Gene

KWMTBOMO01758

Pre Gene Modal

BGIBMGA006008

Annotation

PREDICTED:_homeobox_protein_aristaless-like_[Bombyx_mori]

Location

Bomo_Chr4(-):3802422-3804743      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.989

CDS

ATGAGCGTTTGGTTTAAGGTCTGGTTCCAGAATCGACGGGCGAAGTGGAGGAAACAGGAAAAAGTTGGCCCCCAGGGACACCCCTACAATCCTTACTTGAGCGCTACGGGAGCCGCCCCACCCGCCTCCGTGGTCGCCTCCATGCCGAACCCCTTCACACAACTAGGGTTTGGTTTCAGGAAGCCCTTCGATACAAACGCTTTAGCTTCGTTTAGGTATGCTGGGGGTCCAGTACTTGGAGCTCAGTATCTCGGTGCACCACTTCCACGACCACCAATGTTCAGCGCCCCACTCTATACGAGTTCCCCCCCATTTCATTCCCTCCTCGCGGGTTTAGCTCCTCCCCGACAATCTCCCGATCCGCCTCCTGTTTCTCCTCCTATATCTCCGGGCAGCGAGTCTCCTCCTAACCAGCCTCCGGTTCAAGAAGTGGAGAGAAGAAGCTCGAGCATCGCAGCCCTGAGGATGGCGGCTCGGGAGCACGAATTAAGATTAGAGATATTGAGGCAGCGACATCATAGCGACCTCATAAGTTGA

Protein

MSVWFKVWFQNRRAKWRKQEKVGPQGHPYNPYLSATGAAPPASVVASMPNPFTQLGFGFRKPFDTNALASFRYAGGPVLGAQYLGAPLPRPPMFSAPLYTSSPPFHSLLAGLAPPRQSPDPPPVSPPISPGSESPPNQPPVQEVERRSSSIAALRMAAREHELRLEILRQRHHSDLIS

Similarity

Belongs to the paired homeobox family.

Uniprot

H9J916   A0A2A4JFF7   A0A2A4JH44   A0A194R7L3   A0A0L7KYT8   A0A212EWE9   + More
D2KQJ1   D2KQJ3   A0A194Q598   D2KQJ2   A0A212EWD0   H9JYC9   A0A194R248   A0A194PZ14   A0A1B0DMT3   A0A1B0GH35   A0A1L8DI66   A0A1L8DI70   A0A1B6DH69   A0A139WH33   A0A0T6BFS8   Q2MHJ3   A0A1W4WWV1   A0A1J1I186   E0W253   N6UAB0   A0A087ZTS3   A0A154PGI9   A0A1J1I5B9   A0A1S3DIU7   A0A0L7RB52   E2B5Z8   E9JBK7   A0A151XEK8   A0A026W5G4   A0A3L8E0C4   A0A0L7KXR9   A0A195EZI9   A0A195D7J6   A0A195BQE6   A0A158NE44   A0A195CLD3   A0A0J7L3R0  

Pubmed

19121390    26354079    26227816    22118469    20624848    18362917    + More
19820115    20566863    23537049    20798317    21282665    24508170    30249741    21347285   

EMBL

BABH01004652    NWSH01001608    PCG70711.1    PCG70712.1    KQ460855    KPJ11861.1    + More
JTDY01004413    KOB68194.1    AGBW02012009    OWR45806.1    GU263416    ADA70354.1    GU263418    ADA70356.1    KQ459584    KPI98570.1    GU263417    ADA70355.1    OWR45808.1    BABH01043170    KPJ11863.1    KPI98572.1    AJVK01007115    AJVK01007116    AJWK01003919    GFDF01007915    JAV06169.1    GFDF01007916    JAV06168.1    GEDC01012338    GEDC01006833    JAS24960.1    JAS30465.1    KQ971343    KYB27272.1    LJIG01000776    KRT86164.1    AB200970    BAE78538.1    CVRI01000038    CRK94111.1    DS235874    EEB19709.1    APGK01032678    KB740848    KB631170    KI210311    ENN78660.1    ERL84143.1    ERL96242.1    KQ434899    KZC10996.1    CRK94110.1    KQ414617    KOC68094.1    GL445900    EFN88859.1    GL771210    EFZ09803.1    KQ982254    KYQ58824.1    KK107436    EZA50856.1    QOIP01000002    RLU26160.1    JTDY01004725    KOB67829.1    KQ981906    KYN33294.1    KQ981153    KYN08860.1    KQ976424    KYM88358.1    ADTU01012779    ADTU01012780    ADTU01012781    ADTU01012782    ADTU01012783    ADTU01012784    ADTU01012785    ADTU01012786    ADTU01012787    ADTU01012788    KQ977600    KYN01525.1    LBMM01000918    KMQ97218.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000037510    UP000007151    UP000053268    + More
UP000092462    UP000092461    UP000007266    UP000192223    UP000183832    UP000009046    UP000019118    UP000030742    UP000005203    UP000076502    UP000079169    UP000053825    UP000008237    UP000075809    UP000053097    UP000279307    UP000078541    UP000078492    UP000078540    UP000005205    UP000078542    UP000036403   

PRIDE

H9J916    H9JYC9   

Pfam

PF03826   OAR        + More
PF00046   Homeodomain

Interpro

IPR001356   Homeobox_dom        + More
IPR003654   OAR_dom       
IPR009057   Homeobox-like_sf       
IPR017970   Homeobox_CS       
IPR000047   HTH_motif       

SUPFAM

SSF46689   SSF46689       

CDD

cd00086  homeodomain

ProteinModelPortal

H9J916   A0A2A4JFF7   A0A2A4JH44   A0A194R7L3   A0A0L7KYT8   A0A212EWE9   + More
D2KQJ1   D2KQJ3   A0A194Q598   D2KQJ2   A0A212EWD0   H9JYC9   A0A194R248   A0A194PZ14   A0A1B0DMT3   A0A1B0GH35   A0A1L8DI66   A0A1L8DI70   A0A1B6DH69   A0A139WH33   A0A0T6BFS8   Q2MHJ3   A0A1W4WWV1   A0A1J1I186   E0W253   N6UAB0   A0A087ZTS3   A0A154PGI9   A0A1J1I5B9   A0A1S3DIU7   A0A0L7RB52   E2B5Z8   E9JBK7   A0A151XEK8   A0A026W5G4   A0A3L8E0C4   A0A0L7KXR9   A0A195EZI9   A0A195D7J6   A0A195BQE6   A0A158NE44   A0A195CLD3   A0A0J7L3R0  

PDB

3A02     E-value=0.00233567,     Score=92

KEGG

101741073    K09452 homeobox protein aristaless-related | (RefSeq) homeobox protein aristaless-like

GO

GO:0003677   GO:0005634   GO:0007275   GO:0006355   GO:0043565   GO:0000977   GO:0000981   GO:0048666   GO:0005737   GO:0005852   GO:0005515   GO:0006470   GO:0008138   GO:0006370   GO:0006397   GO:0004651  

Subcellular location

Nucleus  

Length:

178

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.26419

Exp number, first 60 AAs:

0.06855

Total prob of N-in:

0.08636

outside

1  -  178

 

 

Pi

187.898245

Theta

164.31412

Tajima's D

0.560024

CLR

0

CSRT

0.528973551322434

Interpretation

Uncertain