Gene

KWMTBOMO01707  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006026

Annotation

PREDICTED:_coiled-coil_and_C2_domain-containing_protein_1-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr4(-):2142867-2156404      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.187

CDS

ATGTTTAGAAATCAGAAACCGGCAAAAAAGGGGAATCTGTCGCAGTTTGGTCTGTTAGATATTCCTGATTTGGACGATGCAGATGATGAACCACTAAATCTATCTGATGATGATATTGATTTGGAAGCAGAATTGGCTGCCATTAGTGGTGGCACAAGCAGACAGAGACCAAAAAAGGCTCCACCATCAGCCAATCTCGATGCCATGATAGCTGAAAGTTTAAAGGATATACCTTCAGATGAGGATGTTGATGAAGGCGACGAAGATGATCCAGACTTATTGAATGAATTAAAAAACTTAGGCCTCGATGATGAAGCTCCTCCAGCACCTCCGCCTCGTTCTTCCCGTCCTGCGCCTCCTCCTCCTGGAGCTGATACTGGCATTGTGGGGGTTTTACAGGACAGAATTAATAATTATATGGCTGCAGAAAAACATGCAAAGGAAAAGGGTGAAAGCAGTAGGGCTAGAAGATTCAACCGAGGTATAAAGACTCTAAATGATCTACTAAAGCAAGCTAAAGCTGGTAAACCCATCAGCGAAGAAGACATTCCACCAGCCGTAAGTCTTGGAAAACCTGCTGATTCCACACCATCAGCACCACTCTCTGGTCCAGTACAACCACCAACAGACCCAGAGCCACTACTGATAGATCTTGGACACGAGGATCCTCCCAGTTTACCAGAACCGCAAGAACCACCGCCCAGTCTACCGGAACCAGAGGAGCCACCACTGCCTCCACCGCGAGCTGAAAGCTTACACCAAGCAGACGATACCCTCACTCCTGAGAGACAGCAGAAGCTGCAGGCAATATTGAAACGTCAAGCAGAGTTTAAAGCGGCGGCGTTGCACTGTAAAAAATCGGGGGATAAAGCATTAGCACTCGAGTTTTTGAAGACAGTGAAGCAGTTCGATGTTCTGGTGACTGCTTTCAAAACGACCACCGAGGGGATGGACTTCGATTTAGCCGATTTACCTACTTTGGAGTCGGTCGCCGCGACCCTCAAGAGCCCAAAGGCCGATGAACAAATGCAAAATTCCGGAGAACCAACACCAGCGTCGACTCCAGCCTCCACGGAGCTGATCACCGCCTCGACGGTGGAAGAAGCTTTACGACAGAGGCTAGCTTATTTTCAGCAACAAGAGTCAAAAGCGAAGGAAGATGGTAACTCGTCGAAGGCGCGTCGCATGGGGCGCATTGTGAAGCAGTACCAGGAGGCGGTGCGGCTGCACGCGGCCGGGAGGGCGCTGCCCGGGGACGAGCTGCCCACGCCGCCGGGGTACGCGCCCCTACCCGCTGATCCAGCTGAAGCACCGCGCCCCGCCCCGCCCGCACCCCGCCCCGCGGCTCCGTCCCCCTCCCCTGCGCCGTCCCCCTCCGCTGCCCCGCGCCCCTCGTCCGCCCGCTACGAGAAGCAGCTCGCGTACCTGTTGATGCGCCAGAAACAGTTCAAGGAGGCCGCATTGAAAGCTAAAAAAGAAGGTAATATTGAACAAGCAAAAGAGTATTTACGTGCAGCCAAAGGGTTCGATACGGTGATAGACGCCGCGAGAGGCGGCCTGCCGGTCGACCTCAAGTCTTTGCCCCTCCCGCCTAAAGCTAAAGAGAATTTAGAACACACTTTCGACATAGTGTCGAGTGAGGACTGCGGCCCGTCGGACGAGGTGGCCACCGTGCGCGGCGAGGACGGCGACGTGTGGGCGCGCCTGCAGCAGCAGCTAGGCTCGCAGCTGCAGCTGTGCCAGCGGAACCGGGACCACTGCAGCGCCACCGGACACATCGCGGAGGCGAACAGGTTCGAGCACCTCGCCGTTACGGTCGCGCAGGACCTGGACGTCGTGGCGGTCGCCAAAAGCCTGGGCCGCGGTCCGCCGAAGTTCCACTACGAGTCCCGGCAGTTCGCGGTGGCGCAGTGCAACACGGACCTCAACGAGAACGAGCTGCAGCTGACCGTGGTCCGCGGCATCGCGTACAACGTCGCCAACCCGCAAGACGTCGACACTTACGTCAAATTCGAATTCCCCTACCCCCCGGAGGCGCCGGCGACGGACTGCACGGCGGTGGTGAAGGACACGAACAGCCCGGACTACGGCGCGGTGTTCTCGCTGCCCATCCAGCGCGCCGCCCGCACCTGCCAGCGCGCCTTCAAGCGGCACGCACTCAAGCTGCACGTGTACTCCAGGGGCGGCTGGTTCTCGCGGGACGCGCTGCTCGGGACCGTGGTCGTCCGCCTCGCGCCGCTGGAGACGCACGTCACCCTGCACGAGGCCTTCCCGCTGATGGACGGGCGCCGCCCTGCCGGTGGCTCGCTCGAGGTCAAACTGAGGGTCCGGACTCCGATCCTGCACCAGCAGATCGAAAACACGACGCATCGGTGGCTCGTCATCGATAACTAA

Protein

MFRNQKPAKKGNLSQFGLLDIPDLDDADDEPLNLSDDDIDLEAELAAISGGTSRQRPKKAPPSANLDAMIAESLKDIPSDEDVDEGDEDDPDLLNELKNLGLDDEAPPAPPPRSSRPAPPPPGADTGIVGVLQDRINNYMAAEKHAKEKGESSRARRFNRGIKTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLLIDLGHEDPPSLPEPQEPPPSLPEPEEPPLPPPRAESLHQADDTLTPERQQKLQAILKRQAEFKAAALHCKKSGDKALALEFLKTVKQFDVLVTAFKTTTEGMDFDLADLPTLESVAATLKSPKADEQMQNSGEPTPASTPASTELITASTVEEALRQRLAYFQQQESKAKEDGNSSKARRMGRIVKQYQEAVRLHAAGRALPGDELPTPPGYAPLPADPAEAPRPAPPAPRPAAPSPSPAPSPSAAPRPSSARYEKQLAYLLMRQKQFKEAALKAKKEGNIEQAKEYLRAAKGFDTVIDAARGGLPVDLKSLPLPPKAKENLEHTFDIVSSEDCGPSDEVATVRGEDGDVWARLQQQLGSQLQLCQRNRDHCSATGHIAEANRFEHLAVTVAQDLDVVAVAKSLGRGPPKFHYESRQFAVAQCNTDLNENELQLTVVRGIAYNVANPQDVDTYVKFEFPYPPEAPATDCTAVVKDTNSPDYGAVFSLPIQRAARTCQRAFKRHALKLHVYSRGGWFSRDALLGTVVVRLAPLETHVTLHEAFPLMDGRRPAGGSLEVKLRVRTPILHQQIENTTHRWLVIDN

Uniprot

H9J934   A0A194PYX9   A0A212ELF8   A0A2A4JVH4   D6WKC8   A0A2A4JV28   + More
A0A1Y1LET1   A0A1Y1LA00   A0A2H1VKL3   A0A0T6B0P3   A0A1Y1LA18   A0A1Y1LA05   A0A2M4BDE7   A0A2M4AEX3   A0A2M4BDY6   A0A1Q3F686   A0A0L0CPN1   A0A182MYA9   A0A182K679   A0A182UCU7   Q17BV0   B0WWF2   W5JI35   A0A1Y1LFY4   A0A1Y1LC74   Q17BU9   A0A084WAV2   A0A1Q3F601   A0A182YF66   A0A1Q3F7A4   A0A1L8DB41   A0A1I8MMA6   T1PB41   A0A182P851   A0A1I8PLZ3   A0A0N1IT78   A0A182M0P2   A0A1I8MM95   A0A1I8PM59   A0A2R7X2H3   A0A195EBV3   F4WNH2   E2A806   A0A195FVZ6   A0A088A2G2   A0A1B0DAH3   A0A151IMA5   E9HDV2   A0A3L8E104   A0A158NTR3   A0A151WVK9   A0A195B7G7  

Pubmed

19121390    26354079    22118469    18362917    19820115    28004739    + More
26108605    17510324    20920257    23761445    24438588    25244985    25315136    21719571    20798317    21292972    30249741    21347285   

EMBL

BABH01004500    BABH01004501    BABH01004502    KQ459584    KPI98531.1    AGBW02014067    + More
OWR42326.1    NWSH01000590    PCG75473.1    KQ971342    EFA03599.1    PCG75474.1    GEZM01061437    JAV70485.1    GEZM01061440    JAV70482.1    ODYU01003080    SOQ41389.1    LJIG01016420    KRT80654.1    GEZM01061438    JAV70484.1    GEZM01061439    JAV70483.1    GGFJ01001938    MBW51079.1    GGFK01006018    MBW39339.1    GGFJ01001887    MBW51028.1    GFDL01012022    JAV23023.1    JRES01000096    KNC34137.1    CH477316    EAT43762.1    DS232145    EDS36044.1    ADMH02001479    ETN62429.1    GEZM01061435    JAV70486.1    GEZM01061441    JAV70481.1    EAT43763.1    ATLV01022269    KE525331    KFB47346.1    GFDL01012063    JAV22982.1    GFDL01011600    JAV23445.1    GFDF01010489    JAV03595.1    KA645183    AFP59812.1    KQ435881    KOX69851.1    AXCM01000355    KK856478    PTY25861.1    KQ979074    KYN22705.1    GL888237    EGI64165.1    GL437468    EFN70443.1    KQ981215    KYN44601.1    AJVK01029070    AJVK01029071    AJVK01029072    KQ977063    KYN06003.1    GL732625    EFX70110.1    QOIP01000001    RLU26306.1    ADTU01002813    ADTU01002814    ADTU01002815    ADTU01002816    KQ982706    KYQ51846.1    KQ976565    KYM80456.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000218220    UP000007266    UP000037069    + More
UP000075884    UP000075881    UP000075902    UP000008820    UP000002320    UP000000673    UP000030765    UP000076408    UP000095301    UP000075885    UP000095300    UP000053105    UP000075883    UP000078492    UP000007755    UP000000311    UP000078541    UP000005203    UP000092462    UP000078542    UP000000305    UP000279307    UP000005205    UP000075809    UP000078540   

PRIDE

H9J934   

Pfam

PF00168   C2

Interpro

IPR035892   C2_domain_sf        + More
IPR039725   CC2D1A/B       
IPR006608   DM14       
IPR000008   C2_dom       
IPR037772   C2_Freud       

Gene 3D

2.60.40.150    

CDD

cd08690  C2_Freud-1

ProteinModelPortal

H9J934   A0A194PYX9   A0A212ELF8   A0A2A4JVH4   D6WKC8   A0A2A4JV28   + More
A0A1Y1LET1   A0A1Y1LA00   A0A2H1VKL3   A0A0T6B0P3   A0A1Y1LA18   A0A1Y1LA05   A0A2M4BDE7   A0A2M4AEX3   A0A2M4BDY6   A0A1Q3F686   A0A0L0CPN1   A0A182MYA9   A0A182K679   A0A182UCU7   Q17BV0   B0WWF2   W5JI35   A0A1Y1LFY4   A0A1Y1LC74   Q17BU9   A0A084WAV2   A0A1Q3F601   A0A182YF66   A0A1Q3F7A4   A0A1L8DB41   A0A1I8MMA6   T1PB41   A0A182P851   A0A1I8PLZ3   A0A0N1IT78   A0A182M0P2   A0A1I8MM95   A0A1I8PM59   A0A2R7X2H3   A0A195EBV3   F4WNH2   E2A806   A0A195FVZ6   A0A088A2G2   A0A1B0DAH3   A0A151IMA5   E9HDV2   A0A3L8E104   A0A158NTR3   A0A151WVK9   A0A195B7G7  

PDB

6EI6     E-value=1.99721e-72,     Score=696

KEGG

101737117    K18260 coiled-coil and C2 domain-containing protein 1 | (RefSeq) coiled-coil and C2 domain-containin

GO

GO:0001227   GO:0005634   GO:0000122   GO:0005515   GO:0003676   GO:0006357   GO:0016592   GO:0006508   GO:0006811   GO:0016020   GO:0003779   GO:0016021  

PANTHER

PTHR13076  

Length:

797

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0016

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00028

outside

1  -  797

 

 

Pi

193.103408

Theta

176.945452

Tajima's D

0.382483

CLR

0.386323

CSRT

0.483975801209939

Interpretation

Uncertain