Gene

KWMTBOMO01745

Annotation

hypothetical_protein_RR46_03708_[Papilio_xuthus]

Location

Bomo_Chr4(-):3468756-3509484      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.449

CDS

ATGTGGTGCACAGGCGTCAATCACTGTAACTTTTTGCTGTCGGAGGATTATCCTCCGTCCAGCAGCTGGTCTCCAGGAGTCGTCTACATCAAATACGCTTGTTTTGATGATACAATATCTCTGCATTACTGCAACCGCGAGTTGAGGATAGCTGAATGGGGAGCCGAGAGCGAGGGTTACATTCGAACCCCAGGGTACCCGCACTTCTACGTTGGCGATGAATGCCGCTGGCGGCTCATTGCCAACCCCGAACAAAGGATACGGGTCACATTCTTGGACGTTAGCTTAAGAAGTATAGGTCCGTTTGAAAACGAGTGTAAGGATTTCGTCTCGGTCCAAGATTCGAATGGCGATAACCTGTTGTACTCGTGCGAACAAGTCGATATGCCGATCAAACTCACTTCCACAACCAACACTGTGGAGGTGGCCGTGGAAGCAAGGTCTAAAGGCGCTTACCCGAAACGAGGAGTCCTGTTGCATTATAAAAGCATAGGCTGTGTTACTTTATCAGCGCCATCTAGTGGATATCTTGTGTATCGCAACGAAGACGTGGCACACTACATGTGCAACGTTAACTTTGTTTTCGTCGACACTCGACAGAGGGCGCGATTACTTTGGTGCTATGACGATAACAGATGGAATAATACCGTGCCTCTCTGCATTGCCGAGACGGTTGTCAAAGCCGTCGGGAACGACTCTTCACGGGAGGGCATCGGCAAAGAAACAAAACTGCCGCCCCACCAAGAACCCAACATGATAGTCGACATCGTCATCCCGTCGCTGCTGATAGCGGCCCTGTTCATCGGAAACGCGTTCATCGTACTCATCATCTATAAATACAGGAAACGGTCAGTTGTTATTGTAGTGTACGGTACTCACATTGTGTGCCCATTTCAAGTACTTCCAAACGTAGATAAGTGA

Protein

MWCTGVNHCNFLLSEDYPPSSSWSPGVVYIKYACFDDTISLHYCNRELRIAEWGAESEGYIRTPGYPHFYVGDECRWRLIANPEQRIRVTFLDVSLRSIGPFENECKDFVSVQDSNGDNLLYSCEQVDMPIKLTSTTNTVEVAVEARSKGAYPKRGVLLHYKSIGCVTLSAPSSGYLVYRNEDVAHYMCNVNFVFVDTRQRARLLWCYDDNRWNNTVPLCIAETVVKAVGNDSSREGIGKETKLPPHQEPNMIVDIVIPSLLIAALFIGNAFIVLIIYKYRKRSVVIVVYGTHIVCPFQVLPNVDK

Uniprot

A0A194PZ06   A0A194R2V3   A0A2A4JXB9   A0A0L7LA75   A0A1Y1MQP8   E0VL19   + More
U4UTM2   A0A1B0GQ86   A0A1W4X0C5   A0A026X3Y5   D6WJU5   A0A158NLT6   A0A3L8DJA5   A0A151ILC4   A0A195FV16   A0A147BG24   A0A2A3EJ58   A0A182S5P6   W5JJU0   A0A0L7R2W2   A0A182W6Y0   A0A182RCQ0   A0A1Q3FVB0   A0A1Q3FVT9   A0A1Y9GKV4   K7IQT3   A0A2R5LAI0   A0A1J1IEE0   T1IKQ1   A0A232FBC3   B7P5Z9   E9J388   A0A224YKB9   A0A224YQR1   A0A131YWS1   A0A0P5AMX8   A0A0P6IX99   A0A0P5FEA4   A0A0P5C4U2   A0A0P5BN45   E2C845   A0A0C9RL71   A0A0P6E827   A0A151HZR8   A0A1B0CNI3   A0A151WZP1   A0A151J8L2   A0A0P5N5J1   A0A0N8BXQ4   A0A154PM52   E2AQT1   A0A088A1F8   A0A0P6GDV3   E9FZR5   A0A0P5EQS8   A0A0N8C3M2   A0A182F0R2   A0A0N8DR70   A0A0M9A5L7   A0A0P4YP61   A0A0P4YDL3   A0A2L2YDK1   A0A1D1VM48   A0A1Y3BG07   A0A1V9XBT4   A0A0K2UAV1   A0A0K2UBP3   A0A0K2UAV4   T1KS84   A0A0P5C4X7   A0A0P5XG60   A0A0P5KKP3  

Pubmed

26354079    26227816    28004739    20566863    23537049    24508170    + More
18362917    19820115    21347285    30249741    29652888    20920257    23761445    20075255    28648823    21282665    28797301    26830274    20798317    21292972    26561354    27649274    28327890   

EMBL

KQ459584    KPI98556.1    KQ460855    KPJ11849.1    NWSH01000448    PCG76338.1    + More
JTDY01002089    KOB72136.1    GEZM01030354    GEZM01030349    JAV85607.1    DS235263    EEB14075.1    KB632364    ERL93541.1    AJVK01006584    AJVK01006585    KK107019    EZA62706.1    KQ971343    EFA03096.2    ADTU01019826    ADTU01019827    ADTU01019828    ADTU01019829    ADTU01019830    ADTU01019831    QOIP01000007    RLU20019.1    KQ977121    KYN05528.1    KQ981241    KYN44271.1    GEGO01005693    JAR89711.1    KZ288250    PBC31061.1    ADMH02001286    ETN63170.1    KQ414664    KOC65168.1    GFDL01003511    JAV31534.1    GFDL01003512    JAV31533.1    APCN01002463    APCN01002464    GGLE01002408    MBY06534.1    CVRI01000047    CRK97366.1    JH430595    NNAY01000475    OXU28126.1    ABJB010152318    ABJB010720239    ABJB011013757    DS643202    EEC02021.1    GL768059    EFZ12705.1    GFPF01006952    MAA18098.1    GFPF01006953    MAA18099.1    GEDV01005931    JAP82626.1    GDIP01201485    JAJ21917.1    GDIQ01026407    JAN68330.1    GDIP01148851    JAJ74551.1    GDIP01175542    JAJ47860.1    GDIP01187295    LRGB01001581    JAJ36107.1    KZS11422.1    GL453538    EFN75898.1    GBYB01008990    GBYB01011737    JAG78757.1    JAG81504.1    GDIQ01078247    JAN16490.1    KQ976699    KYM77432.1    AJWK01020377    AJWK01020378    AJWK01020379    AJWK01020380    KQ982635    KYQ53339.1    KQ979548    KYN21085.1    GDIQ01150816    JAL00910.1    GDIQ01134627    JAL17099.1    KQ434978    KZC12961.1    GL441834    EFN64193.1    GDIQ01054411    JAN40326.1    GL732528    EFX87101.1    GDIP01143135    JAJ80267.1    GDIQ01118083    JAL33643.1    GDIP01008887    JAM94828.1    KQ435748    KOX76433.1    GDIP01224583    JAI98818.1    GDIP01232580    JAI90821.1    IAAA01018067    IAAA01018068    IAAA01018069    LAA05430.1    BDGG01000008    GAV02690.1    MUJZ01021360    OTF79792.1    MNPL01015596    OQR71005.1    HACA01017982    CDW35343.1    HACA01017981    CDW35342.1    HACA01017983    CDW35344.1    CAEY01000423    GDIP01175541    JAJ47861.1    GDIP01072761    JAM30954.1    GDIQ01182775    JAK68950.1   

Proteomes

UP000053268    UP000053240    UP000218220    UP000037510    UP000009046    UP000030742    + More
UP000092462    UP000192223    UP000053097    UP000007266    UP000005205    UP000279307    UP000078542    UP000078541    UP000242457    UP000075901    UP000000673    UP000053825    UP000075920    UP000075900    UP000075840    UP000002358    UP000183832    UP000215335    UP000001555    UP000076858    UP000008237    UP000078540    UP000092461    UP000075809    UP000078492    UP000076502    UP000000311    UP000005203    UP000000305    UP000069272    UP000053105    UP000186922    UP000192247    UP000015104   

Pfam

PF00431   CUB        + More
PF02140   Gal_Lectin

Interpro

IPR035976   Sushi/SCR/CCP_sf        + More
IPR035914   Sperma_CUB_dom_sf       
IPR000859   CUB_dom       
IPR000436   Sushi_SCR_CCP_dom       
IPR000922   Lectin_gal-bd_dom       

SUPFAM

SSF49854   SSF49854        + More
SSF57535   SSF57535       

Gene 3D

2.60.120.290    

CDD

cd00033  CCP
cd00041  CUB

ProteinModelPortal

A0A194PZ06   A0A194R2V3   A0A2A4JXB9   A0A0L7LA75   A0A1Y1MQP8   E0VL19   + More
U4UTM2   A0A1B0GQ86   A0A1W4X0C5   A0A026X3Y5   D6WJU5   A0A158NLT6   A0A3L8DJA5   A0A151ILC4   A0A195FV16   A0A147BG24   A0A2A3EJ58   A0A182S5P6   W5JJU0   A0A0L7R2W2   A0A182W6Y0   A0A182RCQ0   A0A1Q3FVB0   A0A1Q3FVT9   A0A1Y9GKV4   K7IQT3   A0A2R5LAI0   A0A1J1IEE0   T1IKQ1   A0A232FBC3   B7P5Z9   E9J388   A0A224YKB9   A0A224YQR1   A0A131YWS1   A0A0P5AMX8   A0A0P6IX99   A0A0P5FEA4   A0A0P5C4U2   A0A0P5BN45   E2C845   A0A0C9RL71   A0A0P6E827   A0A151HZR8   A0A1B0CNI3   A0A151WZP1   A0A151J8L2   A0A0P5N5J1   A0A0N8BXQ4   A0A154PM52   E2AQT1   A0A088A1F8   A0A0P6GDV3   E9FZR5   A0A0P5EQS8   A0A0N8C3M2   A0A182F0R2   A0A0N8DR70   A0A0M9A5L7   A0A0P4YP61   A0A0P4YDL3   A0A2L2YDK1   A0A1D1VM48   A0A1Y3BG07   A0A1V9XBT4   A0A0K2UAV1   A0A0K2UBP3   A0A0K2UAV4   T1KS84   A0A0P5C4X7   A0A0P5XG60   A0A0P5KKP3  

PDB

6GJE     E-value=0.00102657,     Score=99

KEGG

105842906    no KO assigned | (RefSeq) uncharacterized LOC105842906

GO

GO:0016021   GO:0008233   GO:0030246  

Length:

306

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

49.89512

Exp number, first 60 AAs:

0.00949

Total prob of N-in:

0.52011

outside

1  -  255

TMhelix

256  -  278

inside

279  -  284

TMhelix

285  -  302

outside

303  -  306

 

 

Pi

270.822909

Theta

167.302099

Tajima's D

2.150404

CLR

0.414281

CSRT

0.907404629768512

Interpretation

Uncertain