Silkworm Genome Informatics Database

Gene

KWMTBOMO01687

Pre Gene Modal

BGIBMGA006035

Annotation

Protein-like_protein_[Operophtera_brumata]

Location

Bomo_Chr4(-):1644880-1645888 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.291

CDS

ATGGAATGTGGATATATCATTAATTCTACGATGAAGGGTGGACTGTGTATCATCTACACGTCTTTGCTGACTATTTCCGTGATTTCTAGTTGTGCACTCTTTATTCTTGTTGTCTCAGAGGCTCTAAACGAGGGTGTAGATAAGAGCGTTGACCTATCAGGCCTTCACAATGTTAGCCAGAAGAGTAGCACTATCAGTAATGATGAGGTTGATGAACCAAATATACCGGCAGAAGTTTCACAATTTGCACACACCGAGCCAGTGGAAGCACAGGAACCTGAGAGACAAGAGATGACCTTCCCTGAGTCATTGTCTCTGAACTCTGTGACCACTGATGGACAATTCAATGTTTTTGTTAAGGAACAGGATAGAGGCAACATTATTTGGCTCTTCTGA

Protein

MECGYIINSTMKGGLCIIYTSLLTISVISSCALFILVVSEALNEGVDKSVDLSGLHNVSQKSSTISNDEVDEPNIPAEVSQFAHTEPVEAQEPERQEMTFPESLSLNSVTTDGQFNVFVKEQDRGNIIWLF

Uniprot

H9J943 A0A2A4KB70 A0A2W1BRK7 A0A0L7LGM6 A0A194Q528 A0A212EJ16 + More
A0A194R7M6 S4P4U2

Pubmed

19121390 28756777 26227816 26354079 22118469 23622113 + More

EMBL

BABH01004465 NWSH01000011 PCG80912.1 KZ150052 PZC74393.1 JTDY01001197 + More
KOB74570.1 KQ459584 KPI98515.1 AGBW02014536 OWR41493.1 KQ460644 KPJ13240.1 GAIX01007511 JAA85049.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000053268 UP000007151 UP000053240 + More

PRIDE

H9J943

Pfam

PF07738 Sad1_UNC

Interpro

IPR008979 Galactose-bd-like_sf + More
IPR012919 SUN_dom

SUPFAM

SSF49785 SSF49785

ProteinModelPortal

H9J943 A0A2A4KB70 A0A2W1BRK7 A0A0L7LGM6 A0A194Q528 A0A212EJ16 + More
A0A194R7M6 S4P4U2

KEGG

101735970 no KO assigned | (RefSeq) SUN domain-containing ossification factor

GO

GO:0016021

Length:

131

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.20655

Exp number, first 60 AAs:

23.20618

Total prob of N-in:

0.61366

POSSIBLE N-term signal

sequence

outside

1 - 14

TMhelix

15 - 37

inside

38 - 131

Pi

409.347903

Theta

218.797518

Tajima's D

2.687774

CLR

0.40046

CSRT

0.962001899905005

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics