Gene

KWMTBOMO01685

Pre Gene Modal

BGIBMGA006036

Annotation

PREDICTED:_SUN_domain-containing_ossification_factor_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr4(-):1557012-1564662      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.014

CDS

ATGTCGCCGCCGCGGGCGCTGCTTGCGGCTCTGCTAATATGTCAGCTGTTGTCGTACGGTGGCCACCAGGGACTGACCAAGATATTTTACACATTACCTGACACAGGGCAGCCTCCGGTTCTTATATCGTTCGGGGATAACGCGAAATTGGACCTGGGCAATACGGATGAACTAATGTTCGTAAATGACTCCGACGAGCACAACGACACCAAGGCATTTTCAATCGTCGACACCGATACAATAAAGGTTGAAAGTGAAACAGACAGTTTAGAGGACAAGCCAAGCACAGAACCGAGACTGGTTGTGAAAGCGGTCCCCAAACATGAACTGAAACAAACAGAAGATGCATCTCAACCAGACGGAGAAGTCTTAGAATCTCAAGTTGAAGAACAAATAGATGAAGAACCGGTTCACGTTCCAGTCAAACCGGAAACCCCGCAAGAAGACATCCCCTCGTTTTCGGAGTGGGCGCAGAAACAACTCGCCGAGGCAGAGAAACAGGACACAGTACTGAATCACTCGAGTCAACCTAGTCATAGTAATACTAATTTTAGTAGTAAGAGCGTGAAGTTGCGGTCGAAGAACTACGCGTCGCTGGCGTGCGGCGCCAAGGTCGTCGCCGTCAACCCGGAGGCGGGCTCGCCCAGCTCCATCCTCTCACCCAACCGGGACGAGTACATGCTCAACACGTGCAACAGTCGCATTTGGTTCGTCGTCGAACTCTGCGAAGCTGTTCAAGCTCAAAAAATAGAGATAGCCAACTTCGAGTTGTTTTCTTCAACTCCCAAAGACATCGCCGTTTACTTTAGCGATCGGTTCCCGACGAGAGACTGGGCTAGCGTCGGACAGTTCACCGCCCAAGACATGAGAGACGTGCAAAGCTTCGACCTGTACCCACATCTATTCGGCAAGTTCATAAAAGTCGAGATGCTTTCGCATCACGGCTCGGAGCATTACTGTCCGATTTCGCTGTTCAAAGTGTACGGCACTTCAGAGTTCGAGGTGCTAGAGAAGGAGAATTCGCAACATCCCGCTCATATCGACGAGGACGAAGACGACGAGATAATAGACGTTCCCGACGTGCCGGCCGCCGAGACGGAGCCCTCCAAGAACCTGTTCGGGTCCGCGCGGGACGCCGTCATGTCCATTATGAAGAAGGCGGCCCAGGCGTTAGTCAAAACGGAAGTTCCTAAAAACGTGTCGTCCGAACACAACGACACGTTGGCAGACGACGCGTACAGACGCTGTTGCTCTCCCAGCCATATTATAGTGTGTGATAATTGCAGTGAGTCGCTGTACAATGACGTATACGAACTCATTAGTTGTAACTCGGACAAATTAGTTAGTTTAATGCGTCAAGGATTCCTCCGCGATACCTTGAAGTGTACTGGCATCTGCCAACAGTTCGGTTTAGATTTTAAAAGTACAAAGACAATAGAGTTTAGTGATGAGCGTGTCGCTTACATGAACGCGTTATTCCCGCAAAAGTATTTAGCCGCCTTGTGTAATATATTAGCGATAAAAGAGAAGAAGGTCGTTTTGAATACGAGCTTTGAAAACGAACATAACGTTACTAGTGATAATAGTACTGAAGAGTCGCCGCAGGTCGTGAATAGCGGAACTAACGGCGAACAAGAGATCAAGTTGGCTCCCGACAATAGCAACGGCTCCGATGATAAAATCAATGAAACAACGCAAAGTGATGAGATACCAATTGATACGCTCAACGATAGCAGCACGTTACCTGTGGAACTTCTCCCAGAAGAAGTTGACAACATGGAGGATAAGAAAGAAGACGTTATCGTCGCAGAGGAGACTTCAGGAGATGAACCCCAAGAATTTATAGCACCAAATATTGATAAATCTATAGAAATAGCGACGGAGCAAGAAAACAAAGATGGACTTTTGAAAACAAAAATTGAAAACGGCAAGGAAATCACAGAGAAGAGAGACGGCAATGGCGAGGAGTCGAATGATCAGCTGATGATGGAGAATGACAATTTCATTTCGGATATCGATCAGATAGCCGCGGACCCCGCGCCGCCCGGCGCTCCCAACACGCAGAACCAAAATCAGCAGCAGACCACTCTGCAGAAGGAATCTGTTTTTTTGCGTCTCTCTAACAGAGTAAAGACCCTAGAACGCAACATGTCTCTATCGGGACAATACTTAGAAGAGTTGAGCAGGAGGTACAAGAGACAAGTGGAAGAGATGCAGAAGACTTTCGAGAAGACTGTCCAGCAGATGACAGAGGAGAAGAAGAAAACAAATGAACGAGAACAGAAATACTTGGAACAAATGAGCAATCTCCAGGAACAGCTGGCCCAGATGACGTCAGCAATGCACGTACTCATGGAAGAGAGAGACAGCTGGTTCGGAAACATTAACTTCTTCAGATTCATCATCTTCCAAGCTATCATTGTGGCTCTAGTTATATACTACGTCTCGAAACGAAGAAGAATCGAACCGATATTAGTTCCGGTTCCGAGAAAAACAAGAAAGAAACAGGACAAGTTGAGGCGGAAATCTGTCGAAGGGGTCAGCGGACACGCCACGCCTTCCACCAAGAAACGGAGACCCAGCGAGGAGGCTCTGCAGATAGCCAGACAAGCCATTGAGGACACCAAGGGCAGCAACGAAGGAGAGTGGCAGGTGGCTCGTAAGAACAGAAGGAGAAAAACTTGTATAGTACTTAACGCGGAGACAGCAGCCAAGAGTTGGACGCGGCAGGACAGCATCGGGAAGCTGCAGGAGAACACCATAACCTTGGATGATGACGAGTACGTGGCGCCCGTGTCCGAGCCCAAGCAGTTTAACGCGGACGTGGAGCCGCCCAAACCGGACTACACCAAGACGAATGGCTTCTTCAACAACTTGAAAACAAAAACCATGAAGACCAGGAGACTGTCATCACCTGCATTTTTGCGAACGTTCAGCCGCCAGAGCACCAGGAGCACGCCCAGCCCCGTCGTGAGGAGTGAGGAGCCGATCTTCAACGGGAACGCAAAGAAGAAGGCCGCCTCAGAGTCACCCACCGGGAGTCTCTGGTCGGAGTCCACGGAGTTGTCCCCGCAGGACAGCGAGAGCAGTGGCAGTAAAAAAAAGAAAAGTCTGAAGAATATATTGAAGAAAGTGTTTTAA

Protein

MSPPRALLAALLICQLLSYGGHQGLTKIFYTLPDTGQPPVLISFGDNAKLDLGNTDELMFVNDSDEHNDTKAFSIVDTDTIKVESETDSLEDKPSTEPRLVVKAVPKHELKQTEDASQPDGEVLESQVEEQIDEEPVHVPVKPETPQEDIPSFSEWAQKQLAEAEKQDTVLNHSSQPSHSNTNFSSKSVKLRSKNYASLACGAKVVAVNPEAGSPSSILSPNRDEYMLNTCNSRIWFVVELCEAVQAQKIEIANFELFSSTPKDIAVYFSDRFPTRDWASVGQFTAQDMRDVQSFDLYPHLFGKFIKVEMLSHHGSEHYCPISLFKVYGTSEFEVLEKENSQHPAHIDEDEDDEIIDVPDVPAAETEPSKNLFGSARDAVMSIMKKAAQALVKTEVPKNVSSEHNDTLADDAYRRCCSPSHIIVCDNCSESLYNDVYELISCNSDKLVSLMRQGFLRDTLKCTGICQQFGLDFKSTKTIEFSDERVAYMNALFPQKYLAALCNILAIKEKKVVLNTSFENEHNVTSDNSTEESPQVVNSGTNGEQEIKLAPDNSNGSDDKINETTQSDEIPIDTLNDSSTLPVELLPEEVDNMEDKKEDVIVAEETSGDEPQEFIAPNIDKSIEIATEQENKDGLLKTKIENGKEITEKRDGNGEESNDQLMMENDNFISDIDQIAADPAPPGAPNTQNQNQQQTTLQKESVFLRLSNRVKTLERNMSLSGQYLEELSRRYKRQVEEMQKTFEKTVQQMTEEKKKTNEREQKYLEQMSNLQEQLAQMTSAMHVLMEERDSWFGNINFFRFIIFQAIIVALVIYYVSKRRRIEPILVPVPRKTRKKQDKLRRKSVEGVSGHATPSTKKRRPSEEALQIARQAIEDTKGSNEGEWQVARKNRRRKTCIVLNAETAAKSWTRQDSIGKLQENTITLDDDEYVAPVSEPKQFNADVEPPKPDYTKTNGFFNNLKTKTMKTRRLSSPAFLRTFSRQSTRSTPSPVVRSEEPIFNGNAKKKAASESPTGSLWSESTELSPQDSESSGSKKKKSLKNILKKVF

Uniprot

H9J944   A0A2H1WNB8   A0A2W1BRK7   A0A2A4KB70   A0A194Q0J1   A0A0L7L992   + More
A0A194RBG4   A0A212EJ41   A0A139WHM5   A0A139WHM0   E2BQP7   A0A0J7L2Y7   A0A1Y1LXV7   A0A1B6E7E5   A0A1B6BXW7   A0A1B6DYA5   A0A1B6E2D1   A0A0N0U7F7   A0A310SN20   A0A2R7VPZ1   A0A023EYJ1   A0A146L160   A0A146MGE9   T1HPP7   A0A146LWK8   A0A2S2R5X9   A0A336LJL6   A0A336LNX1  

Pubmed

19121390    28756777    26354079    26227816    22118469    18362917    + More
19820115    20798317    28004739    25474469    26823975   

EMBL

BABH01004457    ODYU01009823    SOQ54507.1    KZ150052    PZC74393.1    NWSH01000011    + More
PCG80912.1    KQ459584    KPI98514.1    JTDY01002109    KOB72083.1    KQ460644    KPJ13241.1    AGBW02014536    OWR41491.1    KQ971343    KYB27462.1    KYB27463.1    GL449798    EFN81966.1    LBMM01001165    KMQ96794.1    GEZM01044286    JAV78329.1    GEDC01003524    JAS33774.1    GEDC01031187    JAS06111.1    GEDC01026899    GEDC01017845    GEDC01006644    JAS10399.1    JAS19453.1    JAS30654.1    GEDC01005203    JAS32095.1    KQ435711    KOX79424.1    KQ759840    OAD62645.1    KK854016    PTY09419.1    GBBI01004530    JAC14182.1    GDHC01017647    JAQ00982.1    GDHC01000793    JAQ17836.1    ACPB03001465    GDHC01006558    JAQ12071.1    GGMS01016264    MBY85467.1    UFQS01000037    UFQT01000037    SSW97988.1    SSX18374.1    SSW97987.1    SSX18373.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000037510    UP000053240    UP000007151    + More
UP000007266    UP000008237    UP000036403    UP000053105    UP000015103   

PRIDE

H9J944   

Pfam

PF07738   Sad1_UNC        + More
PF00998   RdRP_3
PF04527   Retinin_C

Interpro

IPR012919   SUN_dom        + More
IPR008979   Galactose-bd-like_sf       
IPR002166   RNA_pol_HCV       
IPR007614   Retinin_C       

SUPFAM

SSF49785   SSF49785       

Gene 3D

2.60.120.260    

ProteinModelPortal

H9J944   A0A2H1WNB8   A0A2W1BRK7   A0A2A4KB70   A0A194Q0J1   A0A0L7L992   + More
A0A194RBG4   A0A212EJ41   A0A139WHM5   A0A139WHM0   E2BQP7   A0A0J7L2Y7   A0A1Y1LXV7   A0A1B6E7E5   A0A1B6BXW7   A0A1B6DYA5   A0A1B6E2D1   A0A0N0U7F7   A0A310SN20   A0A2R7VPZ1   A0A023EYJ1   A0A146L160   A0A146MGE9   T1HPP7   A0A146LWK8   A0A2S2R5X9   A0A336LJL6   A0A336LNX1  

KEGG

101735970    no KO assigned | (RefSeq) SUN domain-containing ossification factor

GO

GO:0016021   GO:0016020   GO:0005737   GO:0034975   GO:0003968   GO:0003723   GO:0039694  

SignalP

Position:   1 - 20,         Likelihood:  0.964614

 

 

Length:

1046

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.558

Exp number, first 60 AAs:

1.42964

Total prob of N-in:

0.07368

outside

1  -  790

TMhelix

791  -  813

inside

814  -  1046

 

 

Pi

209.52881

Theta

203.560592

Tajima's D

0.0599

CLR

0.597447

CSRT

0.380930953452327

Interpretation

Uncertain