Gene

KWMTBOMO01690

Pre Gene Modal

BGIBMGA006034

Annotation

calcium_and_integrin_binding_protein_CIB_[Bombyx_mori]

Location

Bomo_Chr4(-):1657436-1659788      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.8

CDS

ATGGGTCAAGGAAAAAGCCAATTTACAGAAGAAGAACTACAAGACTATGAGGATCTCACGTACTTTACGAAGAAAGAAGTATTGTATGCTCACCAAAAATTCAAAGCTCTGGCACCTGAGAAAGTTGGGCACAATAAAAATGCTAAATTACCTATGGCCAAAGTGCTCACATATCCAGAACTTAAAGTGAATCCATTCAAAGATAGGATATGTAAGGTGTTCAGTTCCAGTAATGATGGAGATTGCACCTTTGAAGACTTCTTGGACATGATGTCAGTTTTCAGTGAGATGGCTCCTAAAGCAGTAAAAGCTGAACATGCATTTAGGATATTTGATTTTGATGGTGATGACATGATAGGCGTATCAGATTTACGTGAAGTAATACAGCGTCTGTGCGGACCGGAGTTAAAACTATCAGACTCAGAAATACAACAACTGGTGCAGAATGTTTTGGAAGAAGCAGATCTTGATGATGATGGAGCTCTCTCCTTTGCTGAGTTTGAACATATCATAGATAAGAGTTCTGATTTCTGCCATGCATTCCGAATCAGGCTTTAA

Protein

MGQGKSQFTEEELQDYEDLTYFTKKEVLYAHQKFKALAPEKVGHNKNAKLPMAKVLTYPELKVNPFKDRICKVFSSSNDGDCTFEDFLDMMSVFSEMAPKAVKAEHAFRIFDFDGDDMIGVSDLREVIQRLCGPELKLSDSEIQQLVQNVLEEADLDDDGALSFAEFEHIIDKSSDFCHAFRIRL

Uniprot

Q2F616   A0A2W1BJA8   A0A2A4KAH6   A0A1S6M472   I4DNU1   S4PM05   + More
H9J942   A0A0L7LH95   A0A194R5Z1   A0A151WYP7   A0A158P2Z9   A0A067REN5   E2AUN1   A0A1B6FR13   A0A0T6B2I7   A0A1B6KFG0   A0A1Y1KNI6   A0A139WI15   V5H0Y6   A0A3L8DQV1   A0A212EJ40   A0A232F8E0   K7J3T7   E0VJM0   A0A1B6CPG4   A0A0L7K2G8   A0A0K8TS38   A0A195CEE0   A0A195DPF2   F4X5F4   A0A195BNE3   A0A195EZ36   A0A0J7L569   A0A1B0GMU7   A0A1B0GKG0   A0A0C9RSC9   A0A2H1WN62   A0A1L8DW92   A0A2J7QVV7   Q17IW0   A0A182LUX7   A0A182RRL5   A0A182WHG1   A0A023EI62   N6TET7   A0A026W121   A0A2M4C0S8   A0A182VHW9   A0A182TKX6   A0A182X145   A0A182L093   Q7Q4L8   A0A182IBY3   J3JZ87   A0A2A3EML9   A0A2M3ZJD8   A0A2M4CTB6   A0A0L7QK37   A0A1W4WK49   A0A182QZS5   A0A182K5H8   A0A182P661   A0A088ADJ0   A0A1Q3FGD1   B0W8S6   A0A2M4AUK2   U5EZE3   A0A0V0G8A0   R4WNU4   A0A023FCK3   T1HPB1   A0A336M077   A0A1S3CTK2   A0A0A9XL40   E2BRZ0   A0A0P4VSZ7   A0A1W4WJ65   A0A182NUU2   A0A0A1WJF2   A0A0K8W1T1   A0A034W8E1   A0A182Y5I2   T1DQY5   W8BS87   A0A1L8DLT9   A0A1B6HXZ2   A0A1J1HRE3   A0A0N0BEQ2   A0A182GYS5   A0A182F2B9   A0A1B6KWN8   J9K310   C4WVJ8   A0A0K8R8E5   A0A3M6U3X9   A0A2P2IB89   R7T7Q4   A7RM01   A0A210PED7   A0A1E1XQU4  

Pubmed

28756777    22651552    26354079    23622113    19121390    26227816    + More
21347285    24845553    20798317    28004739    18362917    19820115    30249741    22118469    28648823    20075255    20566863    26369729    21719571    17510324    24945155    23537049    24508170    20966253    12364791    14747013    17210077    22516182    23691247    25474469    25401762    26823975    27129103    25830018    25348373    25244985    24495485    26483478    30382153    23254933    17615350    28812685    29209593   

EMBL

DQ311256    ABD36201.1    KZ150052    PZC74391.1    NWSH01000011    PCG80914.1    + More
KY460554    AQU15098.1    AK403139    KQ459584    BAM19581.1    KPI98517.1    GAIX01003785    JAA88775.1    BABH01004466    JTDY01001197    KOB74571.1    KQ460644    KPJ13238.1    KQ982649    KYQ52999.1    ADTU01007655    KK852514    KDR22217.1    GL442829    EFN62878.1    GECZ01017190    JAS52579.1    LJIG01016213    KRT81277.1    GEBQ01029818    GEBQ01010974    JAT10159.1    JAT29003.1    GEZM01080833    JAV62031.1    KQ971343    KYB27465.1    GALX01001973    JAB66493.1    QOIP01000005    RLU22563.1    AGBW02014536    OWR41495.1    NNAY01000665    OXU27101.1    DS235226    EEB13576.1    GEDC01022027    GEDC01011251    JAS15271.1    JAS26047.1    JTDY01017560    KOB51844.1    GDAI01000637    JAI16966.1    KQ977935    KYM98596.1    KQ980713    KYN14364.1    GL888716    EGI58310.1    KQ976432    KYM87550.1    KQ981905    KYN33478.1    LBMM01000704    KMQ97698.1    AJVK01004164    AJWK01028824    GBYB01010301    GBYB01010302    JAG80068.1    JAG80069.1    ODYU01009823    SOQ54505.1    GFDF01003395    JAV10689.1    NEVH01009771    PNF32702.1    CH477236    EAT46633.1    AXCM01003806    GAPW01004816    JAC08782.1    APGK01040757    KB740984    KB631904    ENN76278.1    ERL87104.1    KK107526    EZA49281.1    GGFJ01009752    MBW58893.1    AAAB01008964    EAA12727.2    APCN01000760    BT128568    AEE63525.1    KZ288206    PBC33053.1    GGFM01007844    MBW28595.1    GGFL01004418    MBW68596.1    KQ415041    KOC58881.1    AXCN02000745    GFDL01008436    JAV26609.1    DS231860    EDS39305.1    GGFK01011156    MBW44477.1    GANO01000952    JAB58919.1    GECL01001957    JAP04167.1    AK417336    BAN20551.1    GBBI01000194    JAC18518.1    ACPB03014848    UFQT01000240    SSX22243.1    GBHO01028766    GBHO01028763    GBHO01022962    GBHO01022960    GBRD01012148    GBRD01012146    GBRD01012145    GBRD01001216    GDHC01004344    JAG14838.1    JAG14841.1    JAG20642.1    JAG20644.1    JAG53676.1    JAQ14285.1    GL450107    EFN81506.1    GDKW01000970    JAI55625.1    GBXI01015315    JAC98976.1    GDHF01007245    JAI45069.1    GAKP01008909    JAC50043.1    GAMD01002194    JAA99396.1    GAMC01002335    JAC04221.1    GFDF01006774    JAV07310.1    GECU01028182    GECU01012705    JAS79524.1    JAS95001.1    CVRI01000010    CRK89046.1    KQ435824    KOX72231.1    JXUM01098082    KQ564393    KXJ72343.1    GEBQ01024132    JAT15845.1    ABLF02028424    AK341548    BAH71918.1    GADI01006371    JAA67437.1    RCHS01002300    RMX48296.1    IACF01005695    LAB71278.1    AMQN01014763    AMQN01014764    KB311248    ELT89640.1    DS469519    EDO47515.1    NEDP02076749    OWF34844.1    GFAA01001759    JAU01676.1   

Proteomes

UP000218220    UP000053268    UP000005204    UP000037510    UP000053240    UP000075809    + More
UP000005205    UP000027135    UP000000311    UP000007266    UP000279307    UP000007151    UP000215335    UP000002358    UP000009046    UP000078542    UP000078492    UP000007755    UP000078540    UP000078541    UP000036403    UP000092462    UP000092461    UP000235965    UP000008820    UP000075883    UP000075900    UP000075920    UP000019118    UP000030742    UP000053097    UP000075903    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000242457    UP000053825    UP000192223    UP000075886    UP000075881    UP000075885    UP000005203    UP000002320    UP000015103    UP000079169    UP000008237    UP000075884    UP000076408    UP000183832    UP000053105    UP000069940    UP000249989    UP000069272    UP000007819    UP000275408    UP000014760    UP000001593    UP000242188   

PRIDE

Q2F616    H9J942   

Pfam

PF13499   EF-hand_7

Interpro

IPR018247   EF_Hand_1_Ca_BS        + More
IPR002048   EF_hand_dom       
IPR011992   EF-hand-dom_pair       
IPR018378   C-type_lectin_CS       
IPR016186   C-type_lectin-like/link_sf       
IPR001304   C-type_lectin-like       
IPR016187   CTDL_fold       

SUPFAM

SSF47473   SSF47473        + More
SSF56436   SSF56436       

Gene 3D

3.10.100.10    

CDD

cd00051  EFh

ProteinModelPortal

Q2F616   A0A2W1BJA8   A0A2A4KAH6   A0A1S6M472   I4DNU1   S4PM05   + More
H9J942   A0A0L7LH95   A0A194R5Z1   A0A151WYP7   A0A158P2Z9   A0A067REN5   E2AUN1   A0A1B6FR13   A0A0T6B2I7   A0A1B6KFG0   A0A1Y1KNI6   A0A139WI15   V5H0Y6   A0A3L8DQV1   A0A212EJ40   A0A232F8E0   K7J3T7   E0VJM0   A0A1B6CPG4   A0A0L7K2G8   A0A0K8TS38   A0A195CEE0   A0A195DPF2   F4X5F4   A0A195BNE3   A0A195EZ36   A0A0J7L569   A0A1B0GMU7   A0A1B0GKG0   A0A0C9RSC9   A0A2H1WN62   A0A1L8DW92   A0A2J7QVV7   Q17IW0   A0A182LUX7   A0A182RRL5   A0A182WHG1   A0A023EI62   N6TET7   A0A026W121   A0A2M4C0S8   A0A182VHW9   A0A182TKX6   A0A182X145   A0A182L093   Q7Q4L8   A0A182IBY3   J3JZ87   A0A2A3EML9   A0A2M3ZJD8   A0A2M4CTB6   A0A0L7QK37   A0A1W4WK49   A0A182QZS5   A0A182K5H8   A0A182P661   A0A088ADJ0   A0A1Q3FGD1   B0W8S6   A0A2M4AUK2   U5EZE3   A0A0V0G8A0   R4WNU4   A0A023FCK3   T1HPB1   A0A336M077   A0A1S3CTK2   A0A0A9XL40   E2BRZ0   A0A0P4VSZ7   A0A1W4WJ65   A0A182NUU2   A0A0A1WJF2   A0A0K8W1T1   A0A034W8E1   A0A182Y5I2   T1DQY5   W8BS87   A0A1L8DLT9   A0A1B6HXZ2   A0A1J1HRE3   A0A0N0BEQ2   A0A182GYS5   A0A182F2B9   A0A1B6KWN8   J9K310   C4WVJ8   A0A0K8R8E5   A0A3M6U3X9   A0A2P2IB89   R7T7Q4   A7RM01   A0A210PED7   A0A1E1XQU4  

PDB

2LM5     E-value=2.04515e-35,     Score=369

KEGG

692869    K17259 calcium and integrin-binding protein 1 | (RefSeq) calcium and integrin binding protein CIB

GO

GO:0007229   GO:0005509   GO:0016301   GO:0008168   GO:0006468   GO:0006355   GO:0006508   GO:0006811   GO:0016020   GO:0005515   GO:0003779   GO:0016021  

Length:

185

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.12008

outside

1  -  185

 

 

Pi

241.256332

Theta

200.841183

Tajima's D

0.649517

CLR

0.617901

CSRT

0.552122393880306

Interpretation

Uncertain