Gene

KWMTBOMO01764  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006143

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743906_[Bombyx_mori]

Location

Bomo_Chr4(+):4073819-4077037      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.599

CDS

ATGCAATTCGAATATGATCCAGAAAAACTCATAGAAGAAGTGGAGAAACGCCCCGGAATTTGGGATTACGATCATGCTGACTATAAAATAAGAAACATACGTTACAAATTGTGGAACGACATTGTAAAAGAACTGATGGAATGCAACGTCAAATTAACAAAAATGGAAATGCGCGAACTCGAAATTCAACTACAAAAGAAATGGAAGAGCATCAAGGATTGTTTTCACAAATACTTGTCGAATCCAAACAAGGGAAGAAGGCCATACATTTACGCAAAAAAATTACAGTTCCTCTTAAAGAACCAAGAGCTGAGGGAAGTAAAAAAGCGAAACAGTGAAAACGCTTCAAGCGAATCGGAAGAAGATACAAAAAGTAAAGTATGGAGACCTAGAAAGAAAATTAAAGTTATCAAATACGAAGACCGTACGTCGGATGAGGATGTAGTCGAAATTGGTGAAAATGATCCACAAGACCAGAGAGACGATTCCAATGACGGAACCGAAGCAAATTCAATGAGGACAGATTCTAAAACAAACAAACCAACGACAGAGGAATTTGCATTCGCGAACGTGGACGTGCCGAAATACGATAACGATGATTCAGACAAAATGTTTCTAATGTCCTTACTACCACATTTAAAATCGGTACGAGAAGAACTAAAGATCAACGTTAAAATGGAACTTATGCAAGTTTTATGTAACGCCAATTATTCAGCAGCCGCTGTTAATAAATTAATCTAA

Protein

MQFEYDPEKLIEEVEKRPGIWDYDHADYKIRNIRYKLWNDIVKELMECNVKLTKMEMRELEIQLQKKWKSIKDCFHKYLSNPNKGRRPYIYAKKLQFLLKNQELREVKKRNSENASSESEEDTKSKVWRPRKKIKVIKYEDRTSDEDVVEIGENDPQDQRDDSNDGTEANSMRTDSKTNKPTTEEFAFANVDVPKYDNDDSDKMFLMSLLPHLKSVREELKINVKMELMQVLCNANYSAAAVNKLI

Uniprot

A0A2A4JID6   A0A2H1X0E4   A0A0L7KQU0   A0A212FPD0   A0A194Q0Q7   A0A194R3P9   + More
A0A212EWI2   A0A195BR61   A0A195F3Q1   A0A151XC39   F4WMC5   A0A158P282   A0A195DC77   A0A194QLR2   A0A0J7L3L1   E2AWC0   A0A151IFB9   A0A026WD33   A0A2A3ERT0   A0A088AEC2   A0A194Q210   A0A0N0PC80   A0A154P6K1   A0A0N0BFW2   A0A2S2Q978   A0A2H1WG94   A0A0A9XAN0   A0A0A9X5S0   A0A146KXI5   Q294I7   B4GL21   D0QWN7   A0A2H1WP32   K7IX93   A0A0A9WF21   A0A067RA73   A0A1B6HE62   S4P5P6   A0A3B0JSN8   A0A1B6LQR7   A0A2S2P7V0   A0A1L8FUL7   A0A0N1IJS2   A0A2J7PBC8   T1HA02   A0A0N5D5I8   A0A0P4VZP6   A0A0N0PCI2   A0A2S2NEL4   A0A067R379   A0A1E1WAP8   B4KDM4   A0A1B6JUW1   H9JU56   B4LWV6   A0A0A9YEX1   A0A1E1WBJ4   A0A146LAX9   A0A2P8XKC1   A0A2W1BQ58   A0A194PPX0   A0A0L7QNK6  

Pubmed

26227816    22118469    26354079    21719571    21347285    20798317    + More
24508170    30249741    25401762    26823975    15632085    17994087    19859648    20075255    24845553    23622113    27762356    27129103    19121390    29403074    28756777   

EMBL

NWSH01001317    PCG71731.1    ODYU01012021    SOQ58104.1    JTDY01007070    KOB65480.1    + More
AGBW02003328    OWR55560.1    KQ459584    KPI98574.1    KQ460855    KPJ11865.1    AGBW02012010    OWR45804.1    KQ976418    KYM89451.1    KQ981855    KYN34807.1    KQ982315    KYQ57858.1    GL888217    EGI64769.1    ADTU01001164    KQ980989    KYN10515.1    KQ461196    KPJ06467.1    LBMM01000937    KMQ97188.1    GL443280    EFN62280.1    KQ977799    KYM99596.1    KK107261    QOIP01000012    EZA53972.1    RLU16330.1    KZ288192    PBC34400.1    KQ459582    KPI99034.1    KQ460651    KPJ13044.1    KQ434827    KZC07471.1    KQ435794    KOX73672.1    GGMS01005085    MBY74288.1    ODYU01008462    SOQ52093.1    GBHO01029489    JAG14115.1    GBHO01029486    JAG14118.1    GDHC01019159    GDHC01006188    JAP99469.1    JAQ12441.1    CM000070    EAL28977.1    CH479185    EDW38245.1    FJ821033    ACN94736.1    ODYU01010020    SOQ54829.1    AAZX01000580    AAZX01000618    GBHO01040141    GBHO01040140    GBHO01040139    GDHC01012787    GDHC01010302    GDHC01004453    JAG03463.1    JAG03464.1    JAG03465.1    JAQ05842.1    JAQ08327.1    JAQ14176.1    KK852602    KDR20478.1    GECU01034815    JAS72891.1    GAIX01008457    JAA84103.1    OUUW01000008    SPP84023.1    GEBQ01014063    JAT25914.1    GGMR01012912    MBY25531.1    CM004476    OCT75290.1    KQ459825    KPJ19876.1    NEVH01027118    NEVH01016302    NEVH01007440    PNF13628.1    PNF25815.1    PNF35690.1    ACPB03005729    UYYF01004606    VDN05797.1    GDKW01001597    JAI54998.1    KPJ13045.1    GGMR01002773    MBY15392.1    KK852738    KDR17414.1    GDQN01006974    JAT84080.1    CH933806    EDW13858.1    GECU01004715    JAT02992.1    BABH01004109    CH940650    EDW66677.1    GBHO01013966    JAG29638.1    GDQN01006694    JAT84360.1    GDHC01014357    JAQ04272.1    PYGN01001862    PSN32456.1    KZ149935    PZC77192.1    KQ459596    KPI95362.1    KQ414855    KOC60154.1   

Proteomes

UP000218220    UP000037510    UP000007151    UP000053268    UP000053240    UP000078540    + More
UP000078541    UP000075809    UP000007755    UP000005205    UP000078492    UP000036403    UP000000311    UP000078542    UP000053097    UP000279307    UP000242457    UP000005203    UP000076502    UP000053105    UP000001819    UP000008744    UP000002358    UP000027135    UP000268350    UP000186698    UP000235965    UP000015103    UP000046394    UP000276776    UP000009192    UP000005204    UP000008792    UP000245037    UP000053825   

PRIDE

H9JU56   

Pfam

PF10545   MADF_DNA_bdg        + More
PF02944   BESS
PF13499   EF-hand_7

Interpro

IPR004210   BESS_motif        + More
IPR006578   MADF-dom       
IPR039353   TF_Adf1       
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       
IPR018247   EF_Hand_1_Ca_BS       

SUPFAM

SSF47473   SSF47473       

CDD

cd00051  EFh

ProteinModelPortal

A0A2A4JID6   A0A2H1X0E4   A0A0L7KQU0   A0A212FPD0   A0A194Q0Q7   A0A194R3P9   + More
A0A212EWI2   A0A195BR61   A0A195F3Q1   A0A151XC39   F4WMC5   A0A158P282   A0A195DC77   A0A194QLR2   A0A0J7L3L1   E2AWC0   A0A151IFB9   A0A026WD33   A0A2A3ERT0   A0A088AEC2   A0A194Q210   A0A0N0PC80   A0A154P6K1   A0A0N0BFW2   A0A2S2Q978   A0A2H1WG94   A0A0A9XAN0   A0A0A9X5S0   A0A146KXI5   Q294I7   B4GL21   D0QWN7   A0A2H1WP32   K7IX93   A0A0A9WF21   A0A067RA73   A0A1B6HE62   S4P5P6   A0A3B0JSN8   A0A1B6LQR7   A0A2S2P7V0   A0A1L8FUL7   A0A0N1IJS2   A0A2J7PBC8   T1HA02   A0A0N5D5I8   A0A0P4VZP6   A0A0N0PCI2   A0A2S2NEL4   A0A067R379   A0A1E1WAP8   B4KDM4   A0A1B6JUW1   H9JU56   B4LWV6   A0A0A9YEX1   A0A1E1WBJ4   A0A146LAX9   A0A2P8XKC1   A0A2W1BQ58   A0A194PPX0   A0A0L7QNK6  

KEGG

101743906    no KO assigned | (RefSeq) uncharacterized LOC101743906

GO

GO:0005634   GO:0003677   GO:0005509   GO:0043565   GO:0005515   GO:0006470   GO:0008138   GO:0006370   GO:0006397   GO:0004651  

PANTHER

PTHR12243  

Subcellular location

Nucleus  

Length:

246

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00075

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02565

outside

1  -  246

 

 

Pi

324.538462

Theta

132.554761

Tajima's D

3.611961

CLR

0.253637

CSRT

0.995050247487626

Interpretation

Uncertain