Gene

KWMTBOMO01743  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006134

Annotation

PREDICTED:_HEAT_repeat-containing_protein_1_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr4(+):3272835-3282406      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.536

CDS

ATGGCAACCACGTCATTAGCGCAACAGCTACAAAAGCTGAAGGCACCGCAATCTTCCATATACAAAGAGTCAACGATACAAGTTTCGCTGCTATTTAACCCTTCAGAGGCAGCTTCGAAGGACCGTGACACCTTCTACGAGATCGGCTTGAGTGGTCTTCAAGAGCTCATAGCACTTTGCCCCGATTTCTCCACATACCAAGACACTTTATTCAGTCGCTCATCCAAAGAGTTTGAAAGAGCAGTACAGTCTAAAGAGGTCAATCAAAACTTGGATCAGAACATTGAGAAGTTCTTACTTCAATTGTCTCCGTACTATTTACTACAGTCTGCGCATAAAACATTAGAATGGCTAATAAACAGATACCACATACATCAGTACAACCAAGATGCCATGATGGCACTAATACTACCATACCATGGCACAATGATATTCGTGAGATGTGTTCAATTAATGGACCTGAAATATGCTTCAAACAGATGGATTTGGCTTGTTCCAATTAAAAAAAATGGTATTCCTTTAGGAAACCAAGTTTTATACAATCAGTGTGCTTCTAATATGGGAACTCTACAATTCATAGCTAAAATGGTGCTAAAATATGTACAAGAGTACAAAGAAAGAGCTACGCAGTTAAATACGATATATGCCTTTTTCTGTCAAGTCGCTGTGGGGACTATTAGTACAGTAAAAAATGTTAGTGAAGGAATGATTACCGCACTACTTCCAACACTTATGAAAGGCATTGAGTCACCCATAGCTGACTTCCGGGCATCTTGTTACATCATTATAGGCTATCTGTTTACAAAAACGAAACTCAAAGAAAAAACTCTCAATCAAATATTGGATAGGATGCTAACAACTGAATTTGATTTGTCATATGATGTAGTTCTTCTTATAGTTATGATGTATGAACACCAAAAGCACATAACTAAAATGTCGGATGTGATATTTAATATTTCTGTGGACATGATGCATACCTTCTGTGGTCATATAAAAGTACTTGTAGCTAAAAAGACTAACATTCGACCATTTGTGTTAGCATTTTTAAAGAAAGTTCTACCTCTAGCACAGAGAGGTGTAGAGGAATTTAAAACTTACAGCCCTTTGCCAGATATATTGATAGAGGAAGTTGATTTAAAAAACCAAGATCCTGAAAAAATTATAATGTGCATCCTAGATGCATATCAATTACCTACTGCTGATGAACAAGCCGATGGTGAGAGTGACATTGAAATTATAGATGAAGAGGACTTTTCATCCAAAATCATCAAGTGGTATGCTATACTCCTTAAAAACATAGAGCGCCAGTACCCTGACGCATTTGACAAGGTTATAACTTCAGTAATGAACTCTGAAAGTGATATTACTCCCAAACGACAGCGTCAACTTTCAAAACTACTTGGATTTAAACCGGCTATAGCTCACAAAGTGGGCGGTACGTATCTGTTTGAAAACCTAAACCACACTAATCCAAATCTACGTATGGAAGCCGTGAGATATATTGAAAAAGAATTCAGAGCTCTGAAACTACAAAATCCAGATTTCGTGAAAGAATCCATTCTTGAAAGATTCAACGATGATCATATTGCTGTAGTTAATGCAGCCTTAGAAATATCGAATGAATCTTTAGCTCAAGTTCTTAATGAGGTCGATGTGACTAATGCGTTCATAAGAATAATATCAAAGCGATCGAAAAAGTGGAAGGCTACTATAAAAACAGCTATAGTTAAATTCTGTTCATTGAATTTGCTACCCGTGAATCAAGACACTGTATTAGCAATCCTACCACTATTATTCCCACGAGATGAAAAGGAACTCGAGATCTGTATTCAAATCATGAAATCACAATGGGGCCAAAAGTTTGAACTGACAAATAAAGCTTCAAAAAAACTACAAAATCTATCTGACTATAGTAAAGTGAACCAGAAAATATTTCAAGTTTTGTTCATTGATAACGCCATTGATTTCGATGATCTATTAAATGAAAATCAGCTAGATAAGAATGATACTCTGAACATATGTTTCTATCTTCTCCTTAAAACATGTACATTCAAGAAAGCAGCAGTCGAGGAAGTCACCGCTTTACTAAATTTACTGCTCGAATCTGTTGAGAACAGATCAATTGTTCAGAGTACTGGTGAAGTGCCCTTCTCTGCCGAGATCATGCCAGAATTTATAATGAAAGCGAAAGAAAACAAAATGCTCTTTGAAGTTATAAAGTACATATTCAGTAAAGTCATTGAAGATGTCAACATTAAGGGGGTTACTAAACCTTGGTGTAATATGTTAAGGACAATAGATATGATTTTAATAAGAAGATTGTATGAAATATGTATGACAGGGTGTGCTATACCCGGCTACGGAGAAAATTATGTAGAGCTTTTACAAAAATTGCTAGATAAATTCTTCAGCAACCCTAAAGAGAAGTTTGATTTTGTAGCAAATTTCGCCTGCGGACATATTCTATATGCCACTGACCCTAAAGATGTGATCGCACCTGAATTACAATTAAGAAGTATTAAATTATTAATTAACTTCATTGCTGTACAAAATAATGCGAAGTGGCTATTTGATTCGGATGTCGTCATTATGGTTATCTTGTTAAATTTGAACAACCCGATTGCTGCTATACGCGAATGCATAGTAGACTTCATAGAAAAATTACTTCGAGAGAAACCTGACAACAAATTATTGTATGTGAAGTTATTAGAAGAGCTACTCGTACACAGAAGTGAGTTATTGCTAGATCCAAATCAGATACAGCAGGTTCTGAAGACAATTTTTACACAGAAAGATCAACAACAAAAACTATTCAGAAGAAACTGTCTATTACGACTCACGGGCTTGCTGAGTGAAAAGACACCGAGCCATATAAAATCTGCCTTCCTAAAAATTTTGAGTCATCTTGACAACGCTTCTACATTTCCTTTACTTACGCCATGTTTAAGTCCTTTCACGAAATCGTTGAAGGATAAAGAGAACAATAGATTGACATTCGATATTTACGAATCAAACTTGTTCAGAAGTGTATTTTCTTTCATCAACGAGTCAACCGTTACGACTTTTACAAAAGACCAAGTCTGGAATATCATTGAATTGGGCTTGAAAGAATACAGAGAATGTGTACTTGAAGAAGATCAGTCGTTTACAAGTCCCGCTGTTCTCATAATGAGACAATTAACAGAAGATGTATTCGGAAAAGCTCCCGATGAAAAACGTAAACAATTAGTTTACCTCATTAGCTTAGCTGGTGCGGTAAGCAACAACTCAAAAATTTCAAGCGTGGCCTCAAAAGTAATGAAGAAAATTCAACTTGCTTTCGAAGATTTTAAACCAATTTTAGAGGGCATGGTGAATGCTGAGGATCCCGCTGATAATGCGCAGAAAAAGAAGAAGCACACGGTTTCAATGCTATCATATCAATTGGCTGAAACCAACGAATGGAGATTGGGCGTGACCCTACTCGAATATGTCCAATCAAAAAAGAAAATGAAACTTGACAATACTTTCGTAACAATCCTCTTCCATGTATTGAAAAGGTGTTTGAGGTTCGAAGAGCAATCGCACGTCGAATACACAAAACAATTAATCCTGTCCTCATTGTGGTATTTCTGTAAAAAATACGTAAACGACAAAGACGCTCAACAACTGAAATCTTTAAAGAATATCTTCGATGTAGACTTGGTTGTCCAATGCATCAGGGGGACCCAGAACCCTCAAACTCACCATCATGCATTGATCCTATTGTCACACGCAGCGTACATGTTGCCAGAGCAAGTTCTCAATCATACAATGGAAATTTTCACTTTTATGGGTTCATCAGTTCTCAGGCACGACGATGCGTACAGCTTCCAGATAATTACAAAGATTATAGAAACTTTGATACCTATTTTAGTGAAACTAGACAAAAACATTGAAGATCACACGGAGAAGGAATTGCAGCAGCTTCAGAATCGAGTCGTCCCAGTGCTTCGTATATTCGCTGACGTTGTCTTGCATGTTCCCGAACACAGAAGGTTACCATTGTTCAAAAAACTGCTAGAAACACTGGGACCAAGTCAGTTCCTTTGGGTGTTCCTAGCTTTATTAATAGAAACTCATATTGCCCATTTCAATGAACCAAAGAAGAAGGATAAAAGGCAATCAAGAACATTGGCCGACCGAGAATCGCCACTTAACAGACTCGATTTTGGCCAAAATGTCGTCCTTGAATTCCCACCAGAGGTCTGCCTGGAAAATTTCATAAAATTAATCTTGTACATCAGATCTTTGCCCATACAAAAAGACGACGAGTCAATGGAGACTGATATCGATCCAAGTGAGATATTTAGCGTGAACGGTCACACGGCAATCCAACTCCGTCACTACAAATACGTTATAATAACATTCATGAATGCTTGCTTAGCGTCATCCCGATTTATCCACCACTGTGGTCAAGCTATGATTCCGAAAGAAATGGAAACTCACTACAAGAACCTCATCGTGAACATACTAACCTTCATACAGTCAATTTCCAAAGTGTCCGACGAGAAGACAGCTAAGTATTGGCGGGTGATGTTGCACCACAGCTACGACTTATTAGACCACACGAACAATCTGCTATCGGCTCAGATGTTCTTGGGCGTCGTTAAAGGATTATTGAAGTACCCGTTGCAAACGGTCCGAAGGAAATCTATGGAATTATTGAACTCAAAAATACAGAACACTCCAGAAATCTTTGCCGAAGTCGATAAAGAAATTTTGCATTCACTAATACCGGAGCTCTTGGATATTGTGAAGACTGTAGAAAATAAAGATACCAACTTAAGTGACGTCGCCGCGCAAGAATTGGAACTGAACCAACAGACAGCCCTTCTTTCCTTGAAGCTATTGACCCGGATGTTGGCAGCCGAGGATCCAGAACCATTCAAAGCAGTTCTCGAAGTGGTCACAGAGTACACGTGTAACCAAAGCATTTCAGGAAACGTCATGGCCTCTATTGTTTTGTGTTTGGCCGAATTATGCAGCAACCTGAAAGCGCACGCCCTAGTCAGCCTTCGTAGATTCATGCCTGCCCTGATCAAAGTACTGAAGAGGCAGAGAAAAGCTGAAACACCGGAGCTGATCTTACTCAGTACCGTGACGGCCATAGCGAAAATCGTCGAAAGCCTACCTCTGTTCCTAAGTCCGTATCTACAGAAAGTTCTATACGAGTACTCTATATTATTGGCCAAATGGCAGGTCGCCGATCTGGAGTGCAGTAAAATATCCGCTATAGTCACAAAACTATCGAATATACGAAAGAAAATAGCCGACTCAATACCTCCGAGGGTTTTGATTCCCGTTGTGAGCGAAACGCATCAGCTGCTGTTGGAAAAGGAAAAATTCGACGCGATAGGACCGGTCATGTCGGTCTTGGCTGATAGTTTCGCCAACGTGACCCCCGCCGACTTTACCGCGTTACAGCAGGACTTGACCTCCCTCTTCCTGACAGCACTGCAGTTGCGCAGTGACGCGGTCGACAAGAATGTGGACAGTGATGTGGTAGACAGAGCTGAGGATGAAGTGGTGAACGCGCTGGTGTCTCTTGTGCTGAAGCTTTCAGAGTCCAGTTTCAGACCATTGTACTTTAAGATATACGATTGGGCTATTAGGACGAACGTCGACGGACACAAAAATAGAGCCATCACATTCTACAGATTGAGCAGCGCCATAGCGGAGAAGCTGAAAGGTCTTTTCGTCTTGTTCGCGGCTCACTTCATGAAGAACGCTGCTGATTTGCTCGACGGCTGTAATAACACAAAAACCGAACAACTTTACTTCGACGACGAGGAAAAATGTGAAATCCTCATCAAATACATAATAAAGACACTTCATGTAGTGTTTTTGTATGACAGCCAGCAATTCGTCAACAAAAATCGATTTGAAACGCTGATGCAGCCAATTGTGGATCAATTAGAAAATACTGTAGGCGGAATATCGAACCTTAAAGTTAGAGCTATAGAAAACATTATTCCGTGCGTATCACAGTTCGCAGTGGCGACAGCAGACGATTCGCTTTGGAAGCTTCTAAACTACCAGATATTATTGAAAACTAGGAATAACGATGCGGAAATAAGATTAACAGCTTTAGACTGTTTAGTAGCTATGGCAACACAGCTAGGAAGCAGCTGGCTGCCCCTATTAGCCGAGAGTGTACCATTCTTAGCTGAGCTCTTAGAAGACGGTGACCAGAGAATTGAAACCTGCACTAAAGAGGCCATTAGGAAACTCGAACTTATACTAGGAGAACCCCTGGAAAAATACTTTTGA

Protein

MATTSLAQQLQKLKAPQSSIYKESTIQVSLLFNPSEAASKDRDTFYEIGLSGLQELIALCPDFSTYQDTLFSRSSKEFERAVQSKEVNQNLDQNIEKFLLQLSPYYLLQSAHKTLEWLINRYHIHQYNQDAMMALILPYHGTMIFVRCVQLMDLKYASNRWIWLVPIKKNGIPLGNQVLYNQCASNMGTLQFIAKMVLKYVQEYKERATQLNTIYAFFCQVAVGTISTVKNVSEGMITALLPTLMKGIESPIADFRASCYIIIGYLFTKTKLKEKTLNQILDRMLTTEFDLSYDVVLLIVMMYEHQKHITKMSDVIFNISVDMMHTFCGHIKVLVAKKTNIRPFVLAFLKKVLPLAQRGVEEFKTYSPLPDILIEEVDLKNQDPEKIIMCILDAYQLPTADEQADGESDIEIIDEEDFSSKIIKWYAILLKNIERQYPDAFDKVITSVMNSESDITPKRQRQLSKLLGFKPAIAHKVGGTYLFENLNHTNPNLRMEAVRYIEKEFRALKLQNPDFVKESILERFNDDHIAVVNAALEISNESLAQVLNEVDVTNAFIRIISKRSKKWKATIKTAIVKFCSLNLLPVNQDTVLAILPLLFPRDEKELEICIQIMKSQWGQKFELTNKASKKLQNLSDYSKVNQKIFQVLFIDNAIDFDDLLNENQLDKNDTLNICFYLLLKTCTFKKAAVEEVTALLNLLLESVENRSIVQSTGEVPFSAEIMPEFIMKAKENKMLFEVIKYIFSKVIEDVNIKGVTKPWCNMLRTIDMILIRRLYEICMTGCAIPGYGENYVELLQKLLDKFFSNPKEKFDFVANFACGHILYATDPKDVIAPELQLRSIKLLINFIAVQNNAKWLFDSDVVIMVILLNLNNPIAAIRECIVDFIEKLLREKPDNKLLYVKLLEELLVHRSELLLDPNQIQQVLKTIFTQKDQQQKLFRRNCLLRLTGLLSEKTPSHIKSAFLKILSHLDNASTFPLLTPCLSPFTKSLKDKENNRLTFDIYESNLFRSVFSFINESTVTTFTKDQVWNIIELGLKEYRECVLEEDQSFTSPAVLIMRQLTEDVFGKAPDEKRKQLVYLISLAGAVSNNSKISSVASKVMKKIQLAFEDFKPILEGMVNAEDPADNAQKKKKHTVSMLSYQLAETNEWRLGVTLLEYVQSKKKMKLDNTFVTILFHVLKRCLRFEEQSHVEYTKQLILSSLWYFCKKYVNDKDAQQLKSLKNIFDVDLVVQCIRGTQNPQTHHHALILLSHAAYMLPEQVLNHTMEIFTFMGSSVLRHDDAYSFQIITKIIETLIPILVKLDKNIEDHTEKELQQLQNRVVPVLRIFADVVLHVPEHRRLPLFKKLLETLGPSQFLWVFLALLIETHIAHFNEPKKKDKRQSRTLADRESPLNRLDFGQNVVLEFPPEVCLENFIKLILYIRSLPIQKDDESMETDIDPSEIFSVNGHTAIQLRHYKYVIITFMNACLASSRFIHHCGQAMIPKEMETHYKNLIVNILTFIQSISKVSDEKTAKYWRVMLHHSYDLLDHTNNLLSAQMFLGVVKGLLKYPLQTVRRKSMELLNSKIQNTPEIFAEVDKEILHSLIPELLDIVKTVENKDTNLSDVAAQELELNQQTALLSLKLLTRMLAAEDPEPFKAVLEVVTEYTCNQSISGNVMASIVLCLAELCSNLKAHALVSLRRFMPALIKVLKRQRKAETPELILLSTVTAIAKIVESLPLFLSPYLQKVLYEYSILLAKWQVADLECSKISAIVTKLSNIRKKIADSIPPRVLIPVVSETHQLLLEKEKFDAIGPVMSVLADSFANVTPADFTALQQDLTSLFLTALQLRSDAVDKNVDSDVVDRAEDEVVNALVSLVLKLSESSFRPLYFKIYDWAIRTNVDGHKNRAITFYRLSSAIAEKLKGLFVLFAAHFMKNAADLLDGCNNTKTEQLYFDDEEKCEILIKYIIKTLHVVFLYDSQQFVNKNRFETLMQPIVDQLENTVGGISNLKVRAIENIIPCVSQFAVATADDSLWKLLNYQILLKTRNNDAEIRLTALDCLVAMATQLGSSWLPLLAESVPFLAELLEDGDQRIETCTKEAIRKLELILGEPLEKYF

Uniprot

H9J9E2   A0A2A4JW17   A0A2H1VDL7   A0A0L7L8Y2   A0A194Q0N3   A0A212F6R4   + More
A0A194R2U8   A0A1W4WPB8   A0A1Y1MKS6   D6WHT0   A0A1Q3EYJ1   B0W629   A0A1B0DKY4   A0A1S4EY57   Q17LU6   A0A0T6B4W2   A0A182R7Z1   A0A2M4AB37   A0A182JD64   W5JNW0   A0A182PPT4   A0A182F262   A0A182Q5N1   A0A182NBF9   A0A1I8N2S0   A0A182YFT4   A0A232FBX1   A0A0M9A3E4   K7IQT2   E2AQS9   A0A026X347   A0A0L7R2R4   F4WU42   A0A1I8QA80   A0A151JP45   A0A3L8DHV3   A0A158NLT5   A0A2M4CM97   W8BYC4   A0A1B0G699   A0A310SDR6   A0A1A9Z456   A0A0J7KW05   A0A1Q3EZ07   G1PZM2   E2B8C7   A0A1J1IVS7   A0A088A1L4   A0A2A3EH68   G1Q7L1   A0A1S3Q3Y1   A0A1B0BT99   A0A1A9XLD2   A0A1A9UYT1   M7B4P8   K7FTJ6  

Pubmed

19121390    26227816    26354079    22118469    28004739    18362917    + More
19820115    17510324    20920257    23761445    25315136    25244985    28648823    20075255    20798317    24508170    21719571    30249741    21347285    24495485    21993624    23624526    17381049   

EMBL

BABH01004596    NWSH01000468    PCG76201.1    ODYU01001984    SOQ38933.1    JTDY01002252    + More
KOB71794.1    KQ459584    KPI98554.1    AGBW02009976    OWR49436.1    KQ460855    KPJ11844.1    GEZM01030348    JAV85618.1    KQ971321    EFA00063.1    GFDL01014673    JAV20372.1    DS231846    EDS36177.1    AJVK01006538    AJVK01006539    CH477212    EAT47667.1    LJIG01009815    KRT82326.1    GGFK01004648    MBW37969.1    ADMH02000801    ETN64993.1    AXCN02000622    NNAY01000475    OXU28122.1    KQ435748    KOX76435.1    GL441834    EFN64191.1    KK107019    EZA62705.1    KQ414664    KOC65167.1    GL888349    EGI62269.1    KQ978837    KYN27998.1    QOIP01000007    RLU20020.1    ADTU01019825    GGFL01002207    MBW66385.1    GAMC01008254    JAB98301.1    CCAG010006778    KQ760945    OAD58590.1    LBMM01002684    KMQ94481.1    GFDL01014515    JAV20530.1    AAPE02047084    GL446308    EFN88053.1    CVRI01000058    CRL02641.1    KZ288250    PBC31060.1    AAPE02058960    AAPE02058961    JXJN01020061    KB573111    EMP27123.1    AGCU01079032    AGCU01079033    AGCU01079034   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053268    UP000007151    UP000053240    + More
UP000192223    UP000007266    UP000002320    UP000092462    UP000008820    UP000075900    UP000075880    UP000000673    UP000075885    UP000069272    UP000075886    UP000075884    UP000095301    UP000076408    UP000215335    UP000053105    UP000002358    UP000000311    UP000053097    UP000053825    UP000007755    UP000095300    UP000078492    UP000279307    UP000005205    UP000092444    UP000092445    UP000036403    UP000001074    UP000008237    UP000183832    UP000005203    UP000242457    UP000087266    UP000092460    UP000092443    UP000078200    UP000031443    UP000007267   

PRIDE

H9J9E2   

Pfam

PF08146   BP28CT        + More
PF12397   U3snoRNP10

Interpro

IPR040191   UTP10        + More
IPR016024   ARM-type_fold       
IPR012954   BP28_C_dom       
IPR011989   ARM-like       
IPR022125   U3snoRNP10_N       
IPR021133   HEAT_type_2       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.10.10    

ProteinModelPortal

H9J9E2   A0A2A4JW17   A0A2H1VDL7   A0A0L7L8Y2   A0A194Q0N3   A0A212F6R4   + More
A0A194R2U8   A0A1W4WPB8   A0A1Y1MKS6   D6WHT0   A0A1Q3EYJ1   B0W629   A0A1B0DKY4   A0A1S4EY57   Q17LU6   A0A0T6B4W2   A0A182R7Z1   A0A2M4AB37   A0A182JD64   W5JNW0   A0A182PPT4   A0A182F262   A0A182Q5N1   A0A182NBF9   A0A1I8N2S0   A0A182YFT4   A0A232FBX1   A0A0M9A3E4   K7IQT2   E2AQS9   A0A026X347   A0A0L7R2R4   F4WU42   A0A1I8QA80   A0A151JP45   A0A3L8DHV3   A0A158NLT5   A0A2M4CM97   W8BYC4   A0A1B0G699   A0A310SDR6   A0A1A9Z456   A0A0J7KW05   A0A1Q3EZ07   G1PZM2   E2B8C7   A0A1J1IVS7   A0A088A1L4   A0A2A3EH68   G1Q7L1   A0A1S3Q3Y1   A0A1B0BT99   A0A1A9XLD2   A0A1A9UYT1   M7B4P8   K7FTJ6  

PDB

5OQL     E-value=8.63783e-32,     Score=349

KEGG

101739183    K14550 U3 small nucleolar RNA-associated protein 10 | (RefSeq) HEAT repeat-containing protein 1

PATHWAY

03008    Ribosome biogenesis in eukaryotes - Bombyx mori (domestic silkworm)

GO

GO:0030686   GO:0034455   GO:0045943   GO:0032040   GO:0000462   GO:2000234   GO:0005739   GO:0001650   GO:0005488   GO:0003676   GO:0006508   GO:0009982   GO:0006396   GO:0030529   GO:0016020   GO:0005515   GO:0003779   GO:0016021  

PANTHER

PTHR13457  

Length:

2096

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.5508

Exp number, first 60 AAs:

0.00103

Total prob of N-in:

0.01798

outside

1  -  2096

 

 

Pi

213.053782

Theta

198.237527

Tajima's D

-0.39277

CLR

0.679069

CSRT

0.269636518174091

Interpretation

Uncertain