SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01770
Pre Gene Modal
BGIBMGA006145
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_protein_Wnt-4_[Bombyx_mori]
Full name
Protein Wnt       + More
Protein Wnt-4      
Alternative Name
dWnt-4
Location in the cell
Mitochondrial   Reliability : 1.488
 

Sequence

CDS
ATGCGTGGTAGTAATGTTCTATCGTTGTTGATTTTGTGTGCCGTTTCTATACCAGCCACGAAAAATGTTAATGGATCGCAACCAATTCTACAAAAGACGATTGAAGCTCTTTTCAGTGATCGCTCGAACATAATCTACCCGGGTTCATGTAAATTGTTTATAGCCTCGAAACGACAAGCGAAAATCTGTACGAGAGAAAAGAAATTTTTCGAGATTTTGACGAACGCGAAGAAACAGGCCATCAGCGCCTGCGAAGAGAGCTTCCAGTACGACAGATGGAACTGTTCACTAATATACAATGGGAAGGCGAAAAAGAGAATTTTTAACAAAATCTATAGAGAGACCGCTTTCATTCACGCCCTGCTGGCGGCATCGTTGACTCATGCGGTCGCGAAAGCCTGCGCTTCCGGAGAGCTGAAGAGCTGCTCATGCGTCGGTAGCTACAGAAAGAACACCACATGGAAAGTCAACGGGTGCGGCGACGACTTCAAGCAAGGCAAGAGAATGATGAAGAACTTTCTGGATTTCAATCACGCCGGCAACGACCAAATCGCTGAAACATTAAAACAAGATGTGATGATTGGTGTTGACTCCATCGGAGAGCAGATGAGGGAGGTGTGTAAATGCCACGGTTTTTCCGGTTCCTGCACAACGAAGACTTGCTGGAAGCGACTGGGGCCGTTCAACTCTGCCATGGGATTGTTAAAGAAGCACTACCATCATGCCGTGAAGAAGAAGCTATTGAATTACACGACCAAAAGAGCTATAACACCGCAAGCTAAGAAGAAAATGAAATCTGACGAGAAATACCTGGTTTATCTGCAGAAGACTCCAAATCTGTGCGTTTGGACCAAAGGTAGAACGTGTAAGAACAGACATAATTGTGCCACGCTGTGTTGCGGGAGGGGCTATTTGACTACCAAGAAGAATGTGACGTCGCGGTGCAAATGCAGGATGGTGAATTGTTGTTTCGTTGAGTGCGATACTTGTGTTAAAGAAGCGGAAATATTCACGTGTAAATAA
Protein
MRGSNVLSLLILCAVSIPATKNVNGSQPILQKTIEALFSDRSNIIYPGSCKLFIASKRQAKICTREKKFFEILTNAKKQAISACEESFQYDRWNCSLIYNGKAKKRIFNKIYRETAFIHALLAASLTHAVAKACASGELKSCSCVGSYRKNTTWKVNGCGDDFKQGKRMMKNFLDFNHAGNDQIAETLKQDVMIGVDSIGEQMREVCKCHGFSGSCTTKTCWKRLGPFNSAMGLLKKHYHHAVKKKLLNYTTKRAITPQAKKKMKSDEKYLVYLQKTPNLCVWTKGRTCKNRHNCATLCCGRGYLTTKKNVTSRCKCRMVNCCFVECDTCVKEAEIFTCK

Summary

Description
Ligand for members of the frizzled family of seven transmembrane receptors.
Binds as a ligand to a family of frizzled seven-transmembrane receptors and acts through a cascade of genes on the nucleus. Acts downstream of homeotic complex genes in the visceral mesoderm and is required for embryonic segmentation. Also required for cell movement and FAK regulation during ovarian morphogenesis.
Similarity
Belongs to the Wnt family.
Keywords
Complete proteome   Developmental protein   Disulfide bond   Extracellular matrix   Glycoprotein   Lipoprotein   Reference proteome   Secreted   Signal   Wnt signaling pathway  
Feature
chain  Protein Wnt
EMBL
ODYU01000848    SOQ36228.1    NWSH01000422    PCG76507.1    AGBW02011632    OWR46375.1    + More
JTDY01005461    KOB66975.1    APCN01001776    CH477197    EAT48349.1    ATLV01026996    KE525421    KFB53736.1    CH477689    EAT37257.1    JXUM01099512    JXUM01099513    KQ564497    KXJ72185.1    AXCN02000684    AAAB01008980    EAA14176.5    ADMH02001427    ETN62583.1    DS231927    EDS27052.1    AXCM01000768    CH940649    EDW64731.2    CH963920    EDW77900.2    OUUW01000006    SPP82028.1    JXJN01016095    CH379060    KRT03853.1    CH954177    EDV59196.1    CP012523    ALC38809.1    JRES01001508    KNC22390.1    KRT03854.1    CH933807    EDW12662.2    CM000361    EDX04073.1    CM000157    EDW87772.1    CM002910    KMY88746.1    BT120121    AE014134    ADB27992.1    AGB92723.1    AF533773    AY095078    CH902620    EDV32479.1    SPP82027.1    CH479180    EDW28528.1    EDY69935.1    CH480818    EDW51975.1    CH916372    EDV99211.1    GDHF01031598    GDHF01016176    GDHF01009761    JAI20716.1    JAI36138.1    JAI42553.1    GAMC01003477    JAC03079.1    KP966547    AKJ79162.1    GBXI01009170    JAD05122.1    CVRI01000037    CRK93514.1    AHAT01023061    JARO02010201    KPP60877.1    AFYH01094405    AAQR03042343    CAAE01014700    CAG02790.1    AERX01007626    AEYP01079267    AQIA01028175    AQIA01028176    AQIA01028177    AHZZ02010485    AQIB01154041    AQIB01154042    CM001291    EHH58222.1    CM001268    EHH25079.1   
Pfam
PF00110   wnt
Interpro
IPR005817   Wnt        + More
IPR018161   Wnt_CS       
IPR026535   WNT9B       
PDB
6AHY     E-value=3.48911e-32,     Score=345

Ontologies

Topology

Subcellular location
  
SignalP
Position:   1 - 25,         Likelihood:  0.970625
 
 
Length:
340
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.26935
Exp number, first 60 AAs:
0.20502
Total prob of N-in:
0.01709
outside
1  -  340
 
 

Population Genetic Test Statistics

Pi
206.224614
Theta
196.05031
Tajima's D
0.051458
CLR
0
CSRT
0.385330733463327
Interpretation
Uncertain
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