGAAAGTAACCACCAAAGTGGTGGTTCATCCGTTAGTGTTGCTCAGTGTCGTGGACCATTTTAACCGCATGAGTAAAATCGGGAATCAGAAACGAGTAGTCGGTGTTCTATTGGGTTGTTGGAGAGCCAAGGGTGTCTTAGACGTATCGAACAGCTTCGCAGTCCCGTTTGATGAAGACGACAAAGACAAATCTGTCTGGTTCCTTGACCATGATTACTTAGAGAACATGTATGGTATGTTCAAAAAGGTTAACGCCAGGGAAAAAGTTGTTGGCTGGTACCACACTGGACCTAAACTTCATCAGAATGACATAGCAATAAATGAGTTAATTAGGCGTTATTGCCCAAATTCAGTGCTTGTAATTATTGATGCTAAACCTAAAGATCTTGGTCTACCGACTGAAGCTTACCAAGCAGTAGAGGAAGTACACGATGATGGTACACCAACTTCGAGGACCTTTGAACATGTTCCAAGTGAAATTGGTGCAGAGGAGGCTGAAGAAGTGGGAGTAGAGCATTTGTTAAGAGATATCAAGGATACCACTGTGGGCAGTCTTTCACAGCGTATCACTAACCAGTTGCTCGGCTTAAAAGGTCTTCACTCACAATTGACAGAAATTAGAGATTACCTTGTTCAGGTTGGGCAGGGCTCCTTGCCAATGAACCACCAGATTATTTACCAGTTGCAAGACATCTTCAATTTGCTGCCAGATATTGCTAATGATAATTTCATTGATAATTTGTATGTCAAAACCAATGATCAATCACTTGTGGTATATTTAGCTGCTTTAGTGAGATCCATAATAGCATTACACAATTTGATCAACAATAAAATTACAAATAGAGATGCAGAGGAAGGAAAGAAAGATGAGAAAGATAAAAAAGAAAAAAAAGATGAAAAAGATGATAAAAAAACAGATGAAAAGGCAAAAGTAGAGAAGAAAGATAAAGAAGAGAAGAAAAAATAG
Protein
MPSQEVATTKVTTKVVVHPLVLLSVVDHFNRMSKIGNQKRVVGVLLGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSRTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDNLYVKTNDQSLVVYLAALVRSIIALHNLINNKITNRDAEEGKKDEKDKKEKKDEKDDKKTDEKAKVEKKDKEEKKK

Summary

Description
Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
Similarity
Belongs to the peptidase M67A family.
Keywords
Complete proteome   Direct protein sequencing   Proteasome   Reference proteome  
Feature
chain  26S proteasome non-ATPase regulatory subunit 7
EMBL
BABH01004805    DQ443389    ABF51478.1    ODYU01006621    SOQ48627.1    NWSH01000013    + More
PCG80854.1    KQ459601    KPI93989.1    AK402630    BAM19252.1    KQ460855    KPJ11895.1    GDQN01005872    JAT85182.1    GAIX01003283    JAA89277.1    AGBW02013271    OWR43683.1    KQ982959    KYQ48656.1    KQ435896    KOX69333.1    KZ288326    PBC27973.1    KK107455    QOIP01000010    EZA50487.1    RLU17390.1    KQ979054    KYN23196.1    KQ976618    KYM79202.1    KQ981382    KYN42214.1    KQ414646    KOC66505.1    GL437918    EFN69847.1    GL453780    EFN75539.1    LBMM01002954    KMQ94140.1    KQ434822    KZC07089.1    GL888218    EGI64494.1    NEVH01009368    PNF33496.1    KQ977279    KYN04190.1    KK852435    KDR23929.1    KDR23931.1    NNAY01000039    OXU31660.1    DS232412    EDS41430.1    AAAB01008986    EAA00201.4    AXCM01002803    CCAG010023606    EZ422551    ADD18827.1    KQ971343    EFA03341.1    JXJN01026718    APGK01040871    BT127379    KB740984    KB631899    AEE62341.1    ENN76315.1    ERL86960.1    ATLV01024391    KE525351    KFB51318.1    AXCN02001698    APCN01003267    GEDC01026535    JAS10763.1    UFQS01000794    UFQT01000794    SSX06949.1    SSX27293.1    GBHO01025009    GBRD01017224    GDHC01021800    JAG18595.1    JAG48603.1    JAP96828.1    GFDF01004878    JAV09206.1    CH902619    EDV37748.2    GANO01001468    JAB58403.1    CH477190    EAT48711.1    GGFJ01007201    MBW56342.1    GGFJ01007200    MBW56341.1    CH933808    EDW10839.1    GGFK01005922    MBW39243.1    GEZM01040489    JAV80838.1    OUUW01000001    SPP73380.1    GEMB01000053    JAS03056.1    AJWK01002519    GAMD01000944    JAB00647.1    CH479213    EDW33308.1    CH963894    EDW77139.1    GAMC01005394    JAC01162.1    ADMH02000597    ETN65707.1    CH954179    EDV56988.1    GDKW01001509    JAI55086.1    ACPB03002623    GAHY01001346    JAA76164.1    JRES01001578    KNC21825.1    GFTR01004907    JAW11519.1    GBGD01002232    JAC86657.1    AE013599    AGB93698.1    CH480838    EDW49178.1    CM000362    CM002911    EDX08536.1    KMY96322.1    M64643    AY089283    GFDG01002324    JAV16475.1    KA647591    AFP62220.1    GDAI01002518    JAI15085.1    AGB93697.1    CM000158    EDW92520.2    CH916367    EDW00639.1    CP012524    ALC41887.1    GAKP01002650    JAC56302.1    AJVK01035397    CM000071    EAL26566.2    GBXI01009444    JAD04848.1    CH940648    EDW60650.2    JXUM01020611    KQ560576    KXJ81840.1    GAPW01002254    JAC11344.1   
Pfam
PF13012   MitMem_reg        + More
PF01398   JAB
Interpro
IPR037518   MPN        + More
IPR000555   JAMM/MPN+_dom       
IPR024969   Rpn11/EIF3F_C       
IPR033858   MPN_RPN7_8       
PDB
5VHS     E-value=1.62988e-116,     Score=1072

Ontologies

Topology

Length:
330
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.8007
Exp number, first 60 AAs:
0.17694
Total prob of N-in:
0.06945
outside
1  -  330
 
 

Population Genetic Test Statistics

Pi
59.519279
Theta
71.511067
Tajima's D
-0.524142
CLR
256.92929
CSRT
0.234888255587221
Interpretation
Uncertain
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