Gene

KWMTBOMO01741

Pre Gene Modal

BGIBMGA006017

Annotation

PREDICTED:_uncharacterized_protein_LOC105842836_[Bombyx_mori]

Location

Bomo_Chr4(-):3257500-3258154      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.916 Nuclear   Reliability : 1.289

CDS

ATGGATAATAACAATAATTTTGTTGGTAACAATACTAAAGTGACAATGGAGACGAACTCGAGTCTTCTGAAAGTAGTCGGAAACAACTGCGTCATTTATGTTCGTACTAATTACGGCGACATCGAGGTGGTCGGCAACAATTGTCGGGTGGAGGTGACGAATAACTACGGGATCATCCACGTTGTGGGCGCAAACAGCCTTGTGAACATCAACAAACGTTGGAGAGGCGACAGCGTTCAGCTCCTCGGGGCGAATTGTAGGCTGATCGTTGCGGGGAAGCTGATGTCAGCCCCGTCCTACGAAGCCCAACTGTCGCCATCCAGCACGGACCTGGACGACGTTATTGAACCGATTTTCCCATTCGTGATGCGGTGA

Protein

MDNNNNFVGNNTKVTMETNSSLLKVVGNNCVIYVRTNYGDIEVVGNNCRVEVTNNYGIIHVVGANSLVNINKRWRGDSVQLLGANCRLIVAGKLMSAPSYEAQLSPSSTDLDDVIEPIFPFVMR

Uniprot

H9J925   H9J926   A0A2A4JX36   A0A194PYZ2   A0A194R3M9   A0A2H1VXY0   + More
A0A212F7Q2   A0A0L7KVF9   A0A1I8NLA1   U4UR30   A0A158NCP5   N6T5E9   A0A195BWT2   A0A195EMA8   A0A0J7KZ24   E2A222   A0A2Z0LME9   E9ILM3   A0A151XEW4   A0A1I8MDT0   A0A026VSR5   A0A3L8D2Z1   A0A0L0BMF8   A0A1V1NXG0  

Pubmed

19121390    26354079    22118469    26227816    23537049    21347285    + More
20798317    25632977    21282665    25315136    24508170    30249741    26108605   

EMBL

BABH01004596    BABH01004592    NWSH01000468    PCG76204.1    KQ459584    KPI98552.1    + More
KQ460855    KPJ11845.1    ODYU01005128    SOQ45689.1    AGBW02009843    OWR49762.1    JTDY01005205    KOB67252.1    KB632327    ERL92515.1    ADTU01012006    APGK01051861    KB741207    ENN72898.1    KQ976396    KYM93042.1    KQ978691    KYN29261.1    LBMM01001915    KMQ95553.1    GL435917    EFN72506.1    KM034777    AJG05482.1    GL764129    EFZ18354.1    KQ982215    KYQ58936.1    KK108610    EZA46670.1    QOIP01000014    RLU14862.1    JRES01001654    KNC21118.1    ATBP01001465    ETR67279.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000095300    UP000030742    UP000005205    UP000019118    UP000078540    UP000078492    UP000036403    UP000000311    UP000075809    UP000095301    UP000053097    UP000279307    UP000037069    UP000189670   

PRIDE

H9J925    H9J926   

Pfam

PF00665   rve

Interpro

IPR012337   RNaseH-like_sf        + More
IPR001584   Integrase_cat-core       

SUPFAM

SSF53098   SSF53098       

ProteinModelPortal

H9J925   H9J926   A0A2A4JX36   A0A194PYZ2   A0A194R3M9   A0A2H1VXY0   + More
A0A212F7Q2   A0A0L7KVF9   A0A1I8NLA1   U4UR30   A0A158NCP5   N6T5E9   A0A195BWT2   A0A195EMA8   A0A0J7KZ24   E2A222   A0A2Z0LME9   E9ILM3   A0A151XEW4   A0A1I8MDT0   A0A026VSR5   A0A3L8D2Z1   A0A0L0BMF8   A0A1V1NXG0  

KEGG

101738894    K20701 poor Imd response upon knock-in | (RefSeq) uncharacterized LOC101738894

PATHWAY

04624    Toll and Imd signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0015074  

Length:

124

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10596

Exp number, first 60 AAs:

0.05746

Total prob of N-in:

0.35401

outside

1  -  124

 

 

Pi

218.684087

Theta

169.804377

Tajima's D

0.915888

CLR

0

CSRT

0.63806809659517

Interpretation

Uncertain