Gene

KWMTBOMO01655

Pre Gene Modal

BGIBMGA006048

Annotation

PREDICTED:_inactive_hydroxysteroid_dehydrogenase-like_protein_1_[Bombyx_mori]

Location

Bomo_Chr4(-):1011399-1025019      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.98

CDS

ATGTTTTTCACGTTGTTAATAGTTCTCCTAGTTGTAATCGGTTTGTTGGCTGTGTTGTCGATTGCTCTGGACTCGCTGTGGAGTCCTTTAGAGTTGGTTTCGTCTTATTTGATGCCGTACTTCCTGCCCGCCGAGGATCAGCCGCTGACCAAAAAGTTCGGATCGTGGGCCGTTGTGACCGGCGGCACGGACGGTATCGGTAAGCACTACGCCAAGGAGCTGGCACGACGCGGCCTCAACGTGGTCATCATCAGCAGAAACCCTGAAAAATTGAAAGCAACGGTCACTGAAATCGAAAAAGAACACAACGTGAAAACCAAGATGGTGGTTGCTGACTTCAGTAAAGGCCTTGAAGTGTACGCTCATATCGAAGAGGAACTCAAAGACATTCCTATCGGTATACTAGTGAACAATGTTGGCGTACAGTACGATTACCCGACGGAGCTTGGTGACCTGCCGATGTCGAAAGCGTGGGAGATAGTCCACGTGAATGTCGGAGCCGTTACCAGTATGACCAGGCTCGTGGTAAAGGAGATGGCCAAGAGGGGAAAGGGTGCTGTGGTCAACGTGTCTTCCGGCTCCGAGCTGCAGCCACTGCCGTTGATGGCTGTGTACGCAGCTACCAAGGCTTACGTTCGCAGTTTCACACTGGCGATTCGCGAAGAATACGCTCCTAAAGGGATCCACGTTCAGCACATGTCGCCACTTTTCGTGTCAACGAAGATGAACTCGTTCTCCCAGCGGCTTCTCGATGGGAACCTGCTGGTGCCTGATGCTGCCACTTACGCAAAACACGCAGCGGCTACTCTCGGTCGTGTACATGACACCACTGGGTATTGGCTTCATGGAATACAGGTATGGACGTAA

Protein

MFFTLLIVLLVVIGLLAVLSIALDSLWSPLELVSSYLMPYFLPAEDQPLTKKFGSWAVVTGGTDGIGKHYAKELARRGLNVVIISRNPEKLKATVTEIEKEHNVKTKMVVADFSKGLEVYAHIEEELKDIPIGILVNNVGVQYDYPTELGDLPMSKAWEIVHVNVGAVTSMTRLVVKEMAKRGKGAVVNVSSGSELQPLPLMAVYAATKAYVRSFTLAIREEYAPKGIHVQHMSPLFVSTKMNSFSQRLLDGNLLVPDAATYAKHAAATLGRVHDTTGYWLHGIQVWT

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9J956   A0A2W1BF62   A0A194Q0G6   I4DPM9   A0A194R616   A0A1L8DZ69   + More
A0A1L8DYP3   A0A1B0GKX7   A0A1Y1M4L3   A0A2A4JG60   D6WN07   A0A1Y1M9I6   A0A0L0BS07   A0A1A9WL20   A0A2H1W2C5   W8BCS0   W8BHQ7   A0A0A1WFH5   A0A0A1WT83   A0A2C9GS57   A0A182MP58   A0A023F3V8   K7J1P8   A0A224XKX2   A0A1S4GYN2   A0A182UUY6   A0A182KMI3   A0A182UG21   A0A182IQG5   A0A0V0G9A4   A0A0K8VLN1   A0A182NTA5   A0A084VUV2   A0A182QW36   A0A0P6JSU2   A0A1I8ML52   A0A023ENN4   W5J4S0   A0A182P4K2   A0A0K8UZP2   T1PJR0   A0A182F1A4   A0A212EMX8   A0A182RWA4   A0A182Y9P5   A0A034W898   U4UJN8   A0A1A9WL19   A0A1I8NPE7   N6ULG0   J3JUC0   B0WNB3   A0A1A9XT88   A0A2S2NBB4   A0A0L7RI89   A0A182WRV7   A0A1A9ZCY6   A0A1Q3F1E5   C4WU15   A0A023EPR8   A0A232F1P4   A0A1B0FG51   A0A0A9YJR7   A0A1B6EBX6   A0A1B6L3U3   A0A1B6IV31   A0A2H8TMP7   T1HFB4   U5EIA3   A0A1L8DYQ4   A0A1J1HF19   A0A2S2QSF1   A0A2J7QJW4   A0A2A3E1T5   A0A0A1XRZ1   A0A0Q9XD10   B4KJQ9   A0A0M4E2G4   A0A3L8DPZ3   A0A026VVA5   A0A088AAE3   A0A195CJW5   A0A151X1F4   A0A195ETR6   A0A195DVJ3   F4W3Z5   B4LV86   E2APP5   B4JQW7   T1DPK7   A0A0J7NWS7   E2BBS8   A0A1A9UVE8   B4I563   A0A1A9WL14   B4N915   A0A336KUV6   A0A1B0AUP3   A0A1W4VXF8   A0A1W4VWK6  

Pubmed

19121390    28756777    26354079    22651552    28004739    18362917    + More
19820115    26108605    24495485    25830018    25474469    20075255    12364791    20966253    24438588    26999592    25315136    24945155    20920257    23761445    22118469    25244985    25348373    23537049    22516182    28648823    25401762    17994087    30249741    24508170    21719571    20798317   

EMBL

BABH01004399    KZ150105    PZC73438.1    KQ459584    KPI98489.1    AK403684    + More
BAM19869.1    KQ460644    KPJ13263.1    GFDF01002502    JAV11582.1    GFDF01002501    JAV11583.1    AJWK01033922    AJWK01033923    AJWK01033924    GEZM01042277    JAV79978.1    NWSH01001696    PCG70403.1    KQ971343    EFA04333.2    GEZM01042278    JAV79977.1    JRES01001454    KNC22806.1    ODYU01005870    SOQ47198.1    GAMC01010098    JAB96457.1    GAMC01010097    JAB96458.1    GBXI01016861    GBXI01006921    JAC97430.1    JAD07371.1    GBXI01012481    JAD01811.1    APCN01000722    AXCM01001453    AXCM01001454    AXCM01001455    GBBI01002616    JAC16096.1    GFTR01004702    JAW11724.1    AAAB01008944    GECL01001534    JAP04590.1    GDHF01012523    JAI39791.1    ATLV01017026    KE525143    KFB41746.1    AXCN02000718    GDUN01000001    JAN95918.1    GAPW01002566    JAC11032.1    ADMH02002200    ETN57860.1    GDHF01032144    GDHF01020172    GDHF01012506    GDHF01002857    GDHF01000530    JAI20170.1    JAI32142.1    JAI39808.1    JAI49457.1    JAI51784.1    KA648188    AFP62817.1    AGBW02013781    OWR42829.1    GAKP01008018    JAC50934.1    KB632224    ERL90215.1    APGK01028290    APGK01028291    APGK01028292    KB740686    ENN79537.1    BT126833    AEE61795.1    DS232009    EDS31561.1    GGMR01001633    MBY14252.1    KQ414585    KOC70544.1    GFDL01013737    JAV21308.1    ABLF02034255    ABLF02034261    AK340863    BAH71385.1    GAPW01002565    JAC11033.1    NNAY01001239    OXU24641.1    CCAG010010519    GBHO01012261    JAG31343.1    GEDC01001908    JAS35390.1    GEBQ01021642    JAT18335.1    GECU01016909    JAS90797.1    GFXV01003127    MBW14932.1    ACPB03015453    ACPB03015454    GANO01002709    JAB57162.1    GFDF01002527    JAV11557.1    CVRI01000001    CRK86576.1    GGMS01011441    MBY80644.1    NEVH01013548    PNF28881.1    KZ288444    PBC25660.1    GBXI01000545    JAD13747.1    CH933807    KRG02724.1    EDW11504.1    CP012523    ALC39791.1    QOIP01000005    RLU22467.1    KK107847    EZA47466.1    KQ977642    KYN01020.1    KQ982585    KYQ54227.1    KQ981979    KYN31551.1    KQ980295    KYN16898.1    GL887491    EGI70991.1    CH940649    EDW64346.2    GL441572    EFN64596.1    CH916372    EDV99297.1    GAMD01001845    JAA99745.1    LBMM01001129    KMQ96870.1    GL447151    EFN86854.1    CH480822    EDW55519.1    CH964232    EDW80520.1    UFQS01000988    UFQT01000988    SSX08266.1    SSX28309.1    JXJN01003706   

Proteomes

UP000005204    UP000053268    UP000053240    UP000092461    UP000218220    UP000007266    + More
UP000037069    UP000091820    UP000075840    UP000075883    UP000002358    UP000075903    UP000075882    UP000075902    UP000075880    UP000075884    UP000030765    UP000075886    UP000095301    UP000000673    UP000075885    UP000069272    UP000007151    UP000075900    UP000076408    UP000030742    UP000095300    UP000019118    UP000002320    UP000092443    UP000053825    UP000076407    UP000092445    UP000007819    UP000215335    UP000092444    UP000015103    UP000183832    UP000235965    UP000242457    UP000009192    UP000092553    UP000279307    UP000053097    UP000005203    UP000078542    UP000075809    UP000078541    UP000078492    UP000007755    UP000008792    UP000000311    UP000001070    UP000036403    UP000008237    UP000078200    UP000001292    UP000007798    UP000092460    UP000192221   

PRIDE

H9J956   

Pfam

PF00106   adh_short        + More
PF00520   Ion_trans
PF00027   cNMP_binding
PF10149   TM231
PF02949   7tm_6

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR020904   Sc_DH/Rdtase_CS       
IPR002347   SDR_fam       
IPR014710   RmlC-like_jellyroll       
IPR018490   cNMP-bd-like       
IPR000595   cNMP-bd_dom       
IPR005821   Ion_trans_dom       
IPR019306   TMEM231       
IPR004117   7tm6_olfct_rcpt       

SUPFAM

SSF51735   SSF51735        + More
SSF51206   SSF51206       

Gene 3D

2.60.120.10    

CDD

cd00038  CAP_ED

ProteinModelPortal

H9J956   A0A2W1BF62   A0A194Q0G6   I4DPM9   A0A194R616   A0A1L8DZ69   + More
A0A1L8DYP3   A0A1B0GKX7   A0A1Y1M4L3   A0A2A4JG60   D6WN07   A0A1Y1M9I6   A0A0L0BS07   A0A1A9WL20   A0A2H1W2C5   W8BCS0   W8BHQ7   A0A0A1WFH5   A0A0A1WT83   A0A2C9GS57   A0A182MP58   A0A023F3V8   K7J1P8   A0A224XKX2   A0A1S4GYN2   A0A182UUY6   A0A182KMI3   A0A182UG21   A0A182IQG5   A0A0V0G9A4   A0A0K8VLN1   A0A182NTA5   A0A084VUV2   A0A182QW36   A0A0P6JSU2   A0A1I8ML52   A0A023ENN4   W5J4S0   A0A182P4K2   A0A0K8UZP2   T1PJR0   A0A182F1A4   A0A212EMX8   A0A182RWA4   A0A182Y9P5   A0A034W898   U4UJN8   A0A1A9WL19   A0A1I8NPE7   N6ULG0   J3JUC0   B0WNB3   A0A1A9XT88   A0A2S2NBB4   A0A0L7RI89   A0A182WRV7   A0A1A9ZCY6   A0A1Q3F1E5   C4WU15   A0A023EPR8   A0A232F1P4   A0A1B0FG51   A0A0A9YJR7   A0A1B6EBX6   A0A1B6L3U3   A0A1B6IV31   A0A2H8TMP7   T1HFB4   U5EIA3   A0A1L8DYQ4   A0A1J1HF19   A0A2S2QSF1   A0A2J7QJW4   A0A2A3E1T5   A0A0A1XRZ1   A0A0Q9XD10   B4KJQ9   A0A0M4E2G4   A0A3L8DPZ3   A0A026VVA5   A0A088AAE3   A0A195CJW5   A0A151X1F4   A0A195ETR6   A0A195DVJ3   F4W3Z5   B4LV86   E2APP5   B4JQW7   T1DPK7   A0A0J7NWS7   E2BBS8   A0A1A9UVE8   B4I563   A0A1A9WL14   B4N915   A0A336KUV6   A0A1B0AUP3   A0A1W4VXF8   A0A1W4VWK6  

PDB

4KMS     E-value=4.62941e-19,     Score=231

KEGG

101746771    no KO assigned | (RefSeq) inactive hydroxysteroid dehydrogenase-like protein 1

GO

GO:0016021   GO:0016491   GO:0005216   GO:0005549   GO:0004984   GO:0008285   GO:0005783   GO:0007030   GO:0008270   GO:0015074   GO:0004190   GO:0006508   GO:0006811   GO:0016020   GO:0005515   GO:0003779  

Length:

288

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.44306

Exp number, first 60 AAs:

22.24454

Total prob of N-in:

0.98912

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  27

outside

28  -  288

 

 

Pi

204.528702

Theta

176.582571

Tajima's D

0.485524

CLR

305.937241

CSRT

0.503574821258937

Interpretation

Uncertain