SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01795
Annotation
PREDICTED:_uncharacterized_protein_LOC101742355_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.392
 

Sequence

CDS
ATGCACGTTAAAGTCCCAGATGTGAAGAAATGTTGTTTTTGCATTCCTTTACGGCGAGGGATACTTTTGTTTGGGATTGTAAATATTATTATATCCATCGTAGCTGTGTCGTTTCTAGTTATCACGACAGAGCTACACAGGTCAACGGCATTGAACGACAATACTATGGAGGTGACTACCTCTACTGTTCTCTTCAGTATCTTTGGAATGAGCATGATATTAAATATCTTGCTACTCGTGGCTGGATATCAGAAAGACATCTCAATGTTGCGTTTGTATAATTATTACGGCGTGGTCACTATATTCGCGGCATTGATCCCAACTTTCATGCTGCTCTCTCGGAAGATGGTTTTCAAAGTTTTGGCCGCCTTCATAGCTATAGCAATGCAAATTTACGTCATCATATTAGTGAGGAGTGAAATTGTCAAGCTAGAAAAGGCTCAAATAAAAATAGACGATGAAGTACCGCCGCCGTGTCCCGAGGAGGCTTTTGTTGATGCCGATACAGAAACTTTACTGTAG
Protein
MHVKVPDVKKCCFCIPLRRGILLFGIVNIIISIVAVSFLVITTELHRSTALNDNTMEVTTSTVLFSIFGMSMILNILLLVAGYQKDISMLRLYNYYGVVTIFAALIPTFMLLSRKMVFKVLAAFIAIAMQIYVIILVRSEIVKLEKAQIKIDDEVPPPCPEEAFVDADTETLL

Summary

Ontologies

Topology

Length:
173
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
87.06913
Exp number, first 60 AAs:
25.26729
Total prob of N-in:
0.99805
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  57
TMhelix
58  -  80
inside
81  -  91
TMhelix
92  -  110
outside
111  -  119
TMhelix
120  -  142
inside
143  -  173
 
 

Population Genetic Test Statistics

Pi
204.325121
Theta
159.993506
Tajima's D
0.909439
CLR
0
CSRT
0.63566821658917
Interpretation
Uncertain
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