SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01776
Pre Gene Modal
BGIBMGA006149
Annotation
PREDICTED:_lipase_3-like_[Amyelois_transitella]
Full name
Lipase      
Location in the cell
Mitochondrial   Reliability : 1.656
 

Sequence

CDS
ATGTTTAGATATTTTATAACGACAATCTTAGTTTTCTCTTCTAATTACTGCTATGCAGAAATATCAGATGAAATCTTTTATAGAAATATTCAGAGGATCACTGATCCAAGTATACTGGAAGATGCGCGTTTAGATACGTTCACATTAATCCGTAAATACGGCTACCCGTGCGAAATACACAGAGTATACACAGAAGATGGATACATATTGGAAATGCATAGAGTACCTAACGGCAAATACAACGCGAAAAAAGGCCCCAAGCCGGTTGTGCTCCTACAGCATGGACTACTGTCGTCCTCTGCGGAATGGGTGCTTATGACCCCCGGGAAAGGTTTAGCATACATCTTAGCTGAAATCGGATATGACGTCTGGATGGGAAACGCTAGAGGAAACACGTATTCTCGTCATCACAAATCCTTAGTGGCCACTTCCTCGGAGTTTTGGAAATTCAGCTGGCACGAAATAGGTTACTACGACCTGCCCGCAATGATAGACTACGTCATCAAAGAAACCGGTGCACCTAAAATTCAGTATATTGGATTCTCTCAGGGCACCACAGTGTTCTGGGTGATGACGTCCACTCGGCCGGAATACAACGACAAGGTTTCGGCTATGCAAGCTTTAGCCCCGGTCGTGTATCTACGAAACGTGAGGAGCCCTCTTGTGAAGGCCATTGCTCCATTTACGAACACTTTGGAAATAATATTCAAGTTATTAGGAAAAAACGAGCTATTACCGAACGGCAAAATTAACGAACTTGCCGGACAAACTGTATGTGTTGAGGAAGCTATCACGCAGTTCCTTTGTACGAATCTACTGTTCCTAGTCTGTGGTTTCAACGAGGAGCAATTGAATAAAACAATGCTGCCAGTAGTGATGGGTCACACTCCAGCGGGCTCATCCACAAGGCAATTCGTACATTTCGGTCAGATTTACAAATCCGATGAGTTCTTACAATTCAATCACGGGTGGATAAAGAACAAATTCGTTTACGGTACATTTAGACCGCCCGCATACAATCTGAGCGCGATTCGGACACCTGCATTCCTTCACTACGCTGACAACGACTGGTTGTCGACACCGAATGACGTCCATAGACTATCAAGATCCTTGAAATCCGTCGTCGGCAAGTTCAAAGTACCCATGCCAGAATTCAATCATTTAGATTTCGTTTTTGCCATCAACGCAACGAATTACATATACTCTAGATTAATAAACATAATGGAACAGTTCAAGTAG
Protein
MFRYFITTILVFSSNYCYAEISDEIFYRNIQRITDPSILEDARLDTFTLIRKYGYPCEIHRVYTEDGYILEMHRVPNGKYNAKKGPKPVVLLQHGLLSSSAEWVLMTPGKGLAYILAEIGYDVWMGNARGNTYSRHHKSLVATSSEFWKFSWHEIGYYDLPAMIDYVIKETGAPKIQYIGFSQGTTVFWVMTSTRPEYNDKVSAMQALAPVVYLRNVRSPLVKAIAPFTNTLEIIFKLLGKNELLPNGKINELAGQTVCVEEAITQFLCTNLLFLVCGFNEEQLNKTMLPVVMGHTPAGSSTRQFVHFGQIYKSDEFLQFNHGWIKNKFVYGTFRPPAYNLSAIRTPAFLHYADNDWLSTPNDVHRLSRSLKSVVGKFKVPMPEFNHLDFVFAINATNYIYSRLINIMEQFK

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
Feature
chain  Lipase
EMBL
NWSH01005801    PCG63937.1    ODYU01012460    SOQ58781.1    AGBW02009374    OWR50972.1    + More
KQ460855    KPJ11879.1    KQ459601    KPI94007.1    BABH01004735    BABH01004736    BABH01004737    BABH01011980    NWSH01000114    PCG79409.1    GAMC01007031    JAB99524.1    GFDF01005639    JAV08445.1    GFDG01000330    JAV18469.1    GFDG01000334    JAV18465.1    GFDG01000331    JAV18468.1    GFDG01000332    JAV18467.1    PCG79406.1    JXJN01010106    CH940649    EDW64196.1    KQ461190    KPJ07151.1    JF999959    AFI64313.1    KQ459590    KPI97395.1    JRES01000842    KNC27786.1    ATLV01011799    KE524723    KFB36142.1    KPI97391.1    KA647607    AFP62236.1    KPI97393.1    APCN01002227    AAAB01008820    EAL41497.4    GFDF01002510    JAV11574.1    KRF81490.1    KPJ07150.1    CM002910    KMY89574.1    CH480818    EDW52462.1    AXCN02000090    KPI97394.1    GAKP01013224    JAC45728.1    AE014134    AY089586    AAF52971.1    AAL90324.1    GBXI01014562    JAC99729.1    GFDF01005642    JAV08442.1    GFDF01005643    JAV08441.1    OUUW01000006    SPP81787.1    GFDF01005647    JAV08437.1    AGB92891.1    CH954177    EDV59018.1    GFDF01005646    JAV08438.1    CH379061    EAL33105.2    ADMH02002130    ETN58534.1    KMY89575.1    CM000157    EDW87954.1    ADV37035.1    CH479189    EDW25473.1    SPP81788.1    KQS70596.1    KPJ07153.1    CH963857    EDW76558.1    KRT04741.1    GAMD01001453    JAB00138.1    ODYU01004000    SOQ43434.1    CH902620    EDV32370.2    KRJ97507.1    GFDF01005644    JAV08440.1    EDW76544.2    GDHF01006507    JAI45807.1    GFDF01005645    JAV08439.1    KRF98484.1    KQ971338    EFA01616.1    EDV32387.1    DS231848    EDS36642.1    CH477866    EAT35491.1    CP012523    ALC38094.1    CH933807    EDW12736.1    KK852794    KDR16428.1    EDW25486.1    NEVH01009768    PNF32784.1    KPJ07152.1    BT003518    AAF52985.2    AAO39522.1    EAL33110.2    CM000361    EDX04580.1    KMY89593.1    EDW52477.1    EDV59003.1    CH916368    EDW03599.1    SPP81772.1    KPU73921.1    EDW87967.1    EDW03611.1    GDHF01010028    GDHF01008682    JAI42286.1    JAI43632.1   
Pfam
PF04083   Abhydro_lipase        + More
PF00561   Abhydrolase_1
PF12146   Hydrolase_4
Interpro
IPR006693   AB_hydrolase_lipase        + More
IPR025483   Lipase_euk       
IPR029058   AB_hydrolase       
IPR000073   AB_hydrolase_1       
IPR022742   Hydrolase_4       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
1K8Q     E-value=4.43208e-71,     Score=681

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.957985
 
 
Length:
412
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.30558
Exp number, first 60 AAs:
0.05913
Total prob of N-in:
0.00826
outside
1  -  412
 
 

Population Genetic Test Statistics

Pi
232.951927
Theta
170.134661
Tajima's D
1.628932
CLR
0.254702
CSRT
0.814859257037148
Interpretation
Uncertain
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