Gene

KWMTBOMO01717

Annotation

Uncharacterized_protein_OBRU01_02090_[Operophtera_brumata]

Location

Bomo_Chr4(-):2339884-2340764      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.101 Nuclear   Reliability : 2.21

CDS

ATGTCGCAATTATCTGCGATTGAGGTTGCTCAAAGAAACCTGGAAGAGAGCTTCACGAAAAGAATGGCCGATCTTGAGGCACAGCTTCATGCTGGAGGGCCTGCGAAGGATACAGTCTCCAAGGTTGCGGAGGAATTCCGAACATTCCGGGAACTTATATTCTCTATGTTGAAACTTCTTCGACAGCAGATTGGTGAGTGCACTCGACTGGTTGATGCGATCGAGACCAGACATCGTCGAAAAAACCTCATCTTTCTGGGAGTCCCTGAAGTTCAAAACGAAGACTGCACCGCTGCCATCTTGGATATTTTGCATAAAAAAATGCTTCTGAATACCTCTGCTGCTGACTTCAATGTGTGTCACCGTATAGGAGCTACTAATAAGGATCATCACCGCCCAATCCTGGTCAGATTGAAATGCTTAGATACACGGATGTCGATTTGGAGGACGAAGTCCAAACTTAAAAGTTCTCCTGTGTCCATCAAGGAATTCCTTACAAAATCTCGACAGGCGGTGTTCGGCAAGAGCCGTCAGTATTTTGGTGTGCGTCAATGTTGGACGCAAGACGGGGTCATTATTATCAAGACTGCGGATGGAAATCGTCACAGATTGACCACTATGGATGAGTTTAGCGACCTCGCAGTTAAATATCCTATTGTGGATGGTAAGCCAACATCAGCTAAGGGCAGCGTCTCTAAGGCGGCACCGGCTATCACTGTGAACTCGAAATTGCGGAAGACCTAG

Protein

MSQLSAIEVAQRNLEESFTKRMADLEAQLHAGGPAKDTVSKVAEEFRTFRELIFSMLKLLRQQIGECTRLVDAIETRHRRKNLIFLGVPEVQNEDCTAAILDILHKKMLLNTSAADFNVCHRIGATNKDHHRPILVRLKCLDTRMSIWRTKSKLKSSPVSIKEFLTKSRQAVFGKSRQYFGVRQCWTQDGVIIIKTADGNRHRLTTMDEFSDLAVKYPIVDGKPTSAKGSVSKAAPAITVNSKLRKT

Uniprot

A0A2A4JSS2   A0A2A4JIA9   A0A2A4JVB8   A0A2A4JVW6   A0A2A4J7K0   A0A2W1BKL8   + More
A0A2A4ISJ1   A0A2H1WT06   A0A0L7LT08   A0A2A4K0M9   A0A2A4JP60   A0A2W1BPW3   A0A2H1X0E0   A0A0L7LEM3   A0A2A4JPZ6   A0A2A4J0P1   A0A0L7K245   A0A0L7KIU7   A0A0L7KPM5   A0A2H1W7N3   A0A0L7KL53   A0A0L7KW56   A0A0L7K490   A0A0L7L318   A0A0L7L7Q1   A0A2W1C1G2   A0A0L7KXD0   H9JND1   A0A2W1B638   A0A0L7LRK8   A0A2A4JRK8   A0A2A4JNA4   A0A0L7KDU3   A0A2W1AYL0   A0A2A4JAE4   A0A2H1W136   A0A2H1VLT4   A0A0L7K1Y0   A0A2A4JF70   A0A0L7KWV6   A0A2W1BHY6   A0A0L7KMJ9   A0A0L7KZD4   A0A2A4JKL5   A0A2A4IZX0   A0A1S3DR71   A0A3Q0J8Z8   S4PY07   A0A3Q0IRU1   A0A1Y1KYD8   A0A0L7LN09   R7T3K5   R7UQ06   R7V3F8   R7TZD7   A0A1B6MF41   R7VDX2   R7VIK4   A0A210Q4D7   W4Z350  

Pubmed

28756777    26227816    19121390    23622113    28004739    23254933    + More
28812685   

EMBL

NWSH01000695    PCG74738.1    NWSH01001465    PCG71162.1    PCG71163.1    NWSH01000574    + More
PCG75564.1    NWSH01000512    PCG75926.1    NWSH01002863    PCG67420.1    KZ150083    PZC73827.1    NWSH01008089    PCG62701.1    ODYU01010789    SOQ56106.1    JTDY01000147    KOB78598.1    NWSH01000281    PCG77797.1    NWSH01000964    PCG73374.1    KZ149998    PZC75357.1    ODYU01012456    SOQ58773.1    JTDY01001444    KOB73845.1    NWSH01000800    PCG74117.1    NWSH01004248    PCG65306.1    JTDY01015832    KOB51930.1    JTDY01009601    KOB63242.1    JTDY01007405    KOB65227.1    ODYU01006869    SOQ49099.1    JTDY01009138    KOB64057.1    JTDY01005020    KOB67468.1    JTDY01010801    JTDY01009435    KOB57999.1    KOB63512.1    JTDY01003374    KOB69654.1    JTDY01002460    KOB71369.1    KZ149916    PZC77943.1    JTDY01004770    KOB67785.1    BABH01019446    BABH01019447    BABH01019448    BABH01019449    BABH01019450    KZ150731    PZC70355.1    JTDY01000235    KOB78128.1    NWSH01000709    PCG74665.1    NWSH01000981    PCG73266.1    JTDY01010087    KOB61249.1    KOB61251.1    KZ150737    PZC70349.1    NWSH01002122    PCG69097.1    ODYU01005692    SOQ46801.1    ODYU01003266    SOQ41795.1    JTDY01016995    KOB51870.1    NWSH01001639    PCG70611.1    JTDY01004815    JTDY01001265    KOB67717.1    KOB74342.1    KZ150113    PZC73314.1    JTDY01009052    KOB64154.1    JTDY01004162    KOB68510.1    NWSH01001172    PCG72268.1    NWSH01004711    PCG64730.1    GAIX01004118    JAA88442.1    GEZM01072435    JAV65521.1    JTDY01000521    KOB76815.1    AMQN01034318    KB312372    ELT87362.1    AMQN01021863    KB299252    ELU08188.1    AMQN01039534    KB295512    ELU13084.1    AMQN01026766    KB307322    ELT98997.1    GEBQ01005443    JAT34534.1    AMQN01017114    KB292747    ELU17043.1    AMQN01017617    KB293311    ELU16121.1    NEDP02005050    OWF43603.1    AAGJ04114800   

Proteomes

UP000218220    UP000037510    UP000005204    UP000079169    UP000014760    UP000242188    + More
UP000007110   

PRIDE

H9JND1   

Pfam

PF01582   TIR        + More
PF00027   cNMP_binding

Interpro

IPR004244   Transposase_22        + More
IPR035897   Toll_tir_struct_dom_sf       
IPR000157   TIR_dom       
IPR000595   cNMP-bd_dom       
IPR014710   RmlC-like_jellyroll       
IPR018490   cNMP-bd-like       

SUPFAM

SSF52200   SSF52200        + More
SSF51206   SSF51206       

Gene 3D

3.40.50.10140     2.60.120.10    

CDD

cd00038  CAP_ED

ProteinModelPortal

A0A2A4JSS2   A0A2A4JIA9   A0A2A4JVB8   A0A2A4JVW6   A0A2A4J7K0   A0A2W1BKL8   + More
A0A2A4ISJ1   A0A2H1WT06   A0A0L7LT08   A0A2A4K0M9   A0A2A4JP60   A0A2W1BPW3   A0A2H1X0E0   A0A0L7LEM3   A0A2A4JPZ6   A0A2A4J0P1   A0A0L7K245   A0A0L7KIU7   A0A0L7KPM5   A0A2H1W7N3   A0A0L7KL53   A0A0L7KW56   A0A0L7K490   A0A0L7L318   A0A0L7L7Q1   A0A2W1C1G2   A0A0L7KXD0   H9JND1   A0A2W1B638   A0A0L7LRK8   A0A2A4JRK8   A0A2A4JNA4   A0A0L7KDU3   A0A2W1AYL0   A0A2A4JAE4   A0A2H1W136   A0A2H1VLT4   A0A0L7K1Y0   A0A2A4JF70   A0A0L7KWV6   A0A2W1BHY6   A0A0L7KMJ9   A0A0L7KZD4   A0A2A4JKL5   A0A2A4IZX0   A0A1S3DR71   A0A3Q0J8Z8   S4PY07   A0A3Q0IRU1   A0A1Y1KYD8   A0A0L7LN09   R7T3K5   R7UQ06   R7V3F8   R7TZD7   A0A1B6MF41   R7VDX2   R7VIK4   A0A210Q4D7   W4Z350  

KEGG

105842510    no KO assigned | (RefSeq) PHD finger protein rhinoceros-like

GO

GO:0016021   GO:0007165  

PANTHER

PTHR11505  

Length:

247

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00061

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04278

outside

1  -  247

 

 

Pi

233.09764

Theta

106.569496

Tajima's D

3.489572

CLR

80.427219

CSRT

0.993150342482876

Interpretation

Uncertain