SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01771
Pre Gene Modal
BGIBMGA006146
Annotation
WNT_[Helicoverpa_armigera]
Full name
Protein Wnt       + More
Protein Wnt-1      
Location in the cell
Nuclear   Reliability : 2.182
 

Sequence

CDS
ATGGACCCGGCGGTTCACGCTACGCTAAGAAGAAAACAAAGAAGATTGGCCAGAGAGAACCCAGGAGTTTTGGCCGCAGTCGCCAAGGGCGCCAGTATGGCGGTCGCGGAGTGTCAACACCAATTCAAGTATAGAAGATGGAACTGCTCCACGAGAAACTTTCTAAGGGGCAAGAACTTGTTCGGAAAAATTGTGGATAGAGGTTGCCGTGAGACCGCCTTCATCTACGCTATAACGAGCGCCGGAGTAACCCACTCCGTGGCCCGCGCCTGCGCCGAGGGCTCCATAGAATCGTGCACGTGCGACTATTCGCACATCGACCGCGTGCCGCACAGAACCCGGTCGGCGGCCGCGGCCAACGTGCGCGTCTGGAAGTGGGGCGGCTGCAGCGACAACATCGGCTTCGGATTTCGCTTCAGCAGGGAGTTCGTTGATACCGGAGAACGAGGCAAGACTCTAAGGGAGAAAATGAACCTGCACAACAACGAAGCCGGCAGAGCGCACGTGCAAACGGAGATGAAGCAGGAGTGCAAGTGCCACGGCATGTCAGGCTCGTGCACCGTGAAGACTTGCTGGATGAGGCTGCCGAGCTTCAGGTCGGTGGGTGACTCGCTGAAGGACCGGTTCGATGGCGCGTCACGCGTGATGCTGTCGAAGGCGGAGCTCGAGACGCCGGCGCAGCGCAACGAGGCGGCGCCGCACCGGGTGCCGCGCAAAGACCGGTACCGGTTCCAGTTGCGGCCGCACAATCCGGACCACAAGTCGCCCGGGGTCAAAGACCTCGTCTACCTGGAATCGTCGCCGGGATTCTGCGAAAAGAATCCGCGTCTAGGCATCCCCGGCACGCACGGCCGCGCCTGCAACGACACTAGCATCGGCGTGGACGGCTGCGACCTGATGTGCTGCGGCCGCGGCTACAAGACAAACACGATGTTCGTGGTTGAGAGATGCAACTGCACGTTCCATTGGTGTTGCGAGGTCAAGTGCAAACTGTGTCGTACGGAAAAAGTGGTGCACACGTGTTTATAG
Protein
MDPAVHATLRRKQRRLARENPGVLAAVAKGASMAVAECQHQFKYRRWNCSTRNFLRGKNLFGKIVDRGCRETAFIYAITSAGVTHSVARACAEGSIESCTCDYSHIDRVPHRTRSAAAANVRVWKWGGCSDNIGFGFRFSREFVDTGERGKTLREKMNLHNNEAGRAHVQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGDSLKDRFDGASRVMLSKAELETPAQRNEAAPHRVPRKDRYRFQLRPHNPDHKSPGVKDLVYLESSPGFCEKNPRLGIPGTHGRACNDTSIGVDGCDLMCCGRGYKTNTMFVVERCNCTFHWCCEVKCKLCRTEKVVHTCL

Summary

Description
Ligand for members of the frizzled family of seven transmembrane receptors.
Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein.
Ligand for members of the frizzled family of seven transmembrane receptors (Probable). Acts in the canonical Wnt signaling pathway by promoting beta-catenin-dependent transcriptional activation (PubMed:25451226). Developmental protein that promotes cell proliferation in the developing spinal cord (PubMed:25451226). Has a role in osteoblast function, bone development and bone homeostasis (By similarity).
Ligand for members of the frizzled family of seven transmembrane receptors. Acts in the canonical Wnt signaling pathway by promoting beta-catenin-dependent transcriptional activation (By similarity). Plays an essential role in the development of the embryonic brain and central nervous system (CNS) (By similarity). Has a role in osteoblast function, bone development and bone homeostasis (By similarity).
Cofactor
Zn(2+)
Subunit
Forms a soluble 1:1 complex with AFM; this prevents oligomerization and is required for prolonged biological activity. The complex with AFM may represent the physiological form in body fluids (By similarity). Interacts with PORCN (PubMed:25451226).
Similarity
Belongs to the Wnt family.
Keywords
Complete proteome   Developmental protein   Disulfide bond   Extracellular matrix   Glycoprotein   Lipoprotein   Reference proteome   Secreted   Signal   Wnt signaling pathway  
Feature
chain  Protein Wnt
EMBL
BABH01004718    BABH01004719    NWSH01000422    PCG76506.1    KU640201    APR72350.1    + More
ODYU01000848    SOQ36227.1    KJ206240    AHN95659.1    AGBW02011632    OWR46374.1    D14169    KQ460855    KPJ11870.1    JTDY01001064    KOB74987.1    KQ459601    KPI94016.1    AK404816    BAM20310.1    KP245731    ALC76151.1    DS231927    EDS27053.1    PCG76505.1    GDUN01001120    JAN94799.1    APCN01001776    CH477197    EAT48350.1    CH477689    EAT37259.1    AAZX01007301    AAZX01009629    AAZX01015180    AXCN02000684    KJ680328    AHY30856.1    KC311252    AGG14205.1    ATLV01026998    ATLV01026999    KE525421    KFB53739.1    GBYB01002533    JAG72300.1    KZ288367    PBC26820.1    KQ434899    KZC10927.1    ADTU01012750    ADTU01012751    ADTU01012752    ADTU01012753    ADTU01012754    QOIP01000002    RLU25651.1    KQ981906    KYN33306.1    ACPB03014836    KK107578    EZA48658.1    GBHO01016635    JAG26969.1    GDHC01014138    JAQ04491.1    DS235107    EEB12053.1    UFQS01000004    UFQT01000004    SSW96789.1    SSX17176.1    KK854927    PTY19735.1    KQ977600    KYN01512.1    KM264384    AKE98364.1    GEZM01064057    JAV68841.1    LC373549    BBD17792.1    KQ976424    KYM88337.1    KQ981082    KYN09738.1    GL435626    EFN72921.1    L42142    AAB46368.1    AY101372    AAM33138.1    KQ982254    KYQ58811.1    AY101369    AAM33135.1    AB044713    BAB19660.1    AB465516    GDIP01156146    LRGB01000512    BAJ05334.1    JAJ67256.1    KZS18493.1    GL732530    EFX86386.1    AY101370    AAM33136.1    KT818597    ALL53296.1    KQ971342    EFA04660.2    AY101371    AAM33137.1    GDIP01010526    JAM93189.1    AAAB01008980    EAL39184.3    NEVH01004401    PNF39873.1    GL767051    EFZ14267.1    GL445900    EFN88870.1    CVRI01000037    CRK93523.1    LJIJ01000640    ODM95646.1    LNIX01000001    OXA61956.1    GDIQ01198661    JAK53064.1    AB439847    BAI79509.1    JH431262    KP013754    AKU77017.1    LN899787    CUS58512.1    ABJB010414227    ABJB010433212    ABJB010570271    ABJB010696084    ABJB010698419    ABJB010786141    ABJB010860670    ABJB011023140    ABJB011047525    ABJB011133600    DS797003    EEC10450.1    AJ315945    CAC87040.1    MH021973    AVR59260.1    MF416108    AXN72346.1    AB167808    BAD12586.1    AHAT01032561    JARO02009344    KPP61738.1    AADN05001526    AGTO01001701    KQ759375    X81693    AY655699    AY753286    X55270    ABQF01082430    LMAW01003082    KQK74139.1    KL447364    KFO72606.1    MUZQ01000571    OWK50301.1    LSYS01005895    OPJ76203.1    AFYH01001812    AAGJ04137089    AAGJ04137090    AWGT02000177    OXB74539.1    AAEX03015075    AKHW03004280    KYO30157.1    GCES01012526    JAR73797.1    MKHE01000003    OWK16980.1    KQ423077    KOF73635.1   
Pfam
PF00110   wnt        + More
PF01400   Astacin
Interpro
IPR005817   Wnt        + More
IPR018161   Wnt_CS       
IPR024079   MetalloPept_cat_dom_sf       
IPR001506   Peptidase_M12A       
IPR006026   Peptidase_Metallo       
IPR009139   Wnt1       
Gene 3D
PDB
6AHY     E-value=2.75717e-68,     Score=656

Ontologies

Topology

Subcellular location
  
Secreted  
Extracellular space  
Extracellular matrix  
Length:
342
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.24928
Exp number, first 60 AAs:
0.23753
Total prob of N-in:
0.02975
outside
1  -  342
 
 

Population Genetic Test Statistics

Pi
196.521465
Theta
181.544555
Tajima's D
0.084382
CLR
0.89968
CSRT
0.392180390980451
Interpretation
Uncertain
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