Silkworm Genome Informatics Database

Gene

KWMTBOMO01660 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003929

Annotation

PREDICTED:_enhancer_of_mRNA-decapping_protein_4-like_[Bombyx_mori]

Location

Bomo_Chr4(+):1088420-1108784 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.017 Cytoskeletal Reliability : 1.304 Mitochondrial Reliability : 1.068 Nuclear Reliability : 1.216

CDS

ATGAGTTTATCTAAATATCAAAACCTTAAGAAATCAAAATCGCTGTGCTCATTGCAAAACGATGGTAATAATGAAAGGCTCCGCGTGCATCGCACTAGCGAATCTTCTGTAGAATTGTACGTTATGATGTCTGACTCTGATGACGCGGTGGAGGAAGGTAAGGAGGACAGTGGCTTCGAAGAAAAAGTGATCAATGGAGAGATACTGTCTTGCTTGGAACAGAAAATCGATAGGCTTAGTGATATGTTCCTAGAGCAGTGCAGATTGTTGACCACCCTTAAGGAAGAAATACGCAACTCCAAAGCCACAATTAAGAAAGCAGAGAATGCCCACAACCAGGTCTTCTCTGAACTAATGAAGAATGTTTTTTCACAAAGAATTAAAGATCTAGACAAAGCAGATGCTTCCAGCATGAAAGACCAATCAATCAACGTTCGCGCCAAAACTTTACTGGATGCTATTGAATCTAAGCGCGGGATCTCCATGGACCGGGAAATCAGCAATGCTCTAGTCAACTTCTTGCAGAGCGAGGAGTTAAAAGAACAGATGGTACGAGCCACGGCCGAATCAGTGAAGGAAGTGATCGGGAGTTGCGTCTCAAGTGACTGTTCAACTTTATACCTGCCTGTGTTGGAACGCTCGCATCGGCGTCTTGTGCGGCACATCACCAAAGTCATCGAGGAAGCTTTTATTGAATTGGAAGAAAACTCGGCTTCCCTATCGAAATCCGTGTATAAGACGTCAAAAGTTTTGCGTCGTGCTTTGGAACGACACCAATCTATAGTGGAAGCCGCCAGTGATCCTGAGAAGAATCTCATCAGCACACTCCAATGCTCCGTCGAAGAATTTCTCCACAAAGAACTAAAACAATGGCGTCAGAAAGTTCTAGATATGTTCAATGCGCAAATTCTTCCGACAGATGATATCGTTGAGCTAGCGACGCCCGAGGACTATGTTAATAAAGTCACAAGTCCGCCGCAACCAGCTGATCCAGAACACTCAATTATAGACCAATTGATGAAGTCAGCCGAGATTAAGAAACAGATGAATGACGGAGATGTGAACGGTTCGTTTGAGCGCGCGCTCTCTGCTGCCGACTTGTCGCTAGTGATGGCGGCATGTCGCGCCGCGGAGCCGCTGCACGTGTTCACGCCCCCGTGCCAGTTGCGGCAGCCAGTTCTATTGTCGCTTGTCCAACAACTTGCCACTGATATGGTACACGACACAATTCTCAAATGCAGGTACATTGAAGATGCAATAACGAATTTGAACACGGCTCACCCTGACACCCGAGCATACCTCCCCCTGGTCGTAGGAGAAGTTCGCAGACATCTCACGAAGTTCCTTTCTTCATTTCCAAACCATGTTGCAAGCCGCAGAATGGCCTACAGATGTGTTTTAATTATTCTTCTGTTTAATAATTTGTATTTCTCGTCGGCCGCCGCACACGGACATAGTGTTGATAACTTGGAGCGCGAATCTGACGGCAGCTACCGGTCCAGGGACCACGAGCACTATGGAGACTCTGGGCACAACACGGAATTTGATCACGAAGCCATTTTAGGCAGCGTGAAGGAGAGCGAGGAGTTTGATCGTCTGAGCCCTGAGGAGGCAAAGCGGCGCCTGGCTCTAATGCTACCCAAGATGGATCTCAACAACGATCAGAACATTGACCGAATTGAACTTAAGAAATGGATTCTAAACTCTTTTGTGAAGCTATCCAGAGAAGAGGCAGAAGAACGTATGTCAGAAGCGGACGAGAACCGCGACGGGTCTGTGACTTGGTCCGAGTACCTGCAAGACGCGTTCGGAGTGGACACCGAGGAGGAGGTCGGACCAGAAGACACGGGAGACTCTGGCATGCTGTTACAAGAAGAGAAAGCGATGTGGTCGGTCGCCGATAAGAACGGCGACGGGAAATTGAATCTTGATGAATTTGAGGTGTTCACGAATCCGGAGGAGCACTCCGAGATGCACGAGTTCCTGGTGCAGCAGGCTCTGCGGGAGAAGGACGCCAACCGCGACGGCAGCGTCGACTTCAGCGAGTTCATCGGCGACAGAGGCTCGCAGCAAGACAAGGCGTGGGTGGTGGCCGAAAAGGACAAGTTCGACCACGAGCTGGACCTCAACGGGGATGGGACGCTGGACGCGGCGGAGGTCCGCGCCTGGGTCATCCCTGACAACGAGGAAATAGCTGACGAGGAAGTGGAGCACTTGTTCGCGTCGGCCGACGACGACCACGACAACGTGCTGTCGTTCGAGGAGGTGCTGCGGCACCACGACGTGTTCGTGGGCAGCGAGGCGTCGGACGCCGCGCGCGACCTGCTCGGGGAACACTTCGACGACGAGCTGTGA

Protein

MSLSKYQNLKKSKSLCSLQNDGNNERLRVHRTSESSVELYVMMSDSDDAVEEGKEDSGFEEKVINGEILSCLEQKIDRLSDMFLEQCRLLTTLKEEIRNSKATIKKAENAHNQVFSELMKNVFSQRIKDLDKADASSMKDQSINVRAKTLLDAIESKRGISMDREISNALVNFLQSEELKEQMVRATAESVKEVIGSCVSSDCSTLYLPVLERSHRRLVRHITKVIEEAFIELEENSASLSKSVYKTSKVLRRALERHQSIVEAASDPEKNLISTLQCSVEEFLHKELKQWRQKVLDMFNAQILPTDDIVELATPEDYVNKVTSPPQPADPEHSIIDQLMKSAEIKKQMNDGDVNGSFERALSAADLSLVMAACRAAEPLHVFTPPCQLRQPVLLSLVQQLATDMVHDTILKCRYIEDAITNLNTAHPDTRAYLPLVVGEVRRHLTKFLSSFPNHVASRRMAYRCVLIILLFNNLYFSSAAAHGHSVDNLERESDGSYRSRDHEHYGDSGHNTEFDHEAILGSVKESEEFDRLSPEEAKRRLALMLPKMDLNNDQNIDRIELKKWILNSFVKLSREEAEERMSEADENRDGSVTWSEYLQDAFGVDTEEEVGPEDTGDSGMLLQEEKAMWSVADKNGDGKLNLDEFEVFTNPEEHSEMHEFLVQQALREKDANRDGSVDFSEFIGDRGSQQDKAWVVAEKDKFDHELDLNGDGTLDAAEVRAWVIPDNEEIADEEVEHLFASADDDHDNVLSFEEVLRHHDVFVGSEASDAARDLLGEHFDDEL

Uniprot

NA

ProteinModelPortal

NA

PDB

2VXG E-value=1.43932e-13, Score=188

KEGG

105842639 no KO assigned | (RefSeq) enhancer of mRNA-decapping protein 4-like

GO

GO:0005509 GO:0019079 GO:0043066 GO:0043154 GO:0006508 GO:0006811 GO:0016020 GO:0005515 GO:0003779 GO:0016021

Length:

784

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.16968

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00701

outside

1 - 784

Pi

288.558997

Theta

188.268135

Tajima's D

1.566255

CLR

0.350122

CSRT

0.794960251987401

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
26280517	DAMFAGQK	100.00	2e-04
26822097	IVHIIAEEIK	100.00	0.002
26280517	GYHFGVFK	100.00	0.002

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics