Gene

KWMTBOMO01669  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006108

Annotation

prolactin_regulatory_binding-element_protein_[Bombyx_mori]

Location

Bomo_Chr4(+):1209320-1216374      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.893

CDS

ATGTCTCCTCATAGGTCTGATGGATTATTAGCTAAAGTTGATTTTCCACTTTACACGCTCCAAACCTTAACAAATCGACATGTCATTGTTGCTGGAGGAGGAGGAGCATCGAACACAGGTGTCGCAAATGGATTTGAAATATTTGAACTGTCACATAATGGGAAGAGGTTTGTTGCTGAAGAGGTGATGCGCCATGAGACTGGTCCTAATGTCGTGATGACGTGTTCCGTAAGGAGCATCCAGAACCGGACGTACCTCACAGCGGGACAAGAGAGCCACTGTCAGCTGTACAAGGTGAACATCCGCATGGTGGATGCTGCTGAAATGAGACGAGGAAGTTTCCGGGCTGAGAATGGGCTTGTGAGGCGGAGGAGACGGACAGTCTCTGAAAATGATAATATATCAAAGAAAAACAATGTTAGTAACACAGAGAAAAGAATGTCATTTGAAATCAGACCTTGTGATAGTGTGCAGACTGACTTTAGTAATGATCCACTGCAGCGTGTTGTCAGGATTAGTAATAATGGGAAGTTGATGGCTACAGGTGGCATCGACACCAAGGTCAGAGTTTGGACCTTTCCAAAAATGGAACTCCTTTACGTACTGGAAAAGCATACTAAAGAGTTGGACGATCTAGACTTCAGTCCGTGCGATACGACGTTAGTGAGCATCGGGAAGGACGGTCTCGCCTGCCTGTGGTCCACTGCGGGCCTGCGCCCCCCGCTCCTCACCCTCACGTGCCAGCCACCTAACGGGAACAAGTACCTCTTCAGACGTTGCAGGTTCGGGCCCAACGAAGACAAGGAAGACGCGCACAGAATGTTCACGATAGCGAACCCGCTGAGTCGCTCCGGCAAACAGAAAGGTCTGCTGCAGCTCTGGGACCCCAAGGACGGCTCGCTGCGGAAGACGGTGCTGGTGAACGAGTCTCTGTCGGCGCTGACCGTCCGGGACGACGGCCGCTTCGTGGGCGTCGGGACCATGTTCAGTGGCTCCGTCGACATTTACATCGCCTTCAGTTTGCAGCGCGTGCTGCACGTGAGGAGCGCGCACCGGATGTTCGTGACGGGCGTGCAGTTCCTGCCGGTGCGCGGGTACGGGCCCGCCGTGGCCAGCCGCAGCGAGGCCGCGCTGCTCAGCATCTCCGTCGACAACTGCCTCTGCGTGCACAGCCTGCCCTACCGCGGCTCCGTGCCCATCTGGATCGCCATCGTTCTCATCATCTTCGTACTATTCTGTACGTTCAGTCTATGTTCATATTTAGGTATTTAA

Protein

MSPHRSDGLLAKVDFPLYTLQTLTNRHVIVAGGGGASNTGVANGFEIFELSHNGKRFVAEEVMRHETGPNVVMTCSVRSIQNRTYLTAGQESHCQLYKVNIRMVDAAEMRRGSFRAENGLVRRRRRTVSENDNISKKNNVSNTEKRMSFEIRPCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKHTKELDDLDFSPCDTTLVSIGKDGLACLWSTAGLRPPLLTLTCQPPNGNKYLFRRCRFGPNEDKEDAHRMFTIANPLSRSGKQKGLLQLWDPKDGSLRKTVLVNESLSALTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRGYGPAVASRSEAALLSISVDNCLCVHSLPYRGSVPIWIAIVLIIFVLFCTFSLCSYLGI

Uniprot

H9J9B6   Q1HQ78   A0A2W1BGI8   A0A2A4IZ04   A0A2H1VXU2   S4PKN2   + More
A0A212EWJ1   A0A0L7KZ05   A0A1L8DVU4   A0A0K8TTU7   A0A1B0D0S7   B0WE33   A0A1Q3F4K2   A0A182JN74   A0A084WG22   A0A182K7U2   A0A182MR26   A0A182HRE2   A0A182NAV9   A0A2M4BN61   Q7Q168   A0A182V0D8   A0A182KYZ7   A0A182UFT3   A0A2J7QAZ4   A0A182PG50   A0A0K8VSB4   A0A182SHZ7   A0A182XHT4   A0A182Y6E5   A0A182F4Q4   W5J6Y9   W8C8M4   A0A182RRB9   A0A182W8X1   Q16KX6   A0A034W887   A0A182QV26   A0A1Y1KNU1   A0A0A1WNB4   A0A336MKY6   U5EWI6   A0A1I8MZN2   B3N5F9   B4I1R8   B4Q4J0   A0A336N041   A0A1I8QAQ8   A0A1W4VAT6   B4KL84   B4P0P0   Q9VMH4   Q95SQ7   B3MKH8   Q29PP5   A0A3B0KM02   B4LRM8   A0A2M4AN82   B4G6H9   B4JB00   A0A0L0BW54   A0A0M5J8U9   A0A0M4ENX0   A0A1J1IH73   A0A1B6E7Q3   A0A182HC93   A0A069DYZ2   B4MUW1   A0A0V0G349   A0A224XNX5   A0A067RJH6   A0A1A9V1A3   A0A1W4WWP5   A0A1B0A875   A0A1B0BLT1   A0A1A9Y7J3   A0A1B0G0U4   A0A2J7QB04   N6TDI8   R4FNS0   A0A0P4VU66   A0A310SU50   A0A0L7QVM4   A0A0A9Y3A6   D6WP28   A0A2A3ENR3   A0A026WU94   A0A1B6LG88   A0A1B6DQD1   A0A088A1C2   F4WJM3   A0A170Z2L7   A0A0J7NUD4   A0A2P8ZJR5   A0A158NNC0   A0A195FY01   A0A0N0U4Q0   A0A195E4K8  

Pubmed

19121390    28756777    23622113    22118469    26227816    26369729    + More
24438588    12364791    14747013    17210077    20966253    25244985    20920257    23761445    24495485    17510324    25348373    28004739    25830018    25315136    17994087    22936249    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    26108605    26483478    26334808    24845553    23537049    27129103    25401762    26823975    18362917    19820115    24508170    30249741    21719571    29403074    21347285   

EMBL

BABH01004424    DQ443174    ABF51263.1    KZ150155    PZC72794.1    NWSH01004520    + More
PCG64991.1    ODYU01005101    SOQ45643.1    GAIX01004400    JAA88160.1    AGBW02011959    OWR45868.1    JTDY01004323    KOB68296.1    GFDF01003523    JAV10561.1    GDAI01000035    JAI17568.1    AJVK01021645    DS231904    EDS45209.1    GFDL01012596    JAV22449.1    ATLV01023433    KE525343    KFB49166.1    AXCM01005445    APCN01001695    GGFJ01005376    MBW54517.1    AAAB01008980    EAA14036.3    NEVH01016304    PNF25753.1    GDHF01016458    GDHF01010834    GDHF01009540    GDHF01004598    JAI35856.1    JAI41480.1    JAI42774.1    JAI47716.1    ADMH02001962    ETN60222.1    GAMC01002909    JAC03647.1    CH477933    EAT34957.1    GAKP01008961    GAKP01008960    GAKP01008959    JAC49993.1    AXCN02000654    GEZM01080460    JAV62131.1    GBXI01014394    JAC99897.1    UFQT01001122    SSX29027.1    GANO01000552    JAB59319.1    CH954177    EDV59038.1    CH480820    EDW54475.1    CM000361    CM002910    EDX03917.1    KMY88466.1    UFQT01003842    SSX35305.1    CH933807    EDW11745.1    CM000157    EDW87935.1    AE014134    BT044528    AAF52344.1    ACH95302.1    AY060647    AAL28195.1    CH902620    EDV31531.1    CH379058    EAL34247.1    OUUW01000010    SPP86121.1    CH940649    EDW63623.1    GGFK01008910    MBW42231.1    CH479180    EDW28204.1    CH916368    EDW02870.1    JRES01001249    KNC24246.1    CP012523    ALC38368.1    ALC38182.1    CVRI01000047    CRK97785.1    GEDC01003327    JAS33971.1    JXUM01126916    JXUM01126917    JXUM01126918    KQ567125    KXJ69610.1    GBGD01001545    JAC87344.1    CH963857    EDW76306.1    GECL01003599    JAP02525.1    GFTR01006154    JAW10272.1    KK852432    KDR23972.1    JXJN01016549    CCAG010006198    PNF25754.1    APGK01006704    APGK01034104    KB740904    KB736898    KB632006    ENN78434.1    ENN83113.1    ERL87945.1    ACPB03022604    GAHY01000468    JAA77042.1    GDKW01000388    JAI56207.1    KQ760343    OAD60859.1    KQ414725    KOC62665.1    GBHO01016970    GBRD01001301    GDHC01016797    GDHC01001501    JAG26634.1    JAG64520.1    JAQ01832.1    JAQ17128.1    KQ971343    EFA04425.1    KZ288215    PBC32769.1    KK107109    QOIP01000008    EZA59226.1    RLU19695.1    GEBQ01017339    JAT22638.1    GEDC01009403    JAS27895.1    GL888186    EGI65515.1    GEMB01002673    JAS00520.1    LBMM01001611    KMQ96015.1    PYGN01000035    PSN56741.1    ADTU01021228    KQ981208    KYN44714.1    KQ435803    KOX73144.1    KQ979685    KYN19837.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000037510    UP000092462    UP000002320    + More
UP000075880    UP000030765    UP000075881    UP000075883    UP000075840    UP000075884    UP000007062    UP000075903    UP000075882    UP000075902    UP000235965    UP000075885    UP000075901    UP000076407    UP000076408    UP000069272    UP000000673    UP000075900    UP000075920    UP000008820    UP000075886    UP000095301    UP000008711    UP000001292    UP000000304    UP000095300    UP000192221    UP000009192    UP000002282    UP000000803    UP000007801    UP000001819    UP000268350    UP000008792    UP000008744    UP000001070    UP000037069    UP000092553    UP000183832    UP000069940    UP000249989    UP000007798    UP000027135    UP000078200    UP000192223    UP000092445    UP000092460    UP000092443    UP000092444    UP000019118    UP000030742    UP000015103    UP000053825    UP000007266    UP000242457    UP000053097    UP000279307    UP000005203    UP000007755    UP000036403    UP000245037    UP000005205    UP000078541    UP000053105    UP000078492   

PRIDE

H9J9B6    Q1HQ78    Q9VMH4    Q95SQ7   

Pfam

PF00400   WD40        + More
PF12894   ANAPC4_WD40

Interpro

IPR017986   WD40_repeat_dom        + More
IPR001680   WD40_repeat       
IPR036322   WD40_repeat_dom_sf       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR019775   WD40_repeat_CS       
IPR011045   N2O_reductase_N       
IPR024977   Apc4_WD40_dom       

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998       
SSF50974   SSF50974       

ProteinModelPortal

H9J9B6   Q1HQ78   A0A2W1BGI8   A0A2A4IZ04   A0A2H1VXU2   S4PKN2   + More
A0A212EWJ1   A0A0L7KZ05   A0A1L8DVU4   A0A0K8TTU7   A0A1B0D0S7   B0WE33   A0A1Q3F4K2   A0A182JN74   A0A084WG22   A0A182K7U2   A0A182MR26   A0A182HRE2   A0A182NAV9   A0A2M4BN61   Q7Q168   A0A182V0D8   A0A182KYZ7   A0A182UFT3   A0A2J7QAZ4   A0A182PG50   A0A0K8VSB4   A0A182SHZ7   A0A182XHT4   A0A182Y6E5   A0A182F4Q4   W5J6Y9   W8C8M4   A0A182RRB9   A0A182W8X1   Q16KX6   A0A034W887   A0A182QV26   A0A1Y1KNU1   A0A0A1WNB4   A0A336MKY6   U5EWI6   A0A1I8MZN2   B3N5F9   B4I1R8   B4Q4J0   A0A336N041   A0A1I8QAQ8   A0A1W4VAT6   B4KL84   B4P0P0   Q9VMH4   Q95SQ7   B3MKH8   Q29PP5   A0A3B0KM02   B4LRM8   A0A2M4AN82   B4G6H9   B4JB00   A0A0L0BW54   A0A0M5J8U9   A0A0M4ENX0   A0A1J1IH73   A0A1B6E7Q3   A0A182HC93   A0A069DYZ2   B4MUW1   A0A0V0G349   A0A224XNX5   A0A067RJH6   A0A1A9V1A3   A0A1W4WWP5   A0A1B0A875   A0A1B0BLT1   A0A1A9Y7J3   A0A1B0G0U4   A0A2J7QB04   N6TDI8   R4FNS0   A0A0P4VU66   A0A310SU50   A0A0L7QVM4   A0A0A9Y3A6   D6WP28   A0A2A3ENR3   A0A026WU94   A0A1B6LG88   A0A1B6DQD1   A0A088A1C2   F4WJM3   A0A170Z2L7   A0A0J7NUD4   A0A2P8ZJR5   A0A158NNC0   A0A195FY01   A0A0N0U4Q0   A0A195E4K8  

PDB

5TF2     E-value=7.50131e-49,     Score=490

KEGG

732901    K14003 prolactin regulatory element-binding protein | (RefSeq) prolactin regulatory binding-element

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0051020   GO:0003400   GO:0005090   GO:0005096   GO:0009306   GO:0030176   GO:0000902   GO:0005783   GO:0012505   GO:0005515   GO:0046856   GO:0005488   GO:0043154   GO:0006508   GO:0006811   GO:0016020   GO:0003779  

Length:

423

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

24.68873

Exp number, first 60 AAs:

0.13569

Total prob of N-in:

0.03680

outside

1  -  399

TMhelix

400  -  422

inside

423  -  423

 

 

Pi

202.72022

Theta

178.876053

Tajima's D

-0.807471

CLR

0.88249

CSRT

0.179391030448478

Interpretation

Uncertain