SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01667
Pre Gene Modal
BGIBMGA006041
Annotation
PREDICTED:_type_II_inositol_1?4?5-trisphosphate_5-phosphatase_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.299
 

Sequence

CDS
ATGAACCAGGACGATATAAAATCTGTTGTACAGGAAAAGTTTCTGTCTAGTGAACGAGTTACGGCGTTCCTGAGCGATGCTAAAGTACTTTATCCTGAAAGGGTAATGAAAGACAGACTGTTGGCGATTGTTGAATTTGGAGATGAAAAAGCTGTTTTTTGTTTATTTACATCATGTTACCCACCGAAATCCTTCACGGATTTATCCATAGAAATAGTTTTGCCCATCGACAATAGTTTCAAATGTGAAATCGACAACAAACCGACTGATCCCGAAGCAGTATTGTACCTGAACCTTCAATCTCGCAACAGTAAGTTCAAATTCGAAATACAAATAACTCCACGAGTTGACAATTTTGTTGATGATCTGTTCAGAGGTATAGATGCAGTGAACAAAGTCCCCACACAACCAGAATTTGTATGGTTAAAAAAATATAAAGGAAAGAGTGAAGAGGATATATTTGCTCATACCATGGTTGTAGAAAGGTCTGGAGTAGCCCATACTCAAAGCTCGGCTCCTGTTGCATTCAGAGAAAGCCTAATAAAGCATAAAATGGCAGACAAAGAGATGGAATATACATTTTGCAAAAGATTTACAATTTTTTGTGGTACATGGAATGTCAATGATAAACCTCCAGTTATTCCTCTCAAAGAGTGGCTTAATGTAGACAAAGAGCCCCCTGATATTTATGCTGTTGGATTTCAAGAATTAGATTTGTCAAAAGAGACTTTTCTCTTTGACCAGACTGTTAGAGAAGATGAGTGGTACCATGCTGTGCTGAACTATGTTGACCCTCGAGCTAAATATGTAAAGTTGGAAAAAGTGAGACTGGTTGGAATGATGCTAATAGTTCTAATAAAAGCCAAACATGTGTCTCATGTGAGTAATGTCATCTGTGATACTGTAGGCACTGGGATAATGGGGAAAATGGGCAACAAAGGAGGAGTATCCATAAGGTTTGATATTCACAATACTTCTATATGTTTTGTGAACTCTCATCTTGCAGCCCATGTTGAAGAATATGAGAGGAGGAATCAAGATTTTCGAGATATATGTAATAGAACAAGATTTGCACAACCAAATCAACTGCCTAAAACAATAAAAGACCATGACCATATTTATTGGTTAGGTGACCTGAACTATAGGATTACAGAACTGGATCCTAGTACTGTCAAGCGAATGGTTAGTGAACATAATTTTGGACCAGTACTAGAGTGGGATCAGTTAAAACAGCAACATAAAATAGATAATGTATTTTCTGGATACCTTGAGGGTCCTATTAACTTTAAGCCTACTTACAAATATGATCCTGGTACAGACAATTGGGATTCCAGTGAGAAAAACAGAGCCCCTGCATGGTGTGACAGGATATTCTGGAAAGGAAAGGAAATTACACAGTTGGCGTACAGAAGTCATCCTTCTCTTAATATTAGTGACCACAAACCAGTCTCGGCTGTTTTTAGTTCGTACATTAAAATAATAGATGAGGAAAAGTACAGAAAAGTCTATGAAGAAGTAATTAAACACTTAGACAAAATGGAAAATGAATTGATACCACAAGTAAAAGTTGACAGAACTGAAATTGATTTTGGTACAGTTAGGTACCTTGAACTGCAAGTTCAAACCATCACTATAAGGAATACTGGTAAACTACCTGTAGAATTTGAATTCATAAAGAAATTGGATGATACAAGTTTCTGTAAAGAGTGGCTCATAGTAGAACCCTACAAAAAAAGTATATGTGCTGATGAAGTTTGCGAGATTCATCTGAAAGTACTCATAAATAAGACTTCAGCTTGCAAAATGAATGCTGGTACAGACAAACTCTATGATATCCTTGTGCTCCATCTTTATGGAGGCAAAGATATTTTCATAACTGTAAATGGAACATACCAGAGGAGCTGTTTTGGATGCTCCATAGAAGTGCTAGTGAACTTGAATGTGCCAATCAAAGAAGTAGCTGTTGGCAAACTGATTGAATTAGAGAATAAGAGAGATCAAACTGTATCACAACAGTCCACATATTCTATACCAAAGGAAATTTGGTTCTTGGTAGACCATATTTACTTACATGGCCTTAAAGAGCCCAATTTGTTTGAGCAACCTGGCTTACACTCTGAAATTTTGCAAATTAGAGATTGGTTAGACAGCGGCTCTATAGATCCTATCCCTGGGAGCATTCACTCAGTAGCTGAAGCCCTCTTACTTTTGCTAGAGAGTACAGTAGATCCAATTATTCCATATAATCTTCAATCGGTGTGTCTGAGAGCTTCAGCAAATTATCTTCAATGCAAACAGATTGTCATGGAATTGCCTGAATTCAGGAAGAATGTCTTTTTGTACTTATGTGAGTTCTTGCAGGAAGCTTTGCAGCATAGTGCAGAAAATGGCTTGGATGCGAAAACTTTATCAACACTGTTTGGTTCTATATTTTTACGTGACAATCCAAATAATAGTCACGAGCCTCAGACAAGAATAAATAAACAAGTCGTTGACAAGAAAAAGGCCCAATTTGTTTACCATTTCTTAATAAATGATCATAGTGATCTGATATTCTCAAGATAA
Protein
MNQDDIKSVVQEKFLSSERVTAFLSDAKVLYPERVMKDRLLAIVEFGDEKAVFCLFTSCYPPKSFTDLSIEIVLPIDNSFKCEIDNKPTDPEAVLYLNLQSRNSKFKFEIQITPRVDNFVDDLFRGIDAVNKVPTQPEFVWLKKYKGKSEEDIFAHTMVVERSGVAHTQSSAPVAFRESLIKHKMADKEMEYTFCKRFTIFCGTWNVNDKPPVIPLKEWLNVDKEPPDIYAVGFQELDLSKETFLFDQTVREDEWYHAVLNYVDPRAKYVKLEKVRLVGMMLIVLIKAKHVSHVSNVICDTVGTGIMGKMGNKGGVSIRFDIHNTSICFVNSHLAAHVEEYERRNQDFRDICNRTRFAQPNQLPKTIKDHDHIYWLGDLNYRITELDPSTVKRMVSEHNFGPVLEWDQLKQQHKIDNVFSGYLEGPINFKPTYKYDPGTDNWDSSEKNRAPAWCDRIFWKGKEITQLAYRSHPSLNISDHKPVSAVFSSYIKIIDEEKYRKVYEEVIKHLDKMENELIPQVKVDRTEIDFGTVRYLELQVQTITIRNTGKLPVEFEFIKKLDDTSFCKEWLIVEPYKKSICADEVCEIHLKVLINKTSACKMNAGTDKLYDILVLHLYGGKDIFITVNGTYQRSCFGCSIEVLVNLNVPIKEVAVGKLIELENKRDQTVSQQSTYSIPKEIWFLVDHIYLHGLKEPNLFEQPGLHSEILQIRDWLDSGSIDPIPGSIHSVAEALLLLLESTVDPIIPYNLQSVCLRASANYLQCKQIVMELPEFRKNVFLYLCEFLQEALQHSAENGLDAKTLSTLFGSIFLRDNPNNSHEPQTRINKQVVDKKKAQFVYHFLINDHSDLIFSR

Summary

EMBL
BABH01004422    ODYU01005101    SOQ45641.1    KZ150155    PZC72792.1    NWSH01004520    + More
PCG64993.1    KQ459584    KPI98503.1    KQ460644    KPJ13252.1    AGBW02009291    OWR51175.1    JTDY01004323    KOB68294.1    NEVH01013198    PNF30047.1    GEDC01023561    GEDC01018764    GEDC01010327    GEDC01007075    JAS13737.1    JAS18534.1    JAS26971.1    JAS30223.1    KK852971    KDR13092.1    GEBQ01014419    JAT25558.1    GBYB01002686    JAG72453.1    GGMS01002470    MBY71673.1    ADTU01002890    KQ434787    KZC05289.1    NNAY01001176    OXU24861.1    GFXV01005603    MBW17408.1    GGMR01010056    MBY22675.1    ABLF02022662    KQ414679    KOC64064.1    KQ435774    KOX75106.1    QOIP01000012    RLU16175.1    KK107261    EZA53934.1    GEDC01020868    GEDC01000133    JAS16430.1    JAS37165.1    GL435343    EFN73438.1    KZ288186    PBC34838.1    PBC34837.1    DS235184    EEB13064.1    KQ981215    KYN44514.1    GBYB01002685    JAG72452.1    GL451202    EFN79762.1    GDKW01000467    JAI56128.1    GBGD01000418    JAC88471.1    GBBI01002944    JAC15768.1    GECL01000990    JAP05134.1    GL888237    EGI64245.1    GFTR01008118    JAW08308.1    KQ976892    KYN07227.1    KQ979074    KYN22786.1    KQ976565    KYM80538.1    KQ982316    KYQ57843.1    GBHO01025786    GBHO01025785    GBRD01015248    JAG17818.1    JAG17819.1    JAG50578.1    GDRN01101598    JAI58346.1    GEBQ01007500    JAT32477.1    JH431584    GDHC01008644    JAQ09985.1    GEZM01088662    JAV58033.1    GDIP01134637    GDIQ01029610    JAL69077.1    JAN65127.1    MWRG01023261    PRD22024.1    GDIQ01051910    JAN42827.1    GGLE01001949    MBY06075.1    LRGB01002451    KZS07616.1    GL732535    EFX84231.1    GDIP01223211    JAJ00191.1    KK116685    KFM68462.1    GFWV01018729    MAA43457.1    PNF30048.1    KQ971371    EFA09929.2    HACA01012976    CDW30337.1    CAEY01001958    PZQS01000006    PVD29007.1    GFWV01013639    MAA38368.1    AGTP01008335    AGTP01008336    AGTP01008337    GBIH01001489    JAC93221.1    AQIA01004663    AQIA01004664    AQIA01004665    AQIA01004666    AQIA01004667    AQIA01004668    AQIA01004669    KB321069    ELW48211.1    AEYP01007706    AEYP01007707    AEYP01007708    AEFK01124433    AEFK01124434    AEFK01124435    AEFK01124436    AEFK01124437    AEFK01124438    GFFW01000441    JAV44347.1    LJIJ01000200    ODN00527.1    GGMS01007602    MBY76805.1    KB744367    EOA95181.1    AKHW03003146    KYO35614.1    GEFH01004124    JAP64457.1    GACK01001000    JAA64034.1    AAEX03009590    AAEX03009591    AAEX03009592    AAEX03009593    BC098852    AAH98852.1    AC142187    GFPF01010571    MAA21717.1    GEDV01008135    JAP80422.1    GFAC01005343    JAT93845.1    AGCU01160213    AGCU01160214    AGCU01160215    JSUE03001127    JSUE03001128    JSUE03001129    JSUE03001130    JSUE03001131    JSUE03001132   
Pfam
PF03372   Exo_endo_phos        + More
PF16776   INPP5B_PH
PF00620   RhoGAP
PF16186   Arm_3
PF00514   Arm
Interpro
IPR000198   RhoGAP_dom        + More
IPR008936   Rho_GTPase_activation_prot       
IPR005135   Endo/exonuclease/phosphatase       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR031896   INPP5B_PH_dom       
IPR037793   OCRL1/INPP5B_INPP5c       
IPR000300   IPPc       
IPR013783   Ig-like_fold       
IPR011989   ARM-like       
IPR000225   Armadillo       
IPR032413   Arm_3       
IPR016024   ARM-type_fold       
SUPFAM
SSF56219   SSF56219        + More
SSF48350   SSF48350       
SSF48371   SSF48371       
Gene 3D
PDB
4CMN     E-value=3.59359e-106,     Score=987

Ontologies

Topology

Length:
854
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01427
Exp number, first 60 AAs:
0.00241
Total prob of N-in:
0.00067
outside
1  -  854
 
 

Population Genetic Test Statistics

Pi
151.543895
Theta
185.297671
Tajima's D
-0.494547
CLR
3.922951
CSRT
0.24238788060597
Interpretation
Uncertain
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