Gene

KWMTBOMO01744

Annotation

Zinc_finger_DNA_binding_protein_[Operophtera_brumata]

Location

Bomo_Chr4(+):3357155-3358359      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.185

CDS

ATGTCTCCTACGCATAAATACGGTTGCTGTTCCAGTCGAGCTGCTGCCACTGAGGTACTGAAATGTTGTGAATGCAAGATTCCACACCACTACGGATGTATTGATGGACCTGGGAAAAAACAATTCAAAGACCTTTCAGCTGACGTTAAATCATCGTGGATCTGTCCGTTGTGCGTGGTCAAGAGACCTAAATCTGACGTTTACGAACATCATGTGACTCTGCGCAAGAAGGACGCTGTTATTACTCATACGAGCTTAAATGATTTCCGCTCAATGATCCGTGAAGAGGTGTCCACCTTGTTGGATGAATTTAGAGCAAACATTCTCCGCCAGTTCGACCTACAAAGCACTGAAGTATTGAATCGTCTGAGTCGTGTTGATGATGCTCTGAGTAACTTACAGGTAAAATATGAAGAGGTAAAAAAGGATCTCAGTGACAAAACGAATATAATCACCATCCTGGAATCTGAAAACCAAGATTTAAAATCCACAATTATGGACTTGAGCTCCCGGTTGTCTAGGATCGACCAGTACTCACGATCAAGCAACATAGAAATACAGTGTATACCCGAATTTAAGTCTGAAAACCTGAACTCAACATTAAAGCAACTTGCTAATACAATAAATTATAATTTGAATGAAGCTGACATCCATATCTGCAAGAGGACATCCAAGTTAAGCAAGGAGAACAAACGCCCCCGCTCCGTCTTCGTCAAGTTTAGCTGCCCTAGAGTACGCGACGAGTTCCTGGCTGCCACCATCACGTTCAACAAGAGGGTTACTTCCAAAGCTGACAAGCTCAACTCCAGTCACCTGGGAATAGCGGGCGAGCGACGTCCTATCTACGTCTGCGAGCACCTGACACCTGCTATGAAAAATGTTCATGCGGCTGCTAGAGCAAAAGCTAAGGACCTAAATTATAAGTTCGTGTGGGTCAAAGGCGGTAATGTCTATATGCGCAAAACAGAATCTTCAGAATACAAGTTAATTAAATCAGTTGAATCTTTATCACTATTAGAGTGA

Protein

MSPTHKYGCCSSRAAATEVLKCCECKIPHHYGCIDGPGKKQFKDLSADVKSSWICPLCVVKRPKSDVYEHHVTLRKKDAVITHTSLNDFRSMIREEVSTLLDEFRANILRQFDLQSTEVLNRLSRVDDALSNLQVKYEEVKKDLSDKTNIITILESENQDLKSTIMDLSSRLSRIDQYSRSSNIEIQCIPEFKSENLNSTLKQLANTINYNLNEADIHICKRTSKLSKENKRPRSVFVKFSCPRVRDEFLAATITFNKRVTSKADKLNSSHLGIAGERRPIYVCEHLTPAMKNVHAAARAKAKDLNYKFVWVKGGNVYMRKTESSEYKLIKSVESLSLLE

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

A0A0L7K4K4   A0A0L7KQ92   A0A0L7K4I6   A0A2H1WBH0   A0A2H1V294   A0A2H1VJZ0   + More
A0A0L7K3N5   A0A2A4JC78   A0A0L7L0X6   A0A2A4K1S6   A0A2W1BYU6   A0A194QEB0   A0A2A4IW47   A0A0L7LEU2   A0A0L7L1J8   A0A2A4IU35   A0A2H1W956   A0A2A4IUU8   A0A0L7LEV4   A0A0L7KTU7   A0A2A4J0C3   A0A2A4IXU4   A0A0L7L3E9   A0A2H1VD37   A0A212EWC1   A0A2A4JBL7   A0A2A4IUX2   A0A0L7K3E6   A0A2H1VAR2   A0A2H1VRS8   A0A2A4IZ89   A0A0L7KUP7   A0A2A4IYB9   A0A2H1W117   A0A2A4JD60   A0A2H1W5G4   A0A2H1WYV3   A0A0L7LTI6   A0A0L7K2U8   A0A0L7LRU8   A0A2A4K238   A0A1Y1JXQ1   A0A0A9WQ01   A0A2W1BZ95   A0A2H1WRH7   A0A0K8ST40   A0A0A9YA31   A0A2H1WIH0   A0A2A4JUE7   A0A2A4IYM6   A0A1B6K2E9   A0A0L7LLD8   A0A1S3DR11   A0A2A4JR78   A0A3Q0IZV8   J9JLZ4   A0A1Y1MTQ3   A0A2H1X1K9   A0A2H1WVR8   A0A293LR31   A0A0L7LF48   A0A2W1BHR3   A0A1B6L4T1   A0A0N0PFG8  

Pubmed

26227816    28756777    26354079    22118469    28004739    25401762    + More

EMBL

JTDY01010989    KOB57787.1    JTDY01007401    KOB65231.1    KOB57786.1    ODYU01007238    + More
SOQ49844.1    ODYU01000349    SOQ34960.1    ODYU01002971    SOQ41143.1    JTDY01012405    KOB52279.1    NWSH01002032    PCG69366.1    JTDY01003733    KOB69075.1    NWSH01000267    PCG77878.1    KZ149914    PZC78000.1    KQ459054    KPJ03878.1    NWSH01005702    PCG64035.1    JTDY01001361    KOB74078.1    JTDY01003535    KOB69383.1    NWSH01007563    PCG62908.1    ODYU01007128    SOQ49629.1    NWSH01007173    PCG63054.1    JTDY01001411    KOB73935.1    JTDY01005854    KOB66545.1    NWSH01004587    PCG64890.1    NWSH01005418    PCG64228.1    JTDY01003264    KOB69846.1    ODYU01001881    SOQ38706.1    AGBW02012032    OWR45776.1    NWSH01002191    PCG68944.1    NWSH01006948    PCG63178.1    JTDY01014577    KOB52017.1    ODYU01001557    SOQ37940.1    ODYU01004037    SOQ43507.1    NWSH01004298    PCG65247.1    JTDY01005451    KOB66988.1    NWSH01005479    PCG64170.1    ODYU01005672    SOQ46768.1    NWSH01001819    PCG70025.1    ODYU01006462    SOQ48321.1    ODYU01012049    SOQ58146.1    JTDY01000136    KOB78669.1    JTDY01013334    JTDY01001687    KOB52155.1    KOB73157.1    JTDY01000280    KOB77936.1    NWSH01000216    PCG78307.1    GEZM01097808    JAV54094.1    GBHO01033077    JAG10527.1    KZ149893    PZC78914.1    ODYU01010507    SOQ55661.1    GBRD01009465    JAG56359.1    GBHO01013672    JAG29932.1    ODYU01008890    SOQ52873.1    NWSH01000638    PCG75103.1    NWSH01004492    PCG65047.1    GECU01002092    JAT05615.1    JTDY01000678    KOB76257.1    NWSH01000830    PCG73963.1    ABLF02002574    ABLF02065803    ABLF02065804    GEZM01021253    JAV89053.1    ODYU01012701    SOQ59142.1    ODYU01011375    SOQ57082.1    GFWV01006244    MAA30974.1    JTDY01001455    KOB73826.1    KZ150197    PZC72320.1    GEBQ01021483    JAT18494.1    LADJ01030744    KPJ21224.1   

Proteomes

UP000037510    UP000218220    UP000053268    UP000007151    UP000079169    UP000007819    + More
UP000053240   

Pfam

PF14529   Exo_endo_phos_2        + More
PF03258   Baculo_FP
PF00153   Mito_carr
PF00628   PHD
PF00005   ABC_tran

Interpro

IPR019786   Zinc_finger_PHD-type_CS        + More
IPR011011   Znf_FYVE_PHD       
IPR004244   Transposase_22       
IPR013083   Znf_RING/FYVE/PHD       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR019787   Znf_PHD-finger       
IPR001841   Znf_RING       
IPR004941   Baculo_FP       
IPR001965   Znf_PHD       
IPR002067   Mit_carrier       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR023395   Mt_carrier_dom_sf       
IPR003593   AAA+_ATPase       
IPR026082   ABCA       
IPR003439   ABC_transporter-like       
IPR027417   P-loop_NTPase       

SUPFAM

SSF57903   SSF57903        + More
SSF56219   SSF56219       
SSF103506   SSF103506       
SSF52540   SSF52540       

Gene 3D

3.30.40.10     3.60.10.10     1.50.40.10    

ProteinModelPortal

A0A0L7K4K4   A0A0L7KQ92   A0A0L7K4I6   A0A2H1WBH0   A0A2H1V294   A0A2H1VJZ0   + More
A0A0L7K3N5   A0A2A4JC78   A0A0L7L0X6   A0A2A4K1S6   A0A2W1BYU6   A0A194QEB0   A0A2A4IW47   A0A0L7LEU2   A0A0L7L1J8   A0A2A4IU35   A0A2H1W956   A0A2A4IUU8   A0A0L7LEV4   A0A0L7KTU7   A0A2A4J0C3   A0A2A4IXU4   A0A0L7L3E9   A0A2H1VD37   A0A212EWC1   A0A2A4JBL7   A0A2A4IUX2   A0A0L7K3E6   A0A2H1VAR2   A0A2H1VRS8   A0A2A4IZ89   A0A0L7KUP7   A0A2A4IYB9   A0A2H1W117   A0A2A4JD60   A0A2H1W5G4   A0A2H1WYV3   A0A0L7LTI6   A0A0L7K2U8   A0A0L7LRU8   A0A2A4K238   A0A1Y1JXQ1   A0A0A9WQ01   A0A2W1BZ95   A0A2H1WRH7   A0A0K8ST40   A0A0A9YA31   A0A2H1WIH0   A0A2A4JUE7   A0A2A4IYM6   A0A1B6K2E9   A0A0L7LLD8   A0A1S3DR11   A0A2A4JR78   A0A3Q0IZV8   J9JLZ4   A0A1Y1MTQ3   A0A2H1X1K9   A0A2H1WVR8   A0A293LR31   A0A0L7LF48   A0A2W1BHR3   A0A1B6L4T1   A0A0N0PFG8  

KEGG

NA   

GO

GO:0046872   GO:0016021   GO:0022857   GO:0042626   GO:0005524   GO:0008168  

PANTHER

PTHR11505   PTHR19229  

Length:

340

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03100

outside

1  -  340

 

 

Pi

176.743413

Theta

173.015278

Tajima's D

0.067784

CLR

1.246818

CSRT

0.389830508474576

Interpretation

Uncertain