Gene

KWMTBOMO01650  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006055

Annotation

dermal_papilla_derived_protein_13_[Bombyx_mori]

Location

Bomo_Chr4(-):924913-929441      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.51 Nuclear   Reliability : 1.168

CDS

ATGACCTTGGGCGATTTAGGCGCGAATGTAATAAAAGTGGAAAGCCTAAGCGGAGACGAGGCCCGAAAATGGGGCCCCCCTTTTATGAAGGACTGCGGGGATTCTTATTATTTTCAATCTGTGAATAGGAATAAGAAAAGCATTTGTATTGACTTCAAGTCACAGGAAGGAAAGAAAATAATATATGATCTAGCAAAGAAATGTGATGTGCTAGTAGAGAACTTCATTCCTGGGAAACTGGACCAGATGGATGTAGGATATGAAAAGCTTAAAACTGTCAACCCTAAGCTTATATACTGTGCTATCACAGGTTTTGGACCTAGAGGACCATATACAAAAAAACCTGGATATGATGTAATAGCAGCAGCTATGGGTGGACTGCTACACACTACAGGTGAACGCAATGGGAACCCAGTAAAAACAGGTGTAGCAATCACTGACATTACAACTGGCCTGCATGCCTTCGGAGCGATCATGGCGGCATTATACCACCGTAATAGCACTGGCCGTGGTCAAAAGATTGACTGTAATTTACTCTCCACTCAGATATCAAGTATGATCAATATAGCCACAATTTATTTGAACTGTGGTGTTGAGGGTCAACGTTGGGGAACGGCACATGCTAATCTGGTCCCTTACCAGGCTTTCAAAACTAAAGATGGTTATATGGTTATTGGTACAGGATCGAATCCACAATTTGCTGACTTCTGTAAGCTCATAAATCGTGAAGATCTTATAACCGATGAAAGGTTCAAGGATAATTCTAATAGAGTGGAAAATAGAGATGAAATTATCAAAATCATTAGTGATGTTATCATTACAAAGACAAGCAGAGAATGGAGTGCTTTATTTAAAGATGCAACCTTTCCCAATGGACCAATTAATACTATGAAAGATGTCTTTGATGATGAGCATGTAAAAGAAATAGGATTGGTTAAAGAATTACAGCACACAAGTGCAGGGACTCTGAAGGAATCCGTGGAGCGTGTAGCTGTAATAACTCTGAGGCCGACTCGGACTGAACCTCGGAAGAAGGTTGTCTGGACCGAGGACACAGTCGACAATGAACACATGAACAAAAAGAAATCTAAATGTTGTTGTATATACGAGAAGCCTCGTCGTTTCGGTGAATCGGACAGCGAAGACAGCGACGACGAATGCGAGCACTGCTTCGGTCACGTCGAGCGCCGGCACCGACATCCCCCCGCGAGCACCCCCGCGGCGCAGTTGGCGACAGAGGCGGAGTCGCCGGCGTGTATAACGTTGCAGCCCCCCGAGCCTTCGCCCCCAGACGGAGCCCCGACACATACAGAATAA

Protein

MTLGDLGANVIKVESLSGDEARKWGPPFMKDCGDSYYFQSVNRNKKSICIDFKSQEGKKIIYDLAKKCDVLVENFIPGKLDQMDVGYEKLKTVNPKLIYCAITGFGPRGPYTKKPGYDVIAAAMGGLLHTTGERNGNPVKTGVAITDITTGLHAFGAIMAALYHRNSTGRGQKIDCNLLSTQISSMINIATIYLNCGVEGQRWGTAHANLVPYQAFKTKDGYMVIGTGSNPQFADFCKLINREDLITDERFKDNSNRVENRDEIIKIISDVIITKTSREWSALFKDATFPNGPINTMKDVFDDEHVKEIGLVKELQHTSAGTLKESVERVAVITLRPTRTEPRKKVVWTEDTVDNEHMNKKKSKCCCIYEKPRRFGESDSEDSDDECEHCFGHVERRHRHPPASTPAAQLATEAESPACITLQPPEPSPPDGAPTHTE

Uniprot

H9J963   Q2F609   A0A194PYT3   A0A212EMW3   A0A2W1BE09   A0A2A4JFJ8   + More
A0A2H1VSH8   A0A0L7L957   A0A194RBI9   A0A182R1T2   A0A182JNE2   A0A084VD18   A0A182V9L5   A0A182NNV5   A0A182XHC3   D6WKE1   A0A1B0CQ71   A0A182IVA2   U4UC46   N6U6S0   A0A182F328   A0A3L8DBX4   E2AU88   A0A026WK31   A0A182GU29   A0A151IAC6   F4WBM5   A0A232F4B5   A0A182Y653   A0A195FSG4   E9J8N5   A0A182HR44   A0A336KQ73   A0A1J1I199   A0A087ZV45   A0A182UFH8   A0A195BE17   A0A1I8MYV0   A0A182PDX8   T1HIA7   A0A1I8PUC3   A0A0L0CLN7   W5JRW7   E2BMU5   A0A195DII3   A0A2M4BQK1   A0A1A9YB04   A0A182QZB1   A0A2M4BRD7   A0A182W8L6   A0A2R7VU49   A0A2M4BQT0   A0A1B0B701   A0A182LUJ6   A0A1Y1MU42   A0A2M4AFM6   A0A2M4AJ15   A0A2M4AFZ1   B0WGB1   J3JYE5   A0A2A3E8G5   B3M0C3   A0A0B4J2S9   A0A336MR01   B4M197   A0A034W5K1   A0A0K8UDL0   Q1DGN7   W8C4Z1   A0A1Q3FQ16   A0A3B0JJQ2   A0A1S4G4Z6   A0A0A1WYV5   Q29CH3   B4GN22   A0A0M5J2F5   A0A154PPC0   A0A1L8DYS3   A0A1L8DYT0   E0VEN5   A0A0J7KN69   B4JXT1   B4K7R3   A0A0L7RG66   A0A1W4UXN4   A0A158NRI5   A0A1B6E5S2   B4QS23   A0A1B6EF02   A0A1B6FFJ9   B3NYX6   A0A0R1EE95   A0A2P8YV24   Q9VDL4   B4NFW6   B4IIB3   A0A1B6L2Q3   B4PPP1   G3MQ84   E9G681  

Pubmed

19121390    26354079    22118469    28756777    26227816    24438588    + More
18362917    19820115    23537049    30249741    20798317    24508170    26483478    21719571    28648823    25244985    21282665    25315136    26108605    20920257    23761445    28004739    22516182    17994087    20075255    25348373    17510324    24495485    25830018    15632085    20566863    21347285    17550304    29403074    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22216098    21292972   

EMBL

BABH01004384    DQ311263    ABD36208.1    KQ459584    KPI98486.1    AGBW02013781    + More
OWR42832.1    KZ150105    PZC73429.1    NWSH01001558    PCG70865.1    ODYU01004196    SOQ43803.1    JTDY01002259    KOB71781.1    KQ460644    KPJ13266.1    ATLV01011129    KE524642    KFB35862.1    KQ971342    EFA03593.2    AJWK01023182    KB632288    ERL91509.1    APGK01037500    KB740948    ENN77345.1    QOIP01000010    RLU17806.1    GL442815    EFN62945.1    KK107167    EZA56328.1    JXUM01018516    KQ560515    KXJ82030.1    KQ978229    KYM96218.1    GL888066    EGI68303.1    NNAY01001043    OXU25369.1    KQ981280    KYN43381.1    GL769036    EFZ10803.1    APCN01001643    UFQS01000633    UFQT01000633    SSX05575.1    SSX25934.1    CVRI01000038    CRK93979.1    KQ976511    KYM82442.1    ACPB03006711    JRES01000232    KNC33142.1    ADMH02000277    ETN67152.1    GL449347    EFN82980.1    KQ980824    KYN12632.1    GGFJ01006198    MBW55339.1    AXCN02001989    GGFJ01006197    MBW55338.1    KK854087    PTY11016.1    GGFJ01006192    MBW55333.1    JXJN01009332    AXCM01000658    GEZM01021200    JAV89089.1    GGFK01006265    MBW39586.1    GGFK01007455    MBW40776.1    GGFK01006311    MBW39632.1    DS231924    EDS26849.1    BT128271    AEE63231.1    KZ288348    PBC27479.1    CH902617    EDV43129.1    AAZX01003264    UFQT01000999    SSX28388.1    CH940650    EDW67508.1    GAKP01009552    JAC49400.1    GDHF01027577    JAI24737.1    CH901046    EAT32316.1    GAMC01009296    JAB97259.1    GFDL01005467    JAV29578.1    OUUW01000007    SPP82584.1    GBXI01010592    JAD03700.1    CM000070    EAL26673.1    CH479186    EDW39148.1    CP012526    ALC47198.1    KQ435007    KZC13587.1    GFDF01002464    JAV11620.1    GFDF01002490    JAV11594.1    DS235093    EEB11841.1    LBMM01005228    KMQ91689.1    CH916377    EDV90493.1    CH933806    EDW16434.1    KQ414598    KOC69819.1    ADTU01024047    GEDC01004033    JAS33265.1    CM000364    EDX12219.1    GEDC01000786    JAS36512.1    GECZ01020804    JAS48965.1    CH954181    EDV48379.1    CH892488    KRK05508.1    PYGN01000343    PSN48104.1    AE014297    AY119018    AAF55777.1    AAM50878.1    CH964251    EDW83183.1    CH480842    EDW49657.1    GEBQ01022052    JAT17925.1    CM000160    EDW96141.1    JO844035    AEO35652.1    GL732533    EFX85037.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000218220    UP000037510    UP000053240    + More
UP000075900    UP000075881    UP000030765    UP000075903    UP000075884    UP000076407    UP000007266    UP000092461    UP000075880    UP000030742    UP000019118    UP000069272    UP000279307    UP000000311    UP000053097    UP000069940    UP000249989    UP000078542    UP000007755    UP000215335    UP000076408    UP000078541    UP000075840    UP000183832    UP000005203    UP000075902    UP000078540    UP000095301    UP000075885    UP000015103    UP000095300    UP000037069    UP000000673    UP000008237    UP000078492    UP000092443    UP000075886    UP000075920    UP000092460    UP000075883    UP000002320    UP000242457    UP000007801    UP000002358    UP000008792    UP000008820    UP000268350    UP000001819    UP000008744    UP000092553    UP000076502    UP000009046    UP000036403    UP000001070    UP000009192    UP000053825    UP000192221    UP000005205    UP000000304    UP000008711    UP000002282    UP000245037    UP000000803    UP000007798    UP000001292    UP000000305   

PRIDE

H9J963    Q2F609    Q9VDL4   

Pfam

PF02515   CoA_transf_3        + More
PF07491   PPI_Ypi1
PF12937   F-box-like
PF00400   WD40

Interpro

IPR003673   CoA-Trfase_fam_III        + More
IPR011107   PPI_Ypi1       
IPR023606   CoA-Trfase_III_dom_sf       
IPR036047   F-box-like_dom_sf       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001810   F-box_dom       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       

SUPFAM

SSF89796   SSF89796        + More
SSF81383   SSF81383       
SSF50978   SSF50978       

Gene 3D

3.40.50.10540     2.130.10.10    

ProteinModelPortal

H9J963   Q2F609   A0A194PYT3   A0A212EMW3   A0A2W1BE09   A0A2A4JFJ8   + More
A0A2H1VSH8   A0A0L7L957   A0A194RBI9   A0A182R1T2   A0A182JNE2   A0A084VD18   A0A182V9L5   A0A182NNV5   A0A182XHC3   D6WKE1   A0A1B0CQ71   A0A182IVA2   U4UC46   N6U6S0   A0A182F328   A0A3L8DBX4   E2AU88   A0A026WK31   A0A182GU29   A0A151IAC6   F4WBM5   A0A232F4B5   A0A182Y653   A0A195FSG4   E9J8N5   A0A182HR44   A0A336KQ73   A0A1J1I199   A0A087ZV45   A0A182UFH8   A0A195BE17   A0A1I8MYV0   A0A182PDX8   T1HIA7   A0A1I8PUC3   A0A0L0CLN7   W5JRW7   E2BMU5   A0A195DII3   A0A2M4BQK1   A0A1A9YB04   A0A182QZB1   A0A2M4BRD7   A0A182W8L6   A0A2R7VU49   A0A2M4BQT0   A0A1B0B701   A0A182LUJ6   A0A1Y1MU42   A0A2M4AFM6   A0A2M4AJ15   A0A2M4AFZ1   B0WGB1   J3JYE5   A0A2A3E8G5   B3M0C3   A0A0B4J2S9   A0A336MR01   B4M197   A0A034W5K1   A0A0K8UDL0   Q1DGN7   W8C4Z1   A0A1Q3FQ16   A0A3B0JJQ2   A0A1S4G4Z6   A0A0A1WYV5   Q29CH3   B4GN22   A0A0M5J2F5   A0A154PPC0   A0A1L8DYS3   A0A1L8DYT0   E0VEN5   A0A0J7KN69   B4JXT1   B4K7R3   A0A0L7RG66   A0A1W4UXN4   A0A158NRI5   A0A1B6E5S2   B4QS23   A0A1B6EF02   A0A1B6FFJ9   B3NYX6   A0A0R1EE95   A0A2P8YV24   Q9VDL4   B4NFW6   B4IIB3   A0A1B6L2Q3   B4PPP1   G3MQ84   E9G681  

PDB

4ED9     E-value=4.65957e-69,     Score=664

KEGG

692874    K18703 succinate---hydroxymethylglutarate CoA-transferase [EC:2.8.3.13] | (RefSeq) dermal papilla de

GO

GO:0004865   GO:0003824   GO:0016740   GO:0005634   GO:0008157   GO:0032515   GO:0035308   GO:0033608   GO:0047369   GO:0045132   GO:0004190   GO:0006508   GO:0006811   GO:0016020   GO:0005515   GO:0003779   GO:0016021  

PANTHER

PTHR20835  

Length:

438

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.42233

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00884

outside

1  -  438

 

 

Pi

286.242029

Theta

213.591

Tajima's D

1.33926

CLR

0.147274

CSRT

0.752962351882406

Interpretation

Uncertain