Gene
KWMTBOMO01701
Pre Gene Modal
BGIBMGA006027
Annotation
PREDICTED:_zinc_finger_protein_ush_isoform_X1_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 2.811
Sequence
CDS
ATGGCTTCTTTGTTTTTCTCGTTGTGTGAGGACGAGGAATGGGGAAACGAGAGCGAGGCGATGCCGGGAGAACCTCGCACGCCAAGCTCGGGGGGCGAACGACCTGCATCTAGTGGCGGCGCCTCGCCTGCTTCTGGGGGCTCACCGGCTGCTTCACCACCGCGACTACGCCTTAATACGAGCCTCGCGACTGACCCTGCCTTAGCACCGCAAGCAACATCGCTCAAACGTGAACCGCCCTCTCCTTCTCCTCCTCCGCCGCCTACACCAGCTACTCAGGCGCGTGAATACATTGCACTAACGGCTGCCGCTTTCCCTGGCCTGTTCCCGACAAACGCGGTGCCGGGCTACATCTGCAATCCGTGTGGTATCAGATACTCATCTCTAAGTACGCTCCAAGCACATCAAGCACATTATTGTGCGAACAGAAAACCTAAGCCTTCTGAGGCAACGGATGCATCAGCCTACGCTGCAGGTGATGACTCAAGTGGAGATTCAAAAACTTCAAAACCAGCAGGGAAGCAATACGCTTGCACATTATGTTCGTACAGTGCTGACAAAAAAGTCAGTTTGAACAGACATATGCGAATGCATTCTTCGTCCCCTGTCAGCAGCGGGACGCCCGCACCGGCGACGCCCACGTCCAATGGTGAAGCAACTGAGAGTCCCCAAGCTCAGGACCGATATTGTACCGATTGTGATATTCGCTTTAGCTCTACAAAAACATACAGAGCACATAAAGCTAACTACTGCAGCACCCGTCAAGTTGTCAAACAAGCTCTGCAGGCTATTAAAGGAAGCTCTGTAACGTCGGGCTCGGCTCCTCCATCACCGGGAGCGACACCACCAGCACAAAATCAATATGCTCTGGCGTTACCCACAAATCCAATACTTATCGTCCCGTATACGTTACTGCGCAGTGCCAGCACGCTTCCCGGGGCGACGCTGCCGGATCCGGATACTCCATGCTTCTTACTACCAAACGGTACATTCCAGCCTCTGACTCACATTTTACCCAATATCAATACAGATCCCAAAACACCGGAGGTCTTAAAATCTGCAAATCGAGCACGAGATTCCTCAAGAGATGGCACGACGCCTCTGGACCTCAGCGTGCGCCGTTCGCCGGAGTCTGTTGTGGTAGATGAACATGAAAAAGAAAACAGGATTCGTTCAACGACGCCGGAACAAATAGTTTGCGCGCCATCGCTGCCGGGCTCACCCGGGACACCGTCGCCTTCCCGACGTTCTTTGTCTCCAAGCGGCGAGAGTTCTCCAAAAAGACGACGGCGAAACTCTAGAGGACCAACACCGAAACCACCAAGTGTACCATCGCCGCCGGCAGTCCCACCTCCAATCATACCTCCCGCTTTAGCCATACGGCTTGCCTCAGAGCTGCCAGTAGCTGCTAAATCTCCTCAAGTTCTGGTCAAGCAAGGCGTATCGAAATGCAAAGAGTGCAATATAGTTTTTTGTATGTACGAGAACTATCGAGTACATAAGCAACGTTATTGCTCAGCCGGCGGGGGCGAAGAGCCAGCGAGCCCGGCGCCACCGGAGGCCGGGCCGCCGCCTCAGTATCGTCAACTGATATGCCTGGCCTGCGGTATTCACTTCAGTTCCTTGGATAATCTCACAACCCATCAATCATATTACTGCACGAAACGTGAAACCCGATCGTCGAGGTCCGTTCCCGAGTTACCGAGGCCGTCGTCGGGTACAGAGGGAGGATGGAAGTGTCCGTGCTGCGACGTGGTGTCGCCGACAGCGGCCGCGGCTCAGCGCCACATGGAGGCGCACGCCGGAGTGAAGGCGTTCAGGTGTACCATTTGCCGGTATAGGGGGAACACCCTACGAGGCATGCGCACACACATACGTATGCACTTCAACAACAAGAAACCAGCCGATTTACAGGAGGAGAGCTACATAGCATGCGTACTCGAAGACGAGAGCCGAGAAGCAACGTCTCCCAGTCCAGCAGTGGCAGGGGAGAGGGTCCATCGCTGCAGCAGTTGCGCGTACACATCCACATACAGGGGCAACGTAGTGCGCCACGCACGATTAGTCCACGCCACTGACGAGCCTGATGAGGAACAAACCTCACCCCTTCCGACCATTCCTACCCTGCCTGTGGATATTAAAAAGGAGCCAGACAACGACGCCGAAGAGACGCCTAATTACTGCAAATCTTGCGACATATCCTTTAAGTACGTGAACACTTACAAGGCGCACAAGCAGTACTATTGCACAGCAAACAATCAAGACGCGGCCGCGAACAACAACGTTCCGACCCCACCCAGGGTTAATGACACTCCCGTACTATGA
Protein
MASLFFSLCEDEEWGNESEAMPGEPRTPSSGGERPASSGGASPASGGSPAASPPRLRLNTSLATDPALAPQATSLKREPPSPSPPPPPTPATQAREYIALTAAAFPGLFPTNAVPGYICNPCGIRYSSLSTLQAHQAHYCANRKPKPSEATDASAYAAGDDSSGDSKTSKPAGKQYACTLCSYSADKKVSLNRHMRMHSSSPVSSGTPAPATPTSNGEATESPQAQDRYCTDCDIRFSSTKTYRAHKANYCSTRQVVKQALQAIKGSSVTSGSAPPSPGATPPAQNQYALALPTNPILIVPYTLLRSASTLPGATLPDPDTPCFLLPNGTFQPLTHILPNINTDPKTPEVLKSANRARDSSRDGTTPLDLSVRRSPESVVVDEHEKENRIRSTTPEQIVCAPSLPGSPGTPSPSRRSLSPSGESSPKRRRRNSRGPTPKPPSVPSPPAVPPPIIPPALAIRLASELPVAAKSPQVLVKQGVSKCKECNIVFCMYENYRVHKQRYCSAGGGEEPASPAPPEAGPPPQYRQLICLACGIHFSSLDNLTTHQSYYCTKRETRSSRSVPELPRPSSGTEGGWKCPCCDVVSPTAAAAQRHMEAHAGVKAFRCTICRYRGNTLRGMRTHIRMHFNNKKPADLQEESYIACVLEDESREATSPSPAVAGERVHRCSSCAYTSTYRGNVVRHARLVHATDEPDEEQTSPLPTIPTLPVDIKKEPDNDAEETPNYCKSCDISFKYVNTYKAHKQYYCTANNQDAAANNNVPTPPRVNDTPVL
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF00096 zf-C2H2
SUPFAM
SSF57667
SSF57667
ProteinModelPortal
PDB
1FU9
E-value=0.000622481,
Score=105
Ontologies
GO
PANTHER
Topology
Length:
774
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01187
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00053
outside
1 - 774
Population Genetic Test Statistics
Pi
220.358585
Theta
170.001158
Tajima's D
-0.738587
CLR
186.271071
CSRT
0.186890655467227
Interpretation
Uncertain
