Gene

KWMTBOMO01657

Pre Gene Modal

BGIBMGA006102

Annotation

hypothetical_protein_KGM_07380_[Danaus_plexippus]

Location

Bomo_Chr4(+):1046940-1048146      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.844 Nuclear   Reliability : 2.444

CDS

ATGGAAAACGATCTAGACAAAGTCGTAGAAGAAATCATGTCTATGCCTAATGTCAATGGCTGTCTTATCGCGGACCCACAAGGACTATGCTTGGCATCAAAAGGCGCCGCGCACGTAGACTCTGCAGGGATAATCGTTGCCATATCAGAACAGGCCTGTAAAATACAACCGAACATGAAACCGCCCACAGTTTGCCTTGAAACTGATAAAAAACAGTGCCTCATACAACGACATGGCACGATCACCGGAGCGATTTTTAAATTGAAAACATAG

Protein

MENDLDKVVEEIMSMPNVNGCLIADPQGLCLASKGAAHVDSAGIIVAISEQACKIQPNMKPPTVCLETDKKQCLIQRHGTITGAIFKLKT

Similarity

Belongs to the bacterial ribosomal protein bL20 family.

Uniprot

H9J9B0   A0A212EZ56   A0A2H1WT84   A0A0L7KUR4   A0A2W1BE22   A0A2A4JJ67   + More
A0A194R6H2   A0A194PYT8   S4PAX4   A0A0K8TNK7   A0A1A9XIS8   A0A1B0AX82   A0A0L0BUE4   A0A1W4X2D7   A0A1I8MK19   A0A1L8ECZ9   A0A1I8Q0Y0   D6WVA4   E2C1K2   U5EKL4   A0A2A3EG32   A0A1B0CUR0   A0A088A4G7   A0A182RZF3   A0A182PS10   J9HHX8   A0A154PKM0   A0A182VQ39   A0A1L8DAA1   A0A1W4VTR2   A0A1Q3G3Q8   B4M2Y0   B4MT06   A0A182WVU3   A0A182KXG6   Q7QAS0   A0A182HZ96   A0A232EXJ6   A0A1L8DAM6   B4PY63   A0A1L8DAA6   B4L842   B3P9M4   A0A336MHY6   B4NTW5   B4I9I9   A0A336MZK6   A0A0J7KK78   A0A336KGR7   A0A1B0DAD7   B4JWZ2   K7J509   A0A1J1IN97   B4H2M7   A0A1B0FGX4   B3MR24   A0A0L7QMQ1   A0A1W7R4Y2   Q29IK9   W4XHE1   O96824   A0A0V0G978   A0A3B0K4N5   A0A182JZ52   A0A151I395   A0A158NVH4   A0A2P6KS50   A0A023EYW9   A0A2P8ZIK3   A0A2M4CGZ0   A0A2M3ZCK0   A0A2M4AMT5   A0A2M4C4V9   A0A182NSP6   A0A0P4VXH1   A0A182HCI4   A0A2M4AMS3   J9HS86   E9HIJ4   A0A067RFQ5   V4AHL4   A0A151J9W4   A0A397SQE3   F4WR38   A0A1S3ICE7   A0A2C9LAB9   A0A015KZI4   A0A372QHD8   U9STI1   A0A2I1EC20   A0A1V4KX23   A0A210PYU7   A0A0M5J314   A0A2U3XN45   A0A0N8DA40   F1NRX4   A0A087UII1   A0A2Z6QQG4   N6UH29  

Pubmed

19121390    22118469    26227816    28756777    26354079    23622113    + More
26369729    26108605    25315136    18362917    19820115    20798317    17510324    17994087    20966253    12364791    14747013    17210077    28648823    17550304    20075255    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    21347285    25474469    29403074    27129103    26483478    21292972    24845553    23254933    21719571    15562597    24277808    30271968    29355972    28812685    15592404    23537049   

EMBL

BABH01004402    AGBW02011391    OWR46737.1    ODYU01010496    SOQ55644.1    JTDY01005581    + More
KOB66865.1    KZ150105    PZC73439.1    NWSH01001389    PCG71442.1    KQ460644    KPJ13262.1    KQ459584    KPI98491.1    GAIX01006217    JAA86343.1    GDAI01001654    JAI15949.1    JXJN01005128    JRES01001325    KNC23613.1    GFDG01002346    JAV16453.1    KQ971363    EFA09095.1    GL451937    EFN78178.1    GANO01001765    JAB58106.1    KZ288266    PBC30252.1    AJWK01029612    CH477264    EJY57454.1    KQ434948    KZC12396.1    GFDF01010696    JAV03388.1    GFDL01000602    JAV34443.1    CH940651    EDW65155.1    CH963851    EDW75245.1    AAAB01008888    EAA08876.2    APCN01005504    NNAY01001757    OXU23018.1    GFDF01010694    JAV03390.1    CM000162    EDX00936.1    GFDF01010695    JAV03389.1    CH933814    EDW05617.1    CH954183    EDV45520.1    UFQT01001127    SSX29051.1    CH983367    EDX16412.1    CH480825    EDW43870.1    UFQT01004394    SSX35676.1    LBMM01006323    KMQ90697.1    UFQS01000447    UFQT01000447    SSX04054.1    SSX24419.1    AJVK01013276    CH916376    EDV95268.1    CVRI01000056    CRL01701.1    CH479204    EDW30594.1    CCAG010009006    CH902622    EDV34229.1    KQ414885    KOC59870.1    GEHC01001419    JAV46226.1    CH379063    EAL32644.2    AAGJ04012916    AE014298    AY113514    AL024456    AAF45672.1    AAM29519.1    AGB94990.1    CAA19662.1    GECL01002311    JAP03813.1    OUUW01000003    SPP78428.1    KQ976494    KYM83291.1    ADTU01027159    MWRG01006134    PRD29157.1    GBBI01004853    JAC13859.1    PYGN01000046    PSN56322.1    GGFL01000444    MBW64622.1    GGFM01005464    MBW26215.1    GGFK01008773    MBW42094.1    GGFJ01011193    MBW60334.1    GDKW01001230    JAI55365.1    JXUM01033392    KQ560986    KXJ80113.1    GGFK01008774    MBW42095.1    EJY57453.1    GL732655    EFX68450.1    KK852715    KDR17865.1    KB199981    ESP03554.1    KQ979348    KYN21855.1    QKYT01000341    RIA86836.1    GL888284    EGI63265.1    JEMT01014909    EXX72989.1    QKKE01000556    RGB27142.1    KI299692    BDIQ01000129    AUPC02000420    ERZ97352.1    GBC41089.1    POG59927.1    LLXJ01000191    LLXH01000138    LLXL01000138    LLXK01000308    LLXI01000384    PKC13425.1    PKC72125.1    PKK77279.1    PKY19668.1    PKY45440.1    LSYS01001493    OPJ89000.1    NEDP02005379    OWF41609.1    CP012528    ALC48448.1    GDIP01053927    GDIQ01028480    LRGB01002849    JAM49788.1    JAN66257.1    KZS06124.1    AADN05000168    KK119957    KFM77170.1    BEXD01000384    GBB86981.1    APGK01035767    KB740928    KB631763    ENN77952.1    ERL85935.1   

Proteomes

UP000005204    UP000007151    UP000037510    UP000218220    UP000053240    UP000053268    + More
UP000092443    UP000092460    UP000037069    UP000192223    UP000095301    UP000095300    UP000007266    UP000008237    UP000242457    UP000092461    UP000005203    UP000075900    UP000075885    UP000008820    UP000076502    UP000075920    UP000192221    UP000008792    UP000007798    UP000076407    UP000075882    UP000007062    UP000075840    UP000215335    UP000002282    UP000009192    UP000008711    UP000000304    UP000001292    UP000036403    UP000092462    UP000001070    UP000002358    UP000183832    UP000008744    UP000092444    UP000007801    UP000053825    UP000001819    UP000007110    UP000000803    UP000268350    UP000075881    UP000078540    UP000005205    UP000245037    UP000075884    UP000069940    UP000249989    UP000000305    UP000027135    UP000030746    UP000078492    UP000265703    UP000007755    UP000085678    UP000076420    UP000022910    UP000263633    UP000018888    UP000236242    UP000232688    UP000232722    UP000233469    UP000234323    UP000190648    UP000242188    UP000092553    UP000245341    UP000076858    UP000000539    UP000054359    UP000247702    UP000019118    UP000030742   

PRIDE

H9J9B0    O96824   

Pfam

PF16672   LAMTOR5        + More
PF00453   Ribosomal_L20

Interpro

IPR024135   LAMTOR5        + More
IPR035566   Ribosomal_protein_L20_C       
IPR005813   Ribosomal_L20       

SUPFAM

SSF74731   SSF74731       

Gene 3D

1.10.1900.20    

CDD

cd07026  Ribosomal_L20

ProteinModelPortal

H9J9B0   A0A212EZ56   A0A2H1WT84   A0A0L7KUR4   A0A2W1BE22   A0A2A4JJ67   + More
A0A194R6H2   A0A194PYT8   S4PAX4   A0A0K8TNK7   A0A1A9XIS8   A0A1B0AX82   A0A0L0BUE4   A0A1W4X2D7   A0A1I8MK19   A0A1L8ECZ9   A0A1I8Q0Y0   D6WVA4   E2C1K2   U5EKL4   A0A2A3EG32   A0A1B0CUR0   A0A088A4G7   A0A182RZF3   A0A182PS10   J9HHX8   A0A154PKM0   A0A182VQ39   A0A1L8DAA1   A0A1W4VTR2   A0A1Q3G3Q8   B4M2Y0   B4MT06   A0A182WVU3   A0A182KXG6   Q7QAS0   A0A182HZ96   A0A232EXJ6   A0A1L8DAM6   B4PY63   A0A1L8DAA6   B4L842   B3P9M4   A0A336MHY6   B4NTW5   B4I9I9   A0A336MZK6   A0A0J7KK78   A0A336KGR7   A0A1B0DAD7   B4JWZ2   K7J509   A0A1J1IN97   B4H2M7   A0A1B0FGX4   B3MR24   A0A0L7QMQ1   A0A1W7R4Y2   Q29IK9   W4XHE1   O96824   A0A0V0G978   A0A3B0K4N5   A0A182JZ52   A0A151I395   A0A158NVH4   A0A2P6KS50   A0A023EYW9   A0A2P8ZIK3   A0A2M4CGZ0   A0A2M3ZCK0   A0A2M4AMT5   A0A2M4C4V9   A0A182NSP6   A0A0P4VXH1   A0A182HCI4   A0A2M4AMS3   J9HS86   E9HIJ4   A0A067RFQ5   V4AHL4   A0A151J9W4   A0A397SQE3   F4WR38   A0A1S3ICE7   A0A2C9LAB9   A0A015KZI4   A0A372QHD8   U9STI1   A0A2I1EC20   A0A1V4KX23   A0A210PYU7   A0A0M5J314   A0A2U3XN45   A0A0N8DA40   F1NRX4   A0A087UII1   A0A2Z6QQG4   N6UH29  

PDB

6B9X     E-value=7.87676e-10,     Score=146

KEGG

101746912    K16344 ragulator complex protein LAMTOR5 | (RefSeq) ragulator complex protein LAMTOR5

PATHWAY

04150    mTOR signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0071986   GO:0043154   GO:0019079   GO:1904263   GO:0005764   GO:0071230   GO:0003735   GO:0019843   GO:0006412   GO:0005840   GO:0032008   GO:0005829   GO:0005737   GO:0043066   GO:0006508   GO:0006811   GO:0016020   GO:0005515   GO:0003779   GO:0016021  

PANTHER

PTHR13342   PTHR10986  

Length:

90

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00911

Exp number, first 60 AAs:

0.00897

Total prob of N-in:

0.31604

outside

1  -  90

 

 

Pi

274.154914

Theta

189.525111

Tajima's D

1.394933

CLR

0

CSRT

0.764811759412029

Interpretation

Uncertain