SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01688  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006115
Annotation
PREDICTED:_oligosaccharyltransferase_complex_subunit_ostc-A-like_[Plutella_xylostella]
Location in the cell
Mitochondrial   Reliability : 1.084
 

Sequence

CDS
ATGGAAGGGCTATTTGCAATACCGTTTACAGTTTTGGAAATTCCAAACATAAAAATTAAGAAACCAACATGGCTTCAAGCTCCGTCTGCCATGACAACCTTTTCACTGGTGTTACTCTCTTACTTTTTGGTTACTGGAGGTATTATTTATGATGTGATAGTCGAGCCACCGAGCGTGGGTTCAACGACCGATGAACATGGACACAGCAGACCTGTAGCCTTCATGCCGAATCGTGTTAATGGTCAGTACATCATGGAAGGTCTTGCGTCGAGCTTTCTCTTCTCACTCGGAGGGCTTGGCTTCATAATACTAGACCGCACACACAACCCGACCACACCAAAACTGAATCGAATTCTCCTTATCTCTGTGGCGTTCCTATGTATTTTAGTGTCATTCTTTACCACTTGGATATTCATGCGTATGAAGTTGCCAGGATATTTACAGAATTAA
Protein
MEGLFAIPFTVLEIPNIKIKKPTWLQAPSAMTTFSLVLLSYFLVTGGIIYDVIVEPPSVGSTTDEHGHSRPVAFMPNRVNGQYIMEGLASSFLFSLGGLGFIILDRTHNPTTPKLNRILLISVAFLCILVSFFTTWIFMRMKLPGYLQN

Summary

EMBL
BABH01004465    KZ150052    PZC74392.1    NWSH01000011    PCG80913.1    KF803650    + More
AII16891.1    GAIX01000166    JAA92394.1    AGBW02014536    OWR41494.1    JTDY01001197    KOB74573.1    ODYU01009823    SOQ54506.1    AK401973    KQ459584    BAM18595.1    KPI98516.1    KQ460644    KPJ13239.1    PYGN01000320    PSN48589.1    GEBQ01009545    JAT30432.1    GECU01002468    JAT05239.1    KQ971343    KYB27464.1    GEZM01080833    JAV62030.1    KK852514    KDR22216.1    DQ440479    CH477236    ABF18512.1    EAT46634.1    GFDL01009219    JAV25826.1    GBHO01028765    GBRD01001215    GDHC01014840    JAG14839.1    JAG64606.1    JAQ03789.1    ATLV01014404    KE524970    KFB38682.1    DS231860    EDS39306.1    JH431980    LJIG01016213    KRT81275.1    GADI01000377    JAA73431.1    GGFJ01010244    MBW59385.1    GFJQ02007025    JAV99944.1    KK854460    PTY16029.1    GGLE01004097    MBY08223.1    GGFK01007274    MBW40595.1    AAAB01008964    EAA12661.3    AXCM01003806    APCN01000760    GL732609    EFX71552.1    GEFH01000333    JAP68248.1    GEDV01010627    JAP77930.1    GEMB01002438    JAS00747.1    GFPF01010359    MAA21505.1    GGFK01007232    MBW40553.1    GDIP01124711    JAL79003.1    GDIP01057069    JAM46646.1    GAMD01000289    JAB01302.1    GDIP01169291    JAJ54111.1    GANO01001343    JAB58528.1    LRGB01001361    KZS12689.1    AXCN02000745    ACPB03014848    GAHY01000848    JAA76662.1    GGFM01008474    MBW29225.1    GDIP01097117    JAM06598.1    JR050844    AEY61366.1    GDIP01141959    JAL61755.1    GDIP01157347    JAJ66055.1    GDIQ01225069    JAK26656.1    GFWV01008885    MAA33614.1    GDIQ01177734    JAK73991.1    GDIQ01006990    JAN87747.1    GDIP01130962    JAL72752.1    GGFL01001210    MBW65388.1    AJVK01021192    LBMM01000704    KMQ97697.1    GL888716    EGI58309.1    ADTU01007656    GBBL01002175    JAC25145.1    APGK01040757    KB740984    KB631904    ENN76279.1    ERL87105.1    GBBM01005760    JAC29658.1    JO841206    AEO32823.1    GBBK01004534    JAC19948.1    GDIQ01057280    JAN37457.1    NNAY01000665    OXU27108.1    IAAA01004347    LAA02883.1    MWRG01000418    PRD36161.1    GDIP01022825    JAM80890.1    KK116599    KFM68215.1    GACK01002987    JAA62047.1    AJWK01005641    GFDF01011244    JAV02840.1    GBYB01004027    JAG73794.1    GDIP01237253    JAI86148.1    GDIP01189454    JAJ33948.1    GFAC01007778    JAT91410.1    GDIP01120506    JAL83208.1    GDIQ01177735    JAK73990.1    AMQN01005281    KB295624    ELU12822.1    KK107526    EZA49282.1    EU934252    ACI30030.1    KQ980713    KYN14363.1   
Pfam
PF04756   OST3_OST6
Interpro
IPR021149   OligosaccharylTrfase_OST3/OST6       
PDB
6FTJ     E-value=2.7511e-38,     Score=392

Ontologies

Topology

Length:
149
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
66.46211
Exp number, first 60 AAs:
21.41203
Total prob of N-in:
0.94302
POSSIBLE N-term signal
sequence
inside
1  -  31
TMhelix
32  -  54
outside
55  -  81
TMhelix
82  -  104
inside
105  -  116
TMhelix
117  -  139
outside
140  -  149
 
 

Population Genetic Test Statistics

Pi
342.978202
Theta
186.122354
Tajima's D
2.681411
CLR
0
CSRT
0.958802059897005
Interpretation
Uncertain
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