Gene

KWMTBOMO01721

Pre Gene Modal

BGIBMGA006129

Annotation

PREDICTED:_protein_asteroid_[Bombyx_mori]

Location

Bomo_Chr4(+):2370895-2373263      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.552 PlasmaMembrane   Reliability : 1.248

CDS

ATGGGAGTACGAGGACTAACTACTTATATAAACAAGAATGAGGACATTTTTTTGAAAGACTTTGTATTATACGATTCCTGTGTTGTTATTGACGGTCACAGTCTCTGTGCTCAATTATATCAGCGTCTGAACAGTTTTTCTGCTTTCGGCGGCGATTATGACAAATTTTTTCAGTACGTAAGAACATTCTTTAAACATTTTCGGAAATGCAATTTAACCTCATACGTATTGTTTGACGGAAGTTACGAGACTAGAAAACTTAAAACTGCATATCATAGACTGAGATCCAAGATATATGGAGCGTCATGCCTAGATCCAGTTACTCAAGGATGCATGCAGATCTTCCCCTTGCTCATACGTAATGTTTTCAAAGAGGCATTGATTGATATTGGTGTTGCGTACACAGTATGCGAATTTGAGGCAGACGATGAAATCGCGGCTATGGCAAGGCATTTAAACTGTCCTGTACTGAGTTACGATTCAGATTTTTATATATACAACGTTTTATATATTCCATTCAACACTGTAGATTTTAAACCGAGATGTGTTATAATAGATGGTGTTAAGAAACATGTCTTAAATTGTAAAATATACAGATTTGAACAGTTAACTAATAGCTTTGAAGGAATCAAACAGGAAATTTTACCACTGCTTGCCACATTACTTGGCAATGATTTTGTGCAGAAGAGAGTTTTTGGAAAATTCTTTTCTGAATTTAAATTACCTAAGGCAAAAAAAAATCAAAATGATCAACAGAGATGTATCGAGGGCCTATTCAAATGGTTGCAGAATGAGTCTATTGATACGGCTATCTCTAAAATTATTGGAAGATTAAAGAAAAATCGCAAGGAGAAAGTATTTTATATTATTAAAAAAAGCATTGAAGGCTACAACAGAAAGAACTGTCGCTCATTGAAATACTTTAATATTCCAGAAAATACAGAAGAAATTGTTTCTGTATTACCAGAAAATGTTAATAAATTATTGGGAAAAGATTGTAATGACAATGATGACAGTGTTATACCAAATAATCAAATAGATGAAAATGAGACAATAGAAAGTCCACAATATGATTCTGATACAAATGAACAGTCGTCAGAAGAAGAGAATAGCTCTGATCAAGAAGACGATACCAATGAACTGGGTATCCCTGATTGGTTTGCAGAAGGAATAAGAAACAACACAATCCCTCACAGTAGTATAAATCTTTACACACATCATTTACATTTTGGTTCACCACAAGCTGAGGATTATAATGATGAAGATGCTTTCCTCTGTGCATTACCTATTCTGAGGTACTCTTTTGATATTCTTACAGATTACGAGCAAGAATATGTTACATATGTGAGCAGAGACAAAAGCCTCAACTATCACAGATTAATCATAGACAGAGAATATTCAATACCAAGACCTTTAGAAGTACCATATTCAAATCTTACAGATGAACAATTAAAGCTATATTTTAAAAATTTCTTCAAAATTAAAATGCCAATGTTAGATTTTAATTTAATTGATTTATTACCTAAGAGTTTCCAGTTGTATATGCTCAGCATCCTCTGGTGGGTTAACACCTGTGAAGTACCTATAGGCTTGGTTCATAGTTTATTTGTTTGCTACATTATGCTGGAGATGATTGATGAAAGCGTTGGTACAATTCGAGGTCAAAAGTATTATAATGAGAAATATCAAAAAACAATTGAAGAATACAAAAACAGAATGATTGTACTACCAAGTTTGACAGAAGGTGAATTATTTTTGAACAAAAACAAAATTCAACATGAAGACTGCTTTATAGCAGCGAAAATGCTTTTACAGTATTTCGAGATTGATGCTAAGATTAAAAAGAGACCCAAAAGCAATTATCATGTGAATAAAATACATAAATATGCCAAATTTCAGTGTTGTTTGCAACAAATTAATGATTTAAATACACTGTGTAAAAAGCCATATCAAAATACAAAGTATGGAAAGTCTTATAACGGTACCTTTGTTTATAATTTTGCACTAAAAATGGATACCCAGAATGATCCAAAAGTGTTCGTAAATCAGTATCTCAAAGATAGTACTACAATATTAATGTTTTACAATAGTCTTTGTACAGTTTATGATGAGCTGGTATTAGCGTTAGGCCTAAGACATTTTAAATGGGAGAGGTCAAAGAGCAGAAGAAAAAGAAAAGAGATGTTGGAGGATGAATTAAACTTTATTGTAAAAGGTTTTGAATCTGAAGTTGTTATATAA

Protein

MGVRGLTTYINKNEDIFLKDFVLYDSCVVIDGHSLCAQLYQRLNSFSAFGGDYDKFFQYVRTFFKHFRKCNLTSYVLFDGSYETRKLKTAYHRLRSKIYGASCLDPVTQGCMQIFPLLIRNVFKEALIDIGVAYTVCEFEADDEIAAMARHLNCPVLSYDSDFYIYNVLYIPFNTVDFKPRCVIIDGVKKHVLNCKIYRFEQLTNSFEGIKQEILPLLATLLGNDFVQKRVFGKFFSEFKLPKAKKNQNDQQRCIEGLFKWLQNESIDTAISKIIGRLKKNRKEKVFYIIKKSIEGYNRKNCRSLKYFNIPENTEEIVSVLPENVNKLLGKDCNDNDDSVIPNNQIDENETIESPQYDSDTNEQSSEEENSSDQEDDTNELGIPDWFAEGIRNNTIPHSSINLYTHHLHFGSPQAEDYNDEDAFLCALPILRYSFDILTDYEQEYVTYVSRDKSLNYHRLIIDREYSIPRPLEVPYSNLTDEQLKLYFKNFFKIKMPMLDFNLIDLLPKSFQLYMLSILWWVNTCEVPIGLVHSLFVCYIMLEMIDESVGTIRGQKYYNEKYQKTIEEYKNRMIVLPSLTEGELFLNKNKIQHEDCFIAAKMLLQYFEIDAKIKKRPKSNYHVNKIHKYAKFQCCLQQINDLNTLCKKPYQNTKYGKSYNGTFVYNFALKMDTQNDPKVFVNQYLKDSTTILMFYNSLCTVYDELVLALGLRHFKWERSKSRRKRKEMLEDELNFIVKGFESEVVI

Uniprot

H9J9D7   A0A2A4K9R4   A0A1E1WK91   A0A0L7L341   A0A194Q0M2   A0A212F1N0   + More
A0A2J7QBV1   A0A2J7QBU7   D6WJ78   A0A1B6DNA6   A0A0L7R8M1   A0A067QXW0   E2BK26   E9J1N3   A0A151J8T7   A0A151WV60   B4MZQ1   A0A2A3E3T6   A0A158P3W3   K7IYR4   A0A232EHJ2   A0A195CNY2   A0A1W4W987   A0A1B0G8W8   A0A2M4BE05   F4WKV5   A0A154PNA7   A0A151JVJ1   A0A023EZ07   A0A195BKR7   A0A3L8DPW3   Q172X9   T1HPC6   A0A224XJ26   A0A182GF33   B4P301   Q29LI4   B3MN84   B4ID45   A0A0J9QTN0   A0A3B0K4M5   A0A182RRI9   Q7Q1V9   A0A0A1X7Y4   A0A026W1C0   A0A182JNG6   A0A1B6G3H4   A0A0A9XEL9   A0A0K8T5C4   A0A210PE65   T1JN56   E9H293   A0A146M4V6   A0A1B6DTK4   A0A146M1Q8  

Pubmed

19121390    26227816    26354079    22118469    18362917    19820115    + More
24845553    20798317    21282665    17994087    21347285    20075255    28648823    21719571    25474469    30249741    17510324    26483478    17550304    15632085    22936249    12364791    25830018    24508170    25401762    28812685    21292972    26823975   

EMBL

BABH01004521    NWSH01000036    PCG80402.1    GDQN01003631    JAT87423.1    JTDY01003326    + More
KOB69736.1    KQ459584    KPI98544.1    AGBW02010853    OWR47624.1    NEVH01016296    PNF26061.1    PNF26060.1    KQ971343    EFA04435.1    GEDC01010168    JAS27130.1    KQ414632    KOC67189.1    KK853129    KDR10993.1    GL448740    EFN83934.1    GL767674    EFZ13214.1    KQ979480    KYN21258.1    KQ982708    KYQ51809.1    CH963920    EDW77836.1    KZ288405    PBC26154.1    ADTU01008606    NNAY01004486    OXU17826.1    KQ977513    KYN02187.1    CCAG010006989    GGFJ01001907    MBW51048.1    GL888206    EGI65197.1    KQ434998    KZC13329.1    KQ981701    KYN37474.1    GBBI01004277    JAC14435.1    KQ976453    KYM85320.1    QOIP01000005    RLU22401.1    CH477429    EAT41100.1    ACPB03014846    GFTR01007966    JAW08460.1    JXUM01010374    KQ560305    KXJ83147.1    CM000157    EDW87208.1    CH379060    EAL34061.1    CH902620    EDV31041.1    CH480829    EDW45471.1    CM002910    KMY87411.1    OUUW01000004    SPP79901.1    AAAB01008980    EAA14355.3    GBXI01007477    JAD06815.1    KK107570    EZA48859.1    GECZ01012780    JAS56989.1    GBHO01026346    JAG17258.1    GBRD01005087    JAG60734.1    NEDP02076750    OWF34778.1    JH431429    GL732585    EFX74129.1    GDHC01003811    JAQ14818.1    GEDC01008300    JAS28998.1    GDHC01004888    JAQ13741.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053268    UP000007151    UP000235965    + More
UP000007266    UP000053825    UP000027135    UP000008237    UP000078492    UP000075809    UP000007798    UP000242457    UP000005205    UP000002358    UP000215335    UP000078542    UP000192221    UP000092444    UP000007755    UP000076502    UP000078541    UP000078540    UP000279307    UP000008820    UP000015103    UP000069940    UP000249989    UP000002282    UP000001819    UP000007801    UP000001292    UP000268350    UP000075900    UP000007062    UP000053097    UP000075881    UP000242188    UP000000305   

PRIDE

H9J9D7   

Pfam

PF12813   XPG_I_2        + More
PF00752   XPG_N
PF08423   Rad51
PF00403   HMA
PF00080   Sod_Cu

Interpro

IPR026832   Asteroid        + More
IPR039436   Asteroid_dom       
IPR029060   PIN-like_dom_sf       
IPR006085   XPG_DNA_repair_N       
IPR013632   DNA_recomb/repair_Rad51_C       
IPR027417   P-loop_NTPase       
IPR018152   SOD_Cu/Zn_BS       
IPR006121   HMA_dom       
IPR036423   SOD-like_Cu/Zn_dom_sf       
IPR001424   SOD_Cu_Zn_dom       
IPR036163   HMA_dom_sf       
IPR006084   XPG/Rad2       

SUPFAM

SSF88723   SSF88723        + More
SSF52540   SSF52540       
SSF55008   SSF55008       
SSF49329   SSF49329       

Gene 3D

2.60.40.200    

CDD

cd00305  Cu-Zn_Superoxide_Dismutase
cd00371  HMA

ProteinModelPortal

H9J9D7   A0A2A4K9R4   A0A1E1WK91   A0A0L7L341   A0A194Q0M2   A0A212F1N0   + More
A0A2J7QBV1   A0A2J7QBU7   D6WJ78   A0A1B6DNA6   A0A0L7R8M1   A0A067QXW0   E2BK26   E9J1N3   A0A151J8T7   A0A151WV60   B4MZQ1   A0A2A3E3T6   A0A158P3W3   K7IYR4   A0A232EHJ2   A0A195CNY2   A0A1W4W987   A0A1B0G8W8   A0A2M4BE05   F4WKV5   A0A154PNA7   A0A151JVJ1   A0A023EZ07   A0A195BKR7   A0A3L8DPW3   Q172X9   T1HPC6   A0A224XJ26   A0A182GF33   B4P301   Q29LI4   B3MN84   B4ID45   A0A0J9QTN0   A0A3B0K4M5   A0A182RRI9   Q7Q1V9   A0A0A1X7Y4   A0A026W1C0   A0A182JNG6   A0A1B6G3H4   A0A0A9XEL9   A0A0K8T5C4   A0A210PE65   T1JN56   E9H293   A0A146M4V6   A0A1B6DTK4   A0A146M1Q8  

KEGG

101738489    no KO assigned | (RefSeq) protein asteroid

GO

GO:0004518   GO:0006281   GO:0008586   GO:0007526   GO:0001752   GO:0030001   GO:0004784   GO:0046872   GO:0016021  

PANTHER

PTHR15665  

Length:

746

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.38416

Exp number, first 60 AAs:

0.03924

Total prob of N-in:

0.00478

outside

1  -  746

 

 

Pi

37.417838

Theta

61.324625

Tajima's D

-1.181424

CLR

303.788177

CSRT

0.106694665266737

Interpretation

Uncertain