Silkworm Genome Informatics Database

Gene

KWMTBOMO01733

Annotation

PREDICTED:_uncharacterized_protein_LOC101738890_[Bombyx_mori]

Location

Bomo_Chr4(+):2890033-2893925 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.305 PlasmaMembrane Reliability : 1.236

CDS

ATGAAATCCCTAGGAATGATAGATGCAACATTTGATTCGTTAAAACACCAGTTCCACCTTGTCTCTGACTTGGATTTTCCATATGACGGCATAATAGGTAATGACTACTTCACCACACTTAACTGCAAAATAGATTACACTGAAAACACATTAGTTGTCAACAACACTAAACTTAATCTAAAATTCACTGATCCAATTTATACTATTCCTCCTAGGACCGAAACCGTTATCGAATGCTCTGTACTAAATCCAGAAGTTAAAGAGGGTCTTATTTTAGACCAAAATCAGATCAGTTCTCTTCTCATCGCTAACTGCATAGTAAAAGTTAAATCAAACTCAAGAATAAATATATCAGTTGTGAATACTTCCGAATATCCATTACGTGTAAATTCAAACTTAAAACTCAAATTGATACCATTTGACGAAAAAGCTAATAGCAAAATTTTCTATACTTCCGTCAGTGACAAAGAAAGTCAAAACAATGCTTTACAGAGAGCCGAAGCAGTTCTAGACCTATTACGTGTCTCACACTTGAATGTCGAAGAAAAAGATGCTCTCTATGATCTATGTGCGACTTATTCTGACATCTTCCATTTACCCAATGACAAATTGACTTGTACCGACGCGATACTTCATGAAATAACCACTTCTTCCTCTGTCCCTATTAATACGAAATCGTATAGATTCCCTGAAGTGCACAAACAAGAAGTCCAATCCCAAATTACTAAAATGTTGGATGAAGGGATCATTAAACCTTCCACATCTCCATGGTCCTCTCCAATCTGGATAGTCCCCAAGAAAATCGACGCATCTGGTCAACGCAAATGGCGAGTGGTGATCGACTACCGTAAGCTCAACGACATCACTATAGGTGACGTTTATCCAATCCCTAATATTTCCGAAATATTGGACCAACTAGGTAAATCTAAATATTTTAGCACATTAGATCTTGCTTCCGGTTTCCATCAAATTAGGATGTCTCCACAAGATGCTCCTAAAACCGCTTTCTCAATTCCTCAAGGTCACTTCGAATTCACACGCATGCCTTTCGGACTGAAAAACGCCCCAGCTACTTTTCAGAGACTCATGAACTCTGCCCTCTCAGGCCTACAAGGCATACAATGCTTCGTATATTTGGACGATATAGTCGTCCATTCATTTGACCTAGAAAAACATATCCTCAACCTTTCCAATATTTTCGACAGGCTCCGTACTTTTAATTTAAAACTTCAACCCGACAAATGTGAATTTCTCCGTAAGGAAGTATCTTACCTTGGTCACATAATAACCGATGAAGGTGTAAAACCTAATCCGGAAAAAATCAAAGCCGTGCAACAATTTCCTACTCCCAAATCTCCCAAAGATATAAAATCCTTCCTTGGACTCGTATCATACTACAGAAAATTTATCCCAGATATATCCAAAATAGCTAAACCCCTTACTAATCTCCTAAAAAAGAATGTCCCGTTCCTTTGGCAAAATGAACAGCAACTCGCCTTTGAAACCTTGAAAAACGCACTCATAACAGCTCCACTACTAGCCTATCCTGACTTTAACAAACCATTTGTACTTACTTGTGACGCATCCGATTATGCAATCTCCGCCATTTTATCCCAGGGTGAAATAGGGAAGGATCGCCCCATTGCCTATGCATCACGAACCCTAAACAAATCCGAATTAAATTATTCCGTTTCTGAAAAAGAATGTTTGGCCATTATATTCGGCACCAAAACGTTCAGACCATATCTATATGGACATCGTTTCAAAATTGTTACAGACCATCAACCGCTTAAATGGTTATTCAGTCACAAAGATCCGTCTTCCAAATTAATCCGATGGAGACTCAAACTAGAGGAGTTTGATTATGAAATTGAATATAAAAGGGGCAAAATCAATCGAAACGCGGATGCTTTGTCCCGTTTTCCTGTAAACCCAATAATCGAAAACCAACCTCAATCTTCCACTTCTGGCACCGCCAATCCTAATCTCCAAGAATCTGAGATTCCTTCCGACCTTCTAGAAGACCTTACCGAACTTGGTGCCTTAGATATCAGTCCAAGCCAGGGCGTCGATTTCAGCCCTCTCTATCCACCTTCCGAATCAAGTGATCCAAACCCTCCACCTTTGCCAGATCCTGTCAACGACACACACGAACCGACACCTGAAATAAATTCCAACATCACAGACGACTACTCGACCTTTCTAAAATCCTTCACAGACGAGAACCAAACTTTTAATACTCAAGTTAAAGAACACAACGAAAGTCTCCTTAAAAGCACTTCAAAAACTATTTTAATCCCTGTCTCCATTGATTTCGATGACTCAAACCCTTATCTTGAAGACATACTTTCCTCATTAGAAGACCGTACAATCCTTGACAATGAACGTGAACTTCATAGTTTTATGAAAATAGAGCTTAAAGGAAAAGTTTTTTATCTTCTATTTACGAAGGTTTACTATTTCGACAATTGCACTTACCCAGACATATTCAAGACCCTTAAGTCCGCACGAGACGACATCATACTCCAAGGTGACATAAATGATATTGCCATTTCCGACTTCAAGAGCTCATTTGAACAACACTCTTTTGTGAAAATTTATGGGATGCTAGTTTACCTATTCAACAACACAAACACTACAGTAAACATACACCATGATACTATCATCCATCCTGTCCCTACCGAAATTTCTAGAATACTAAAAGAAAACCACGATATTCCGATCGCCGGTCATCTCGGTTCCAATCGAATGTTAAGCAGAATTAAAGAACGTTATCATTGGAGAAATATGCGCTCAGACATCGAAGACTACGTCAAGAATTGCAAACTGTGTCAATCAAACAAAGCTCTGCGCAAGATCAACAAATCTCCTATGCAAATCACCACCAGCTCTACTCGCCCCTTTGAGAGGATTAGCCTCGATCTCGTTGGTCCCTTGCCTGAGGCTGGCCTTTCAAAGCTTAAGTTTATTCTAACTCTTCAAGACGATTTAACCAAATTTTCTATTGCATACCCAATCTCTAATGCTACCGCAGAGGAGTCCTGCGAATGCTTAGTCCACTTCATTTCCTTATTTGGTATCCCGAAATCAATACTCACTGATCAGGGAACCAACTTCACTGCCGAACTCTTTAAAGTAACGTGTCAATTTTTAAAAATTAAGCAACTCTGGTCCTCTCCCTACCATCCCCAAACGCAGGGCGCCCTGGAAAGAAGTCACTCAACACTAAAAGAATACCTTAAGTCTTATGTGAATGATAATCAGACAAACTGGCATAAATTTGTATACACAGCTATGCTCACCTACAACAGTACAATCCACACCACTACTCAATTTACACCTTACGAACTCGTCTTTGGTCATAAACCATATATACCCGATTCCGTCTTCGATTTACGATCAGATGTCACGTACCCTGAATATCTTAAGATGCTTAGTCACCGCCTCAAAATATCAAGAGAAAAAGCTCTACAAAATATTAATGTCTCTAAAGAAAAGTCCAAGACATATTATGACAGACACTCTCGCCCCGTCCAATACAAGGTTGGAGATTACGTGTATTTAAAGAATCATCTCCGACTTAGAAAGGCCCTATCACCGATGTGGAAAGGTCCTTACAAAGTTGTAAAAATTCACGGCAATAACACCCTTTCCCTCCTGGTAAATCGTCGGCACGTGAAACATCATTTCGACGAAGTAAAACCAGCACCCGTAGTATAA

Protein

MKSLGMIDATFDSLKHQFHLVSDLDFPYDGIIGNDYFTTLNCKIDYTENTLVVNNTKLNLKFTDPIYTIPPRTETVIECSVLNPEVKEGLILDQNQISSLLIANCIVKVKSNSRINISVVNTSEYPLRVNSNLKLKLIPFDEKANSKIFYTSVSDKESQNNALQRAEAVLDLLRVSHLNVEEKDALYDLCATYSDIFHLPNDKLTCTDAILHEITTSSSVPINTKSYRFPEVHKQEVQSQITKMLDEGIIKPSTSPWSSPIWIVPKKIDASGQRKWRVVIDYRKLNDITIGDVYPIPNISEILDQLGKSKYFSTLDLASGFHQIRMSPQDAPKTAFSIPQGHFEFTRMPFGLKNAPATFQRLMNSALSGLQGIQCFVYLDDIVVHSFDLEKHILNLSNIFDRLRTFNLKLQPDKCEFLRKEVSYLGHIITDEGVKPNPEKIKAVQQFPTPKSPKDIKSFLGLVSYYRKFIPDISKIAKPLTNLLKKNVPFLWQNEQQLAFETLKNALITAPLLAYPDFNKPFVLTCDASDYAISAILSQGEIGKDRPIAYASRTLNKSELNYSVSEKECLAIIFGTKTFRPYLYGHRFKIVTDHQPLKWLFSHKDPSSKLIRWRLKLEEFDYEIEYKRGKINRNADALSRFPVNPIIENQPQSSTSGTANPNLQESEIPSDLLEDLTELGALDISPSQGVDFSPLYPPSESSDPNPPPLPDPVNDTHEPTPEINSNITDDYSTFLKSFTDENQTFNTQVKEHNESLLKSTSKTILIPVSIDFDDSNPYLEDILSSLEDRTILDNERELHSFMKIELKGKVFYLLFTKVYYFDNCTYPDIFKTLKSARDDIILQGDINDIAISDFKSSFEQHSFVKIYGMLVYLFNNTNTTVNIHHDTIIHPVPTEISRILKENHDIPIAGHLGSNRMLSRIKERYHWRNMRSDIEDYVKNCKLCQSNKALRKINKSPMQITTSSTRPFERISLDLVGPLPEAGLSKLKFILTLQDDLTKFSIAYPISNATAEESCECLVHFISLFGIPKSILTDQGTNFTAELFKVTCQFLKIKQLWSSPYHPQTQGALERSHSTLKEYLKSYVNDNQTNWHKFVYTAMLTYNSTIHTTTQFTPYELVFGHKPYIPDSVFDLRSDVTYPEYLKMLSHRLKISREKALQNINVSKEKSKTYYDRHSRPVQYKVGDYVYLKNHLRLRKALSPMWKGPYKVVKIHGNNTLSLLVNRRHVKHHFDEVKPAPVV

Uniprot

A0A2S2NNZ3 X1XU34 J9KPM2 X1WLD3

EMBL

GGMR01006290 MBY18909.1 ABLF02008932 ABLF02008933 ABLF02041632 ABLF02011604 + More

Proteomes

UP000007819

Pfam

PF00665   rve        + More
PF00078   RVT_1
PF17919   RT_RNaseH_2
PF17921   Integrase_H2C2
PF17917   RT_RNaseH
PF12259   Baculo_F

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR000477   RT_dom
IPR041588   Integrase_H2C2
IPR036397   RNaseH_sf
IPR001584   Integrase_cat-core
IPR041577   RT_RNaseH_2
IPR012337   RNaseH-like_sf
IPR002589   Macro_dom
IPR041373   RT_RNaseH
IPR001878   Znf_CCHC
IPR036875   Znf_CCHC_sf
IPR022048   Envelope_fusion-like

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630
SSF57756   SSF57756

Gene 3D

2.40.70.10 3.30.420.10

ProteinModelPortal

A0A2S2NNZ3 X1XU34 J9KPM2 X1WLD3

PDB

4OL8 E-value=9.43281e-68, Score=657

KEGG

102464576 no KO assigned | (RefSeq) Mir3328, bmo-mir-3328; microRNA 3328

GO

GO:0003676 GO:0015074 GO:0008270 GO:0006508 GO:0009982 GO:0006396 GO:0030529 GO:0016020 GO:0005515 GO:0003779 GO:0016021

Length:

1239

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00119

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00002

outside

1 - 1239

Pi

28.32679

Theta

37.855867

Tajima's D

0.249931

CLR

246.579399

CSRT

0.443577821108945

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree