SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01777
Annotation
PREDICTED:_protein_Hook_homolog_1-like?_partial_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.816
 

Sequence

CDS
ATGGAATACATCATTTTAAAATTAACTGAAGAGGTTGTAGCTCGCAATCACAAGATTATAATATTAGAGAATCATATCAATGAGGTTGAAGACGAAGTCAGAAGATTGCAAGTATGCGTAAGTGATGCTATAATTGCTGGAGAACAAATTAGAGAAAACAGTATTCAGAAAATCGATGAATCTGTCAAAGCAGTACATGCACACCATTCCAAAGCTACTCACAACATAAGAATGGAACTTGATAAATTGAAAAATGAGAACATTTTACTAGAGCAAAAATTATCGAATACAAAATTAGATTACTCAGATTCATTCAATAGCAGGAATGAAATATTATCAAATATGAATCGTCTTCAAAATGACAATGAAATAATTATTACCGATATTAAACAAATAGAATTGGAATATATTGGTGACAGTGAATTATCACCTGAAAAGTGTGATGCAGTAGACGTTTTACATTCATTGGAAAGGATCCGTAATTATATGGAAACAAAAAAATCTAAAAACATAATTTTAGAGCAAACTTTACTAAAAGTCCAATCATCTTCGCAGTTGCTACTCTGTAAAGCAGATGAAGGAAAGAGAATAGTCGAAGTTGAAAAACAAAAGATCATAACTGAAAAGGAGGAAGCTATAAAGCAAAGACAAGATTTAGAAGCAAGTCTTTTAGATTTAAAGCAGAAGTTAGAAAAACAGATTTCCACGGATCAAGATGTAATAAAAGATTTAGAAGCAGAAATTTTAAACAAAGATCTCATTATTAATAACATAAATAAGTCTACAGAAAGTTATATAACAGAACTTAAAAATGATATAAATTCATGGCAAGAACTCTATGAAAATGCAACACGAGAATTAAAACATTTACAAGAGCAATTACAAAGCATTTCAGATGAAAATAATAAATACTTTCAAGAAATTATGACAGCAAATAAACAATTAGAGGTAAAAAGCAAAGAGATTTCAAGTCTTCAAAAATCTTTAGAAGACATACAAAATCAAACAAGTCATTTTATTGAAGTAAATAATTTAAAATTAGAAGAAAAATCCGAAGAAATTGCTGAGCTACAAAAGACGATTGAAAAAATAAAAAATCGCTCCTTCACATGTATTGGAACAAATACATCTGGTATAAATTTAGTACGTGACGACAATCTAGAAATAAAACAAGATAAAGCCCAACAAGTGGATGGAAACGTTAACATCAACATCAAAGAAAATCGTGATAGAACAGCCTTGGAGAAATTATTTTATGAACGTTCTTATCAAAAATTACAAACTTTAAAGGCCATTCAGGTCACAAACATAAGTGTACAACCAAAATTTGATGCTCGTAATTATTCAAACTATAAATCTGAGAAATCTGTGATTGACGAAACATCTCTAATTGACATAGTGGAAAGTGAAAATACTTCAAAAGACAATGGCCCTAACAAATCTGTTGTAAATCTACAAAGAAAGGTATCGAAGCCCCTGAATTACAACGATACATCAAAAAATAGTTCTTCTTTAGATATACAGCCTGTGAAACATATTATCAATGATATAGAAAATACAGCAGATTTTAAAAATAATTACGAAAGTGAAATTAAAATTAACGACATTGAACAAAATGATGAGACAAAAAGAAAAATACCGGAATCTGTTCATTCAACTGATATGTTTATTGTATACAAAAGTAGTGAAACTGATACTCCTAGTACGGGAAGGTCCAAAGAACCAACTTCTTGGCCACACCACTATAATTCCGAAGTAGTAGAAACTTTAAAAATCCATCCTAAAAACCAGAACACAGCTGACTATCGTTCTAGAAAACGTGAACCAAGCACGAATACACAGACTAATGAAAATATAGGTACCAAACGTGGTATTAATGTGAAGTTGCCTCGTGTTGAACTAATAAACTCATCGCAGTCATTGTCCCTGAAAAGTGAAACAAGTTCTTCAGATACATTTCATATGGCAAAACCTTCGGAAACGACATTCTTAAATTCAGAGGCTATCGAAAAACCTCAAAAGACAGAACTCGAACCATCTAACAGTGATCAAGAAAAAGTGAATTCTATTTTTGATAGTATTTATTCCGAAAACTATCAAAACAATATAAAAAAGAGTAATATCAGCGGCCAAACAATCTCATTGGCCAATGATACCGAAACTCTAAATGTGACTTCTAGACCTAATAGCTCCGATCTGGCAGTAAATCCTTTAAACAATAATCTTCAAACAAAGTCTAAATCGAAAAAATCCGCACAAAATGAATTGAGAACTAAAATCGCATTAAACTATGTTCTCGATACAATTGAACTAGACAGAAATCTTAGGAATACCGATAACGAAAATTCATATTCCACAAGGAAAACTCAAAGTGCTTCTATAGTAAGCTTCTCTTTATTAGATTTCAATGATGAAAGCAATCTTTCTTCAGTTAGTTCTCGTAATGGAATTAAAACTATGGCTCATAACCTCTCTAAAAATCAATTTCTTAAGTTCAAAGACCAGGGAGTATTGGTAAGACTGGATAATTATGAAAAATACGAGCAAGAAATTGATGCATTAAAGAAAACATTAAAAAACACGGAAGAGGACTTTAAAAAGAAACTTGACGCTTTAAAACTGCAATACGATAACAACATAAAGAATATTAAAAAAGAGCACGACAATGGAGTTAATAATTTACAAAATCTACACGAAGAGACGTTGCATGATATTATTAAAATACGCGAAAATGAAATTGAGAACTTAAGGACATTAAGTATTGAAGCAATGAAGAAGGCAGACAAACTAGAGAAGGACAATAGTTTGCTAAAACATCAGGAGCAGTATAACGGTCTAGCTTGTTTCGACGAGGATCAGGAGGTTCCTTCAGAATCCAATAGTCAAAAAAACACACGACTTCAACGAAAAGTTCTCACGCAGACTAATGTCGAAGCGTTTGACGTGAAGCCAAAAACACGTATACATGGCCCTTGTACATGCAGCTTGGATGTGAACATGTCCGATACTATACGAAATATATTTCAGCAAGTTGACAATGATCAAAGGAAATTGGCCGAGCGCACGTATCTAAAATACATTTTGAACAAAATTTTAAATGACAGCGTAAAGGTAAACTTCTTTGTCTTTGATCTCTATTGTTCTAAATCTACTTAG
Protein
MEYIILKLTEEVVARNHKIIILENHINEVEDEVRRLQVCVSDAIIAGEQIRENSIQKIDESVKAVHAHHSKATHNIRMELDKLKNENILLEQKLSNTKLDYSDSFNSRNEILSNMNRLQNDNEIIITDIKQIELEYIGDSELSPEKCDAVDVLHSLERIRNYMETKKSKNIILEQTLLKVQSSSQLLLCKADEGKRIVEVEKQKIITEKEEAIKQRQDLEASLLDLKQKLEKQISTDQDVIKDLEAEILNKDLIINNINKSTESYITELKNDINSWQELYENATRELKHLQEQLQSISDENNKYFQEIMTANKQLEVKSKEISSLQKSLEDIQNQTSHFIEVNNLKLEEKSEEIAELQKTIEKIKNRSFTCIGTNTSGINLVRDDNLEIKQDKAQQVDGNVNINIKENRDRTALEKLFYERSYQKLQTLKAIQVTNISVQPKFDARNYSNYKSEKSVIDETSLIDIVESENTSKDNGPNKSVVNLQRKVSKPLNYNDTSKNSSSLDIQPVKHIINDIENTADFKNNYESEIKINDIEQNDETKRKIPESVHSTDMFIVYKSSETDTPSTGRSKEPTSWPHHYNSEVVETLKIHPKNQNTADYRSRKREPSTNTQTNENIGTKRGINVKLPRVELINSSQSLSLKSETSSSDTFHMAKPSETTFLNSEAIEKPQKTELEPSNSDQEKVNSIFDSIYSENYQNNIKKSNISGQTISLANDTETLNVTSRPNSSDLAVNPLNNNLQTKSKSKKSAQNELRTKIALNYVLDTIELDRNLRNTDNENSYSTRKTQSASIVSFSLLDFNDESNLSSVSSRNGIKTMAHNLSKNQFLKFKDQGVLVRLDNYEKYEQEIDALKKTLKNTEEDFKKKLDALKLQYDNNIKNIKKEHDNGVNNLQNLHEETLHDIIKIRENEIENLRTLSIEAMKKADKLEKDNSLLKHQEQYNGLACFDEDQEVPSESNSQKNTRLQRKVLTQTNVEAFDVKPKTRIHGPCTCSLDVNMSDTIRNIFQQVDNDQRKLAERTYLKYILNKILNDSVKVNFFVFDLYCSKST

Summary

ProteinModelPortal
PDB
3JBH     E-value=0.0227067,     Score=93

Ontologies

GO

Topology

Length:
1051
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00081
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1051
 
 

Population Genetic Test Statistics

Pi
206.552402
Theta
192.20835
Tajima's D
0.39104
CLR
1.142567
CSRT
0.48267586620669
Interpretation
Uncertain
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