SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01747
Pre Gene Modal
BGIBMGA006015
Annotation
PREDICTED:_uncharacterized_protein_LOC101737691_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.755
 

Sequence

CDS
ATGATGTTGAGAGAATCCCGATGGCGTTTAGGATTGATGCTCCTGTGCTTTTACACAGTCGATGGATTAATTGAGATCGTGGAGGAGCAACAATGTCAAGATTTTGGCTTCCGGCTGACGTGCCGCGAGCTAGACTCGCACATCGCCATCCTCGAGGCCTACTACACCGCCATGGAAGACTACGGCTGGCCCAACACGACCCGCGAGAGACTCGTTATCAGAACCGAAAACGACTCCGAGCTGGACCAAGTGCACGAACGTATCATTAACGCGGTGTACACACGTGAGCTGGTCGTCAATACATATCTCTGGGGACCCATCGGCATACGGTAG
Protein
MMLRESRWRLGLMLLCFYTVDGLIEIVEEQQCQDFGFRLTCRELDSHIAILEAYYTAMEDYGWPNTTRERLVIRTENDSELDQVHERIINAVYTRELVVNTYLWGPIGIR

Summary

Pfam
PF00431   CUB
Interpro
IPR000436   Sushi_SCR_CCP_dom        + More
IPR000859   CUB_dom       
IPR035914   Sperma_CUB_dom_sf       
IPR035976   Sushi/SCR/CCP_sf       
SUPFAM
SSF49854   SSF49854        + More
SSF57535   SSF57535       
Gene 3D

Ontologies

GO

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.961743
 
 
Length:
110
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.31626
Exp number, first 60 AAs:
0.29808
Total prob of N-in:
0.32431
outside
1  -  110
 
 

Population Genetic Test Statistics

Pi
28.479168
Theta
197.800425
Tajima's D
0.641627
CLR
0.31052
CSRT
0.56017199140043
Interpretation
Uncertain
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