Silkworm Genome Informatics Database

Gene

KWMTBOMO01719 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006023

Annotation

PREDICTED:_uncharacterized_protein_LOC106143196_[Amyelois_transitella]

Location

Bomo_Chr4(-):2363567-2365044 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.345

CDS

ATGAAGCCTGAAATAGACGCAAAAGTCGAAGAGAACGACAATCCACTTCCAGTAGGAGATGTGATAGGAGACACAGCGTACAGTGAAAGATTTGTGTTGAAAATTCTCATAAAGTTAGCCAATTTAGACACACTCAAAAATGAAATAAAAGAGAAATCTTTCGAAGAAGATCTTTGTATGCTCTGGGATATGACTGCAGAACGAGATGTTGTACTATTCCTCCAAAAACACGATAGCCTTAACCTCATCAACTTTGCATTGCCTATGATGGACTCACCGCGACTGATAGAAATTATGATCGGTATCGTGGGCAACATGTGCTGTCAAAAGGAGGTTGTGTCCAGTATCTTGAAGATGGATGGATTTTTGATTCAACTTCTTGAACATTCAAAGTGTGATGATAGTTTGACTTTGGTACAATTATTACGGCTTATAAACTCATGTCTTTTCTTGTCTAATGACAGTGATATCCCAATTTTAATGACAGTATTTGAATCAGTAGGATATTCACCAACATTGTACTTTATTCTTAAGAATTCATCACACAAAGATCTATTAGTGACTGCATTAGAAAACATGAATGCCATTTGTTCGTCTTGTAACACTGAGAGGCATAGTTCTAAATTCTTAATGCAATTTTTAAGGTCAGAAGCTTTAGATTCATTGTCAGCAGCGATTACAGAAATAACAACTAATTTGAAGGATTCTTTTCGGACAGATGAAATTGAACGATCGCTCATAATAAGCTTGCAAATATCTCTTCACTTACTCGGGTTTGATTCTTCAGCAGAAATCTACGAGAACAGCAAAGATGATGTCATTGTTATGATGAGACAAATTTTAGACTATTATGAAGAAAAATTAGTCATACAAAAGGAAATAGAACCAGATTTAATCGACATTATTGAATCAATAAGCACTATAATCAACATTTTAAATCTAAATAATATATGTGACCTCACCAAATACTTTGATCACAGTTACAAAATGTGGAAAGCAGTTAATATGATAATGAAATCCGACAAAGATGGAGCTACTAATTTTGAGCAAGATGACAAAGTTGAGCTACTGGACTTTACTTCTAAAATAAAGGCTCCTCTGTGCACACTTATGTGCAATTATATGGCAACATGTTCAGACGAAAACTTGTTGAAGTGTTTAGATGTCATTGGTCAAGATTATGATGACATCATAACTTCATTAGACAAAGAAAAATTACACGATGAAGTGAACAAGAGAACAGAAAAATACAGAACTAGATTAAAAGAAAACATTGATTCCTAA

Protein

MKPEIDAKVEENDNPLPVGDVIGDTAYSERFVLKILIKLANLDTLKNEIKEKSFEEDLCMLWDMTAERDVVLFLQKHDSLNLINFALPMMDSPRLIEIMIGIVGNMCCQKEVVSSILKMDGFLIQLLEHSKCDDSLTLVQLLRLINSCLFLSNDSDIPILMTVFESVGYSPTLYFILKNSSHKDLLVTALENMNAICSSCNTERHSSKFLMQFLRSEALDSLSAAITEITTNLKDSFRTDEIERSLIISLQISLHLLGFDSSAEIYENSKDDVIVMMRQILDYYEEKLVIQKEIEPDLIDIIESISTIINILNLNNICDLTKYFDHSYKMWKAVNMIMKSDKDGATNFEQDDKVELLDFTSKIKAPLCTLMCNYMATCSDENLLKCLDVIGQDYDDIITSLDKEKLHDEVNKRTEKYRTRLKENIDS

Uniprot

H9J931 S4PSF8 A0A2H1VAU6 A0A2A4K805 A0A194PYY2 A0A194R3L4 + More
A0A212F1L8 A0A0L7LD05

Pubmed

19121390 23622113 26354079 22118469 26227816

EMBL

BABH01004521 GAIX01013863 JAA78697.1 ODYU01001572 SOQ37973.1 NWSH01000036 + More
PCG80405.1 KQ459584 KPI98542.1 KQ460855 KPJ11830.1 AGBW02010853 OWR47626.1 JTDY01001636 KOB73280.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000053240 UP000007151 UP000037510 + More

PRIDE

H9J931

Interpro

IPR016024 ARM-type_fold

SUPFAM

SSF48371 SSF48371

ProteinModelPortal

H9J931 S4PSF8 A0A2H1VAU6 A0A2A4K805 A0A194PYY2 A0A194R3L4 + More
A0A212F1L8 A0A0L7LD05

KEGG

101738131 no KO assigned | (RefSeq) protein saal1

GO

Length:

427

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05361

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00875

outside

1 - 427

Pi

184.855338

Theta

172.181683

Tajima's D

0.231541

CLR

89.25915

CSRT

0.438778061096945

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics