Silkworm Genome Informatics Database

Gene

KWMTBOMO01790 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005999

Annotation

PREDICTED:_tetratricopeptide_repeat_protein_14_homolog_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr4(-):4664064-4676868 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.898 Nuclear Reliability : 2.785

CDS

ATGCCTCCATTTGAAACATTTCTGAATGTGGATAAAACAGCAAGATTAAGACACTTTTTTGATAATGTGAAGACTGGTGAGCTGATCATTGGAGCTGTAATCAACAGAACTGCGTCAGGGATGATGCTTAAGGTTCTTTGCACAGCAGGACCCACTTCCAGATATGTAGCCGACATTAATGTCAAGGCTTTTTTACCAGTAGGAAATATTATTCAAGCTGTTGACAAGAAAAATGTGTCAAGAAACTACCTGATGAATGACACTGTTTGCTGCGAAGTCATAGAAGTTATTCCAGATACAGACAAAATGGTTTGCGGCATGAAGGGTGTGACGCGAGGGCCCGATGATCCCCCGCCTAAGCCTCCGCTCGGCCTCCTGAGTACTGACGACTTCCCCTTGATCTACAAGAAAACCATGGATATGAAAGGAGAAAACTATGAAGCCATATTGGAGAAGAGCCCAGGCTTCAATAATCCCAACTGCATTCAATTCCTCTCTGAACATCTTGGCATTGCCAACATGCACTGCACAAATTTCTCATATTTGAGAGGAAGATTCGCTTCATCGGAATACGCAGATGAATTACGCCAAGCACAAGCAAGTAAATGGGCATTTCGTTCTGTGGCAGAAGGCATTGAACATTTTAAAGCTGGAAGACATTCTGAAGCATTTCAATGCTTGAATAAAGCTCTGAGCATAGATCCTAGAAATGTAGAGGGTCTTGTTGCTAGAGGAGCATTGTACGCCAATAGTGGAACATTCAAAAAGGCCATAGAAGATTTTGAGACCTCACTAAAGCTGAATCCAAATCATGCAAATGCAAGAAAATATTTGGGAGAAACATTGGTCGCACTAGGACGCAGTTATGAAGACGAGAACCAAATAACAGAAGCACAGAAAGCTTATGAAGATTGCTTAGCTATCATTCCTTTCCATGAGGAAGCTCAAAACTCGTTAGATTTTTTGAAAAGCAAGACCACTGCCTCAAAGCCCTTGATAGAGCCTGCAGAGTTATTACTGCCTGGCTTGACAGGGGCTAAGTCATATGAAATGAAGGAAACCCTGAAGCAGCTATTAAATTTGACAGAAAAAAAAGAAAAGAAAAAGAAGAAAAAGCGCGGTAAAGGCAAAAAGAAGCGTTCAAGCAGCTCATCATCGTCATCGAGTGACTCGTCCAGTTCTAGTTCCTCATCGGATTCATCATCTTCATCATCAGATTCGAGTGATTCAGAAAGTCCTCGGAAGAAGAAGCGTCGTTCTCAATCCAACAACAAAAGGCAGCGCTCTCTGTCACCGCTGAGCAAGCGCATGGCGATGCTCGGTGATGGTGATTCTACATCTCGGACTCACAATTCGCAATTCAACCATCCGTACGGATATCAGCCTCCAGTGCAAACCGCGGACGACATCGCCGCCCAGCCCCCGCCGCGGTCTCAGGCTGATATTGACTATGAGTTGAAGGTGCGCAAGTTCCTCGAGATGACCAAAGAAGATTCAGACTATGAAGAAAAAGTTCGTAACTTCCTCGCTGAAACAACGCAATACAAACGTAACCGCAAGATGCAAGAACTTGGCCAACAACAGCAGCCTCCAATGCCTGAACAAGAAAAGAAAAAGAAAAAGAAAAAAGACAAGAAAAAGAAGAAAGAATCCAAAAGGAAACGCAAAGAACAAGAAAAAGAAGATAAGAGAAAGGCTAAATTGGCACGAAACACAAACAATTCTGAATACACGATGCAGGAAATTGAAAATATTGGTGACAAGAAACTTAGAGATGCTTTGAGGAAAGAATTGAAAAGCAAGTCCAAGAGAGACCATAGTTCTGATGGAGAGTATGATAGAAAGCATAAGGACAGTAGAATTATGGAAGAAATGCAAGGATTAGAAGAGCTAGAATCAAAATTAAGCGCGTATCATGTGATGGTTGAAAAGGAGGTACTAGGGAAACGAGATGCAAGATCACCCAGTCTCGACCAAGTGCCGCCACCACCTCTCGACAAGCCTAAGTGGAAAATGTCTATGAATGCTGTAAAGGAAATGCCAAAGAAAAAAGAAAACTCTGCACCGAAGGGAGGATATAAAGAAAAATATGCATTTGAAGATAGCTCTGATGATTCCCACGAAAACTCTAAGATGCAGGAATCGAGCGGCGACAAGAATGTATCAGTGCGTCGCGCCATGGCCATGAAAGAACCTCCGCCACTGCCCGCTGCCCCACCGCCCGCCGATACCACACACCACCCCACGGTACGTAAAGGAAAGATAGTATTGGACAAGTTTGGGTCATTCCGTCTGGCTCGTGAGGGCGAGACACCGGTGTCTGTAGGCGACGGTCGTCCTGAACAATTCGTGACGCGCATCAAGCCGCCATCGCCGTCCGCTCGTCGCCCGCGCTCTCCGCCCTCACCGCGACGACGCTCTTCGCACTCATCCGACGACGATCGGAGATCTCCCAAACGTTCTAGAAGCAGGTCTCGCCCTCGCAAGTATCGCACGAGATCTCGTTCGCGGTCACGCTCAGGTTCCAGCGCAAGTGGCTCAGTGCCGTCTAGGCGTCGCCGGTCCGCTTCTCCACGATCTCGGTCCAGATCTGATGCCTCGAGATCATTCTACAGTCGTTCGAGATCAAGATCTGGGTCCAGGGAGAGGTACAACCGTCGAATTGGTCGTCGGGGTAATTGGCGTGGCAGGGGAGGCTTTGAAAGAGGCACGTACTACCGGCCGCGATTCAACGCGTATAACGGCGGTCCTCGTGGTCGCGGACGTGGCGACTTCCGTCGCGACGACGGCCGTAGATTCCCGGACCAGTGGCGAGACAATAGGAACCGGGGCGGAAGACCCTTCAGGCCGCGTAGAGGAGGTGGTGGTAGGGGACGCCCCTTTAGGGGTGGTGGTGGTTTCCGCGATTTCCGCGATCGTAGAGGACGATATTCGCGATCGCGCAGTCCTGACAGGACGCGCCGTTCCCGATCCTACAGTCCGGAGAGACGCGATAAAGATAGAGATAGTTATTCTCGCTTCTCTGCTGAACGTGACAGCCATCGCAGTGAGGGTGAATATGAAGAAGAAAGATACGTCGATAGGAAAGAATACGACGGAAAATGGGCGGATGGAAACGAACCAGAAAGAAACACCCAACAAGAAGAAAAGGCCCCAGAAGAATCTAAAGAGTAA

Protein

MPPFETFLNVDKTARLRHFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPTSRYVADINVKAFLPVGNIIQAVDKKNVSRNYLMNDTVCCEVIEVIPDTDKMVCGMKGVTRGPDDPPPKPPLGLLSTDDFPLIYKKTMDMKGENYEAILEKSPGFNNPNCIQFLSEHLGIANMHCTNFSYLRGRFASSEYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSLKLNPNHANARKYLGETLVALGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKETLKQLLNLTEKKEKKKKKKRGKGKKKRSSSSSSSSSDSSSSSSSSDSSSSSSDSSDSESPRKKKRRSQSNNKRQRSLSPLSKRMAMLGDGDSTSRTHNSQFNHPYGYQPPVQTADDIAAQPPPRSQADIDYELKVRKFLEMTKEDSDYEEKVRNFLAETTQYKRNRKMQELGQQQQPPMPEQEKKKKKKKDKKKKKESKRKRKEQEKEDKRKAKLARNTNNSEYTMQEIENIGDKKLRDALRKELKSKSKRDHSSDGEYDRKHKDSRIMEEMQGLEELESKLSAYHVMVEKEVLGKRDARSPSLDQVPPPPLDKPKWKMSMNAVKEMPKKKENSAPKGGYKEKYAFEDSSDDSHENSKMQESSGDKNVSVRRAMAMKEPPPLPAAPPPADTTHHPTVRKGKIVLDKFGSFRLAREGETPVSVGDGRPEQFVTRIKPPSPSARRPRSPPSPRRRSSHSSDDDRRSPKRSRSRSRPRKYRTRSRSRSRSGSSASGSVPSRRRRSASPRSRSRSDASRSFYSRSRSRSGSRERYNRRIGRRGNWRGRGGFERGTYYRPRFNAYNGGPRGRGRGDFRRDDGRRFPDQWRDNRNRGGRPFRPRRGGGGRGRPFRGGGGFRDFRDRRGRYSRSRSPDRTRRSRSYSPERRDKDRDSYSRFSAERDSHRSEGEYEEERYVDRKEYDGKWADGNEPERNTQQEEKAPEESKE

Uniprot

H9J907

Pubmed

19121390

EMBL

BABH01004776

Proteomes

UP000005204

PRIDE

H9J907

Pfam

PF13181 TPR_8

Interpro

IPR019734   TPR_repeat        + More
IPR011990   TPR-like_helical_dom_sf
IPR039190   TTC14
IPR013026   TPR-contain_dom

SUPFAM

SSF48452 SSF48452

Gene 3D

1.25.40.10

ProteinModelPortal

H9J907

PDB

1NA0 E-value=3.03049e-07, Score=135

KEGG

101741876 no KO assigned | (RefSeq) tetratricopeptide repeat protein 14 homolog

GO

GO:0005515 GO:0005524 GO:0006468 GO:0003774 GO:0016459 GO:0006810 GO:0006397 GO:0004651 GO:0005634

PANTHER

PTHR23184

Length:

1057

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00469

Exp number, first 60 AAs:

0.00444

Total prob of N-in:

0.00021

outside

1 - 1057

Pi

251.278385

Theta

211.078186

Tajima's D

0.655171

CLR

0.554234

CSRT

0.55607219639018

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
26280517	TGYKNNVVIYRPK	100.00	1e-14
26280517	NTIIATGGTGR	100.00	5e-06
26822097	FASSEYADEIR	100.00	5e-06
26280517	EGAGPHNWGTIKDDIDEINK	100.00	5e-06
28467696	EGETIESGIHYHVER	100.00	5e-06
27530593	KIPAQATLLNENGMNDSSDDEDVPDKS	100.00	1e-04
27530593	KTDETIEEPEEEEEEEASDEGATVPRK	100.00	1e-04
27530593	KALYDDDFGDSDTEKEPDAYLERV	100.00	0.001
27530593	RHNTFTDAWSDEESDAEFTDGDVGRL	100.00	0.001

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics