Silkworm Genome Informatics Database

Gene

KWMTBOMO01775

Annotation

PREDICTED:_zinc_finger_protein_131-like_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr4(-):4425863-4430398 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.58 Nuclear Reliability : 2.154

CDS

ATGGCAAATCAAGAAATAAGTTTGAAATGGAACGGTTATCAGAGTAACATATTGACAAATGTGAAAGAACTTTATAGAGATGAAGGGTTATCCGATGTTACTTTGGTTTCGGATGGGCAGTGTTTTAAAGCTCATAAAGTGATACTATCAGCAAACAGTTCCGTTTTCAAATCAATATTTCAGCAAAACCCCCACAAAGATCCGATTATAGTGCTACATGATATCAACACAGCCTCATTAAAGACTTTGTTGACGTTTATGTACAATGGCGAAGTTAACGTGACTGAAGAATTCCTTCCTATTTTATTGAAGACTGCTGAAATATTGAGGGTATGTGGTCTGTCCACTGGGAGTGAAGCTGCCACCAAAGATGATGAGAAATCGGCTGGACCAGTACAACCAAAAAAACGCAAGAAAAGTGAACATGAAGATAATAATAATAAATGCAAGAAAATTTCTACAAAAGTCGAGACTCCACCTAATACAAGTATTACAATAGATGCATCAAACACTTCTAATGTTGTCTTAAAAGTGGAACCAATTGATTCACCCCTCACCGATTATTCCGGAGATAATACTAATGACACCGACATTGCTTTACTTGAAGAGACAGAGAAAAAATATTGTATCAATAGTGAAATATCAACAAAATCAGTTTGTACTACAGGACCTAATAATCGTAACATTAAAAAATGGATAAGTGAAGTTAGCAGTACGCAACCCAGTTTGAATTCTAATGACAAAAATACAGTTAGCACTGAAGATGACAAAGATAGTTTGGAGATTGATAAAGAAGTTGAAACCGTTCTTCAAAGTGGAACAATAGTAGAATCATTAAGTATTACGACTGAGAATTTGAATGTGGTTTCTAGTGAGGCTCAAAATTGTAAAGATAAAAGTAACACCTGTTATGCGAATCCTTCATTTCCTTGTCCGTTTTGTCCACGAGTCTACAACAGTTGGGGATATCGAAGGAGACATGTCAAATCTAGGCATCTCACTAACAAATTGTCATGTAAATGGTGCGTGTCGGTACTGGCGTCGACCGGCGCGTGGTACTCGCACGCGACCAGAGCACACGGCGTCCCGCACGAGGAGGCGCGGAACTCGCTGGTGGTGATGGTGGAAGCCCACGCCGTGCTCACCATGAACGAACCCAGCGTGACGCAGCTGCTGGGCCAGGTCAGCATGGACGGCAGCGTCAGCGACAAAAGCACATAG

Protein

MANQEISLKWNGYQSNILTNVKELYRDEGLSDVTLVSDGQCFKAHKVILSANSSVFKSIFQQNPHKDPIIVLHDINTASLKTLLTFMYNGEVNVTEEFLPILLKTAEILRVCGLSTGSEAATKDDEKSAGPVQPKKRKKSEHEDNNNKCKKISTKVETPPNTSITIDASNTSNVVLKVEPIDSPLTDYSGDNTNDTDIALLEETEKKYCINSEISTKSVCTTGPNNRNIKKWISEVSSTQPSLNSNDKNTVSTEDDKDSLEIDKEVETVLQSGTIVESLSITTENLNVVSSEAQNCKDKSNTCYANPSFPCPFCPRVYNSWGYRRRHVKSRHLTNKLSCKWCVSVLASTGAWYSHATRAHGVPHEEARNSLVVMVEAHAVLTMNEPSVTQLLGQVSMDGSVSDKST

Uniprot

A0A194PSA7 A0A194R3Q9 A0A212FB78 A0A1E1WM30 A0A2H1X0J9 A0A0L7K4X1 + More
A0A158NDP1 A0A1Y1NDE6 C7F7T8 C7F7T1 A0A1Y1NDC4 A0A151IA32

Pubmed

26354079 22118469 26227816 21347285 28004739 19349644 + More

EMBL

KQ459601 KPI94010.1 KQ460855 KPJ11875.1 AGBW02009374 OWR50973.1 + More
GDQN01002990 JAT88064.1 ODYU01012460 SOQ58782.1 JTDY01011245 KOB57245.1 ADTU01012732 GEZM01005821 GEZM01005820 JAV95891.1 GQ338173 GQ338180 ACU12200.1 ACU12207.1 GQ338166 ACU12193.1 GEZM01005819 GEZM01005818 JAV95893.1 KQ978255 KYM95883.1

Proteomes

UP000053268 UP000053240 UP000007151 UP000037510 UP000005205 UP000078542 + More

Pfam

PF00651   BTB        + More
PF02892   zf-BED
PF00096   zf-C2H2

Interpro

IPR013087   Znf_C2H2_type        + More
IPR000210   BTB/POZ_dom
IPR011333   SKP1/BTB/POZ_sf
IPR036236   Znf_C2H2_sf
IPR003656   Znf_BED

SUPFAM

SSF54695 SSF54695 + More
SSF57667 SSF57667

ProteinModelPortal

A0A194PSA7 A0A194R3Q9 A0A212FB78 A0A1E1WM30 A0A2H1X0J9 A0A0L7K4X1 + More
A0A158NDP1 A0A1Y1NDE6 C7F7T8 C7F7T1 A0A1Y1NDC4 A0A151IA32

PDB

5N1X E-value=5.92582e-07, Score=128

KEGG

101740753 no KO assigned | (RefSeq) uncharacterized LOC101740753

GO

GO:0003676 GO:0003677 GO:0005515 GO:0046872 GO:0006468 GO:0003774 GO:0016459 GO:0006810 GO:0006397 GO:0004651 GO:0005634

Length:

406

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01068

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01062

outside

1 - 406

Pi

197.08949

Theta

166.258866

Tajima's D

1.085402

CLR

0

CSRT

0.683965801709915

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics