Gene

KWMTBOMO01659  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006103

Annotation

PREDICTED:_enhancer_of_mRNA-decapping_protein_4-like?_partial_[Bombyx_mori]

Location

Bomo_Chr4(+):1065050-1083973      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.747

CDS

ATGAAAGTGACATTTCTACTAAGGAATTCATGTGGAAAACTGAAAAATAGACGTAAAATGCAACCACCAACCATGTTACCTAAGCTTTCAGATACAACTCAGACGATAGCATTTGCTGAAGGAGATGGTATGAGCTGTATAGAAGTTTACTCTTCGGATGTGGTCGTGACTATCAACACCGGTAACCATGATCATGGTAGCTCAAAAGTGAAGTTGAAGAATCTTGTAGATTATAACTGGGAGCCCAAGTTTTATCCTGGGCAGCTTCTAGCCATTCACATCAGTGGAAAGTACCTGGCATACTCTATTAAAGCTCCTAATACAGCTAACCCAGGTACTTGCAGTGGTATGGTTAGAGTTGTGTACAACCTTGAACCAGGAACTGATCGTCGTGCTCTCATCAAGGGAATGAAGGGGGAGGTCCAAGACTTATCATTTGCCCATATTCAAAACGAGATAGTATTGGCTTGCATCGATGAACAGGGCAACTTTTATGTTCATGAGATTGAAGCAACTGACAGTGGACTGAGATGTACACTAATCGCTGAGATTCGTGAAGATACAGGTATTGTGGGATCATTCCACAGAGTTGTGTGGTGCCCTTATATACCCGATGAAGAAGACGATGACCCTGATGAAGATGTGGATAGACTTCTGCTGACGACTCATGCTAATACTGCCCGCATCTGGAACATGCGCGTGATCGCGAGGGCCGTGGCGGGCACGGAGGGGGTGGGGGGCGCGGGTGCGCTGGCGGGCGGCGCGGGCACGCTGTCCGCGGGCGGGCACGCCGCCGACCTGGTGGACGCCGCCTTCTCGCCCGACGGCACCGCGCTCGCCACCGCCGCCGCCGACGGATACGTCATGTTCTTTCAGGTGTGCATGCAGAACCGGAGCCCCCGCTGCCTGCACAAGTGGCAGCCGCACGACGGGAAGCCCCTCAGCTGTCTCTTCTTCCTCGACAACCACAACAACTACAACTCTGATGTTCAGTTCTGGAAGTTTGCCGTGACCGGCGCGGACAACAACACCTGCATCAAGATATGGTCGTGCAAGTCCTGGAACTGCCTGCAGACCATCTCGTTCGCTCCTGAAGTGCCCAACGAGAGCAGTCTCGGTTTGAAGGTGATGCTGGACAGGAGCGCGCGGTTCCTGGTGGTGTCAGCGGCGAGCGGCCGCGCGCTGTACGTGCTGGGCGTGGCGCGCGACGCGGCCGACACGCACGCACACTGCACCGCGCTCGCGCACTTCCTGCTGCCCTTCCCCGTGCTCAGCTTCTGCATCGCCGACGCGGAAGAACAGACCGCGAAGTGCGAGTCCAGCTGCTCCGACCCGTTCCACCGCAGCGAGTCCGCCGACCCCGCCGGGCCCTCGCCCGACGACTTCGACCTCCAGCCGGACGTGGCGGACTCGGGCTCGGAGTGCGGGTGCGTCGGGCGGGCCGCCTTGCGCCTCTACGTGGTGCAGCCCAAGGGCCTGCAGGAAGGGCGGCTGGCCTTCGCACTGCCTGCAGGCGGCGCGCCCGAGGAGCAGGGCGGCGAGGCCGGGCCGGCGGCCGTGCCCTCCAGCATCCTGCAGCAGCAGAGCCAGCAACTCAAGAACCTGCTCATGAGGTCACAGACGCAGCCCGGGAGCCTCATCGGTCAGAGGGCGGAGTCTCCGCCGATCCCTCCGCAGCTCAACCTCATGACGCCCGACGCGTTCAGCTCGCCGGGCAAGAGGGAGGAAGAGGATCCGCCGCTGTCGGCCACGCCTGACGTCAGCGCCAAGCCGCGCGGCTCCGTCGGAGGGGACGCCGACCGCGCCAAGGGAGCCGAGGGCGCGGGCAAGCCCACCTCGGGGGGGTCCAGTCCCAGCCGGGAGGTGCAGGAGATCATGGCGCACAATGACGACGCCTTCTTCGCCGACAACCTGTGTAGTGTGGGAGCCGCCGACGTCACCAGTTGTTCCGTTACAGACGGCGACACCTCGTGGCCGCAGATATCCATAGCGCAGATAACGGAAGCGAACCAACGCAAGGCGTCCAGCGACAAGTCGGGCGCGCAGAGCCAGCCGCTCGGCGCCGCGTGCGACGCGCGACTCGACCTGCTCGAGCACAAACTGGACAAAATCACAGAGTTGCTGCAGCAGCAGGGTCGCGAGCTGCGGGCCCTGCGCGGCGCCACGTGGTGTCCGCGGACCGCACTGGACGAAGCGCTGCAGGCACACGCACAGGCCTTAGATAATGCTGTCACACTAGGGTGGGAGCGCATGTCGGCGGCGGGCGAGGCTGCGGGCGCGGCGGCGGGCGCGGGCGCGGCGCAGGCGGCGGGCGCGGGGGCGGCGCGCGCGCTGGAGCCGCTGGTGGCCGCGCTGCAGCACGAGCTCGCCGCCAAGCTCACCGCCACCGACCAGCTGCTCAGGGACAACATCGACAAACTAGTCAACAGCAAGGCGGTGTCGGAGCGGCTGAGCTCGTCCATAGCGCGCTGCGTGTCGGAGCAGGTCCGCGAGTCCTTCCGCGCGTCGGTGACGGACAGCCTGCTGCCCGCCATGGAGCGCGCGCACGCACAGATCTTCCGACAAGTCAACAACGCCTTCCAGAACGGGACTAAAGAGTTCGCAGCTCACACGGAGGCCGCAGCCCGCGCGGCGGCGGAGCGCGGCGGGGCGGCGGCCTGCACCGCGCTGCGGGCCGCGCTGGACCGGCACGCCGATACGCTGGCGCAGCACCCGCGCCTGCTGCTGCAGCACGCCACGCAGGCCGTGCGGGACGCGGCGCACAGCGTGCTGGAGAAGGAGCTGCTGTGGTGGCGCGAGCAGGCCCGCTCGGCGTCGCTGACGTCACGCGCGCACTCGCCGCACACGCCGCACGCGCACAACCCGCTCGACCGACAGATGCAAATATCTCAAGTGCAAAACATGATCTCATCGGGTGACGTGAACGGCGCCTTCCAGCTGGCCTTGTCCGCCTCGGACCTGTCCCTCGTGGTCACAGCCTGCAGGTCGGCCGAGCCTTCACTGGTGTTCGGGCCCCCCTGTCAGCTCAAGCAGCACGTACTGCTATCATTAGTTCAGCAACTGGCCGCCGATATGTCCAAGGACACGCAGCTCAAGCACAGGTATCTAGAGGAAGCAGTAATGAACCTGGATACGTCTAGTCCTGTGACCCGTGAGCATCTGCCAGGAGTCGTAGCTGAACTGCAGCAGCAAGTGTCGGCCTTCGTGACCGCCTCGCCCTCGCACCCGCTGGCTCGCAGACTGCGCATGTTGCTGCTGGCCTCTGATGCTCTGCTCAAGGCCACGGTGTGA

Protein

MKVTFLLRNSCGKLKNRRKMQPPTMLPKLSDTTQTIAFAEGDGMSCIEVYSSDVVVTINTGNHDHGSSKVKLKNLVDYNWEPKFYPGQLLAIHISGKYLAYSIKAPNTANPGTCSGMVRVVYNLEPGTDRRALIKGMKGEVQDLSFAHIQNEIVLACIDEQGNFYVHEIEATDSGLRCTLIAEIREDTGIVGSFHRVVWCPYIPDEEDDDPDEDVDRLLLTTHANTARIWNMRVIARAVAGTEGVGGAGALAGGAGTLSAGGHAADLVDAAFSPDGTALATAAADGYVMFFQVCMQNRSPRCLHKWQPHDGKPLSCLFFLDNHNNYNSDVQFWKFAVTGADNNTCIKIWSCKSWNCLQTISFAPEVPNESSLGLKVMLDRSARFLVVSAASGRALYVLGVARDAADTHAHCTALAHFLLPFPVLSFCIADAEEQTAKCESSCSDPFHRSESADPAGPSPDDFDLQPDVADSGSECGCVGRAALRLYVVQPKGLQEGRLAFALPAGGAPEEQGGEAGPAAVPSSILQQQSQQLKNLLMRSQTQPGSLIGQRAESPPIPPQLNLMTPDAFSSPGKREEEDPPLSATPDVSAKPRGSVGGDADRAKGAEGAGKPTSGGSSPSREVQEIMAHNDDAFFADNLCSVGAADVTSCSVTDGDTSWPQISIAQITEANQRKASSDKSGAQSQPLGAACDARLDLLEHKLDKITELLQQQGRELRALRGATWCPRTALDEALQAHAQALDNAVTLGWERMSAAGEAAGAAAGAGAAQAAGAGAARALEPLVAALQHELAAKLTATDQLLRDNIDKLVNSKAVSERLSSSIARCVSEQVRESFRASVTDSLLPAMERAHAQIFRQVNNAFQNGTKEFAAHTEAAARAAAERGGAAACTALRAALDRHADTLAQHPRLLLQHATQAVRDAAHSVLEKELLWWREQARSASLTSRAHSPHTPHAHNPLDRQMQISQVQNMISSGDVNGAFQLALSASDLSLVVTACRSAEPSLVFGPPCQLKQHVLLSLVQQLAADMSKDTQLKHRYLEEAVMNLDTSSPVTREHLPGVVAELQQQVSAFVTASPSHPLARRLRMLLLASDALLKATV

Uniprot

A0A194PYS7   A0A2A4JUR8   A0A2J7QWF8   A0A0L7RC16   E2AXF8   A0A232EKD6   + More
A0A1B6MJB4   A0A1Y1L3Y4   A0A154PGB8   A0A310S8S1   F4WSF0   A0A151X3L7   E2BKU7   A0A195ERX8   A0A3L8DDI1   A0A158NTM2   A0A195BRA0   A0A0J7L5J4   A0A026VZ10   A0A023F8T6   A0A224XDY0   A0A069DWY6   A0A0V0G6F1   A0A1B6GNW8   A0A195EFV6   A0A1B6DK13   A0A195D453   A0A1B6EDS9   A0A1B6HFA4   A0A1B0D1F1  

Pubmed

26354079    20798317    28648823    28004739    21719571    30249741    + More
21347285    24508170    25474469    26334808   

EMBL

KQ459584    KPI98492.1    NWSH01000576    PCG75549.1    NEVH01009765    PNF32917.1    + More
KQ414617    KOC68379.1    GL443549    EFN61882.1    NNAY01003819    OXU18805.1    GEBQ01003951    JAT36026.1    GEZM01065616    JAV68409.1    KQ434899    KZC10882.1    KQ764145    OAD54594.1    GL888321    EGI62867.1    KQ982562    KYQ54850.1    GL448826    EFN83696.1    KQ981993    KYN30983.1    QOIP01000010    RLU17968.1    ADTU01026033    KQ976424    KYM88668.1    LBMM01000489    KMQ98237.1    KK107549    EZA49038.1    GBBI01000895    JAC17817.1    GFTR01008428    JAW07998.1    GBGD01000301    JAC88588.1    GECL01002534    JAP03590.1    GECZ01005660    JAS64109.1    KQ978983    KYN26752.1    GEDC01011306    JAS25992.1    KQ976881    KYN07621.1    GEDC01001202    JAS36096.1    GECU01034299    JAS73407.1    AJVK01010232   

Proteomes

UP000053268    UP000218220    UP000235965    UP000053825    UP000000311    UP000215335    + More
UP000076502    UP000007755    UP000075809    UP000008237    UP000078541    UP000279307    UP000005205    UP000078540    UP000036403    UP000053097    UP000078492    UP000078542    UP000092462   

Pfam

PF16529   Ge1_WD40

Interpro

IPR036322   WD40_repeat_dom_sf        + More
IPR032401   EDC4_WD40       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       

SUPFAM

SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A194PYS7   A0A2A4JUR8   A0A2J7QWF8   A0A0L7RC16   E2AXF8   A0A232EKD6   + More
A0A1B6MJB4   A0A1Y1L3Y4   A0A154PGB8   A0A310S8S1   F4WSF0   A0A151X3L7   E2BKU7   A0A195ERX8   A0A3L8DDI1   A0A158NTM2   A0A195BRA0   A0A0J7L5J4   A0A026VZ10   A0A023F8T6   A0A224XDY0   A0A069DWY6   A0A0V0G6F1   A0A1B6GNW8   A0A195EFV6   A0A1B6DK13   A0A195D453   A0A1B6EDS9   A0A1B6HFA4   A0A1B0D1F1  

PDB

2VXG     E-value=9.70849e-16,     Score=208

KEGG

101747045    K12616 enhancer of mRNA-decapping protein 4 | (RefSeq) enhancer of mRNA-decapping protein 4-like

GO

GO:0005515   GO:0019079   GO:0043066   GO:0043154   GO:0006508   GO:0006811   GO:0016020   GO:0003779   GO:0016021  

Length:

1096

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.14011

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00557

outside

1  -  1096

 

 

Pi

248.792382

Theta

191.58898

Tajima's D

1.17867

CLR

0.130709

CSRT

0.707014649267537

Interpretation

Uncertain