Gene

KWMTBOMO01691

Pre Gene Modal

BGIBMGA006033

Annotation

C-type_lectin_6_[Bombyx_mori]

Location

Bomo_Chr4(-):1660618-1663328      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.563

CDS

ATGAAGCGAACAGATTATCTAAAATTATTAGCAAATCTGCAGTGTTCTGACGAAGCTGCATCTGTATCCAGATACCATTTAACGGAAAAATGCCACCGATCGAAACTTGGCATCGTGGCGTACGCCAATTATACGTCTCTGACCAGCTGCCAAAGACTTGGGCTTGAGAAAAAGGGTCTGGCTATTAATTTCAGTCCCCCTGAAGCTAGAAAAGTCGGTATGGGACACAGTTGTGAAGTTATGAATTGCGCCGAAACTGATGGTGGCCTGTCCTTAAAAAATGACACGAGATATGATTACTACACTTTGTACGCGAGACCAGTGCCGGACAAAAACTCTACTTGTGTTCCCACGATTGGCATGTTTCGTCTATTGCCACAGAAACTTAATTATACAGAAGCAGTCGAACAATGCAGGAACATAAGTGGAGTTCTTGCAGATATTAGCACTGACCAGAGAACTGATTCCTTGGGGCAGTTGCTAGCGGGATCCGGCAATGAAGCGGCTTTTGTTGGACTAAGAAGAAGTAACGGTAGTGTCTTTATAAATAGTCGAGGTACCACTCTAGATTGTACCACGTACCGCGCTTGGGCGCCGGGTCACCCGCGGCGGAACTCTACTAAGTTTGAATGTGTCCTCATCAGTCGACAAAAAACTTGGCTGTCCTCGGCTTGCTCGAAACGATATCCTGCATTATGCGAATTAAACCCCGGAGGGCCGTACAAGAAAGGATCCATATTTACTTCTGAGAAACGAAATGGTTCGTTGACCAATATAATTTACCGGAAATGA

Protein

MKRTDYLKLLANLQCSDEAASVSRYHLTEKCHRSKLGIVAYANYTSLTSCQRLGLEKKGLAINFSPPEARKVGMGHSCEVMNCAETDGGLSLKNDTRYDYYTLYARPVPDKNSTCVPTIGMFRLLPQKLNYTEAVEQCRNISGVLADISTDQRTDSLGQLLAGSGNEAAFVGLRRSNGSVFINSRGTTLDCTTYRAWAPGHPRRNSTKFECVLISRQKTWLSSACSKRYPALCELNPGGPYKKGSIFTSEKRNGSLTNIIYRK

Similarity

Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.

Uniprot

B3IYT3   H9J941   A0A2W1BNS8   A0A2A4K9F5   A0A194PZQ5   A0A212EJ34   + More
A0A194R6E7   A0A3Q0JJZ8   A0A2S2Q4A5   A0A1J1HZR0   A0A067RNP5   D6WJX9   A0A182SBL8   A0A2J7QVU4   A0A182M8J7   A0A182YNG7   A0A182GAM1   Q7QGG3   A0A2P8YWE4   A0A182P9H4   A0A182JID6   A0A182NER8   A0A182HGD0   A0A182VUK6   A0A1C7CZ33   A0A146L2F6   A0A182RAV8   A0A182X0P3   M9NKT2   Q16W54   B0WIQ7   N6TBX6   A0A182K5K3   A0A1W4WCB2   A0A1W7R794   E0VJM3   J9HIU0   B3MG90   A0A182U1N3   W5JEV2   A0A182QEH9   A0A336MN28   A0A182ULS6   B4J810   B4MP01   Q28X91   B4PBD6   Q9W142   A0A182F5L8   B3NQV1   A0A084VM64   U4U7U8   F4WB24   B4IH46   B4LJI4   A0A0J9RKQ9   B4H564   A0A0M4EF43   A0A151IA11   A0A158NRD5   A0A026X0G3   A0A151X646   A0A151J5V7   A0A3B0IZW5   A0A1B0FRC1   A0A195EXG1   A0A336KJ24   A0A1A9VN76   A0A1B0AH06   A0A0L7QWN5   B4KQ56   A0A1B0B6H2   A0A1A9YBJ7   A0A1A9WA45   A0A087ZUB9   A0A2A3EJP7   A0A310SCF8   A0A195BEE9   K7IYH5   A0A232EUF4   E2C0R9   A0A1I8NZI5   A0A0N0BJ08  

Pubmed

19121390    28756777    26354079    22118469    24845553    18362917    + More
19820115    25244985    26483478    12364791    14747013    17210077    29403074    20966253    26823975    23431819    17510324    23537049    20566863    17994087    20920257    23761445    15632085    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    24438588    21719571    22936249    21347285    24508170    30249741    20075255    28648823    20798317   

EMBL

AB444139    BAG54786.1    BABH01004466    KZ150052    PZC74390.1    NWSH01000011    + More
PCG80915.1    KQ459584    KPI98518.1    AGBW02014536    OWR41496.1    KQ460644    KPJ13237.1    GGMS01003380    MBY72583.1    CVRI01000037    CRK93451.1    KK852514    KDR22220.1    KQ971342    EFA04652.2    NEVH01009771    PNF32703.1    AXCM01002176    JXUM01051327    KQ561684    KXJ77810.1    AAAB01008835    EAA05729.4    PYGN01000320    PSN48577.1    APCN01004213    GDHC01017133    JAQ01496.1    JN797605    AFK83719.1    CH477575    EAT38798.1    DS231951    EDS28634.1    APGK01043873    KB741018    ENN75233.1    GEHC01000645    JAV47000.1    DS235226    EEB13579.1    EJY57799.1    CH902619    EDV37793.1    ADMH02001356    ETN62882.1    AXCN02000844    UFQT01001762    SSX31706.1    CH916367    EDW02240.1    CH963848    EDW73840.2    CM000071    EAL26425.2    CM000158    EDW92568.1    AE013599    AAF47235.2    CH954179    EDV57034.1    ATLV01014580    KE524975    KFB39058.1    KB632152    ERL89137.1    GL888056    EGI68579.1    CH480838    EDW49222.1    CH940648    EDW61552.1    CM002911    KMY96382.1    CH479210    EDW32900.1    CP012524    ALC40747.1    KQ978249    KYM96008.1    ADTU01023934    ADTU01023935    KK107054    QOIP01000004    EZA61496.1    RLU24129.1    KQ982494    KYQ55748.1    KQ979928    KYN18611.1    OUUW01000001    SPP73747.1    CCAG010022994    KQ981923    KYN32970.1    UFQS01000557    UFQT01000557    SSX04904.1    SSX25267.1    KQ414710    KOC62981.1    CH933808    EDW09184.1    JXJN01009095    KZ288223    PBC31985.1    KQ780345    OAD51953.1    KQ976504    KYM82961.1    NNAY01002130    OXU21992.1    GL451846    EFN78463.1    KQ435724    KOX78322.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000079169    + More
UP000183832    UP000027135    UP000007266    UP000075901    UP000235965    UP000075883    UP000076408    UP000069940    UP000249989    UP000007062    UP000245037    UP000075885    UP000075880    UP000075884    UP000075840    UP000075920    UP000075882    UP000075900    UP000076407    UP000008820    UP000002320    UP000019118    UP000075881    UP000192221    UP000009046    UP000007801    UP000075902    UP000000673    UP000075886    UP000075903    UP000001070    UP000007798    UP000001819    UP000002282    UP000000803    UP000069272    UP000008711    UP000030765    UP000030742    UP000007755    UP000001292    UP000008792    UP000008744    UP000092553    UP000078542    UP000005205    UP000053097    UP000279307    UP000075809    UP000078492    UP000268350    UP000092444    UP000078541    UP000078200    UP000092445    UP000053825    UP000009192    UP000092460    UP000092443    UP000091820    UP000005203    UP000242457    UP000078540    UP000002358    UP000215335    UP000008237    UP000095300    UP000053105   

PRIDE

B3IYT3    H9J941    Q9W142   

Pfam

PF00059   Lectin_C        + More
PF00211   Guanylate_cyc
PF16214   AC_N

Interpro

IPR016186   C-type_lectin-like/link_sf        + More
IPR001304   C-type_lectin-like       
IPR018378   C-type_lectin_CS       
IPR016187   CTDL_fold       
IPR029787   Nucleotide_cyclase       
IPR001054   A/G_cyclase       
IPR018297   A/G_cyclase_CS       
IPR032628   AC_N       

SUPFAM

SSF56436   SSF56436        + More
SSF55073   SSF55073       

Gene 3D

3.10.100.10     3.30.70.1230    

ProteinModelPortal

B3IYT3   H9J941   A0A2W1BNS8   A0A2A4K9F5   A0A194PZQ5   A0A212EJ34   + More
A0A194R6E7   A0A3Q0JJZ8   A0A2S2Q4A5   A0A1J1HZR0   A0A067RNP5   D6WJX9   A0A182SBL8   A0A2J7QVU4   A0A182M8J7   A0A182YNG7   A0A182GAM1   Q7QGG3   A0A2P8YWE4   A0A182P9H4   A0A182JID6   A0A182NER8   A0A182HGD0   A0A182VUK6   A0A1C7CZ33   A0A146L2F6   A0A182RAV8   A0A182X0P3   M9NKT2   Q16W54   B0WIQ7   N6TBX6   A0A182K5K3   A0A1W4WCB2   A0A1W7R794   E0VJM3   J9HIU0   B3MG90   A0A182U1N3   W5JEV2   A0A182QEH9   A0A336MN28   A0A182ULS6   B4J810   B4MP01   Q28X91   B4PBD6   Q9W142   A0A182F5L8   B3NQV1   A0A084VM64   U4U7U8   F4WB24   B4IH46   B4LJI4   A0A0J9RKQ9   B4H564   A0A0M4EF43   A0A151IA11   A0A158NRD5   A0A026X0G3   A0A151X646   A0A151J5V7   A0A3B0IZW5   A0A1B0FRC1   A0A195EXG1   A0A336KJ24   A0A1A9VN76   A0A1B0AH06   A0A0L7QWN5   B4KQ56   A0A1B0B6H2   A0A1A9YBJ7   A0A1A9WA45   A0A087ZUB9   A0A2A3EJP7   A0A310SCF8   A0A195BEE9   K7IYH5   A0A232EUF4   E2C0R9   A0A1I8NZI5   A0A0N0BJ08  

PDB

3G83     E-value=2.06536e-05,     Score=112

KEGG

100174847    no KO assigned | (RefSeq) CTL6, BmCTL6, BmLEL-3, Lel-3; C-type lectin 6

GO

GO:0030246   GO:0016021   GO:0016849   GO:0009190   GO:0035556   GO:0000166  

Length:

263

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02518

Exp number, first 60 AAs:

0.0246

Total prob of N-in:

0.09669

outside

1  -  263

 

 

Pi

288.626342

Theta

197.316374

Tajima's D

1.456533

CLR

0

CSRT

0.778561071946403

Interpretation

Uncertain