SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01646  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006056
Annotation
hypothetical_protein_KGM_07760_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 3.76 PlasmaMembrane   Reliability : 4.011
 

Sequence

CDS
ATGTCGTTCCGCGGTAGAGGAGGCGGCGGTGGAGGACGTGGTGGATTTGGAGGCCGTGGTGGATATGGCGGCGGAGGAGGACGAGGCGGTGGCGGAGGGCGCGGTGGCCGTGGTGGATTTGGCGGAGGCCGCGGTCGAGGGGGTGGTGGTGGCGGAGGTCGTTACCAAGATGCTGGACCGCCCGAGGCTGTTATTCCGCTCGGACATTATGGTTGGACCGTTCAAGACGATCTAGTCTGCAAAGTAGACATTGAAGACGTGCCGTATTTCAACGCGCCTATATTCCTCGAAAACAAAGAACAAATCGGCAAAATTGACGAGATATTTGGCAATCTACGAGATTACTTTGTGTCAGTCAAATTAGGAGAAAATGTCAAAGCCAAGAGTTTCAAGGAAGGGCAGCAATTTTTCATTGATCCCGCGAAGTTGCTACCTTTGAAAAGATTTTTGCCACAACCGCCTGGGGCAAAGAGAGGCGCGGGAGGTGGTAGAGGAGGCCGAGGCGGTCGTGGTGGCAGAGGTGGAGGTGGATTTGGTGGCGGCGGCAGCGGCGGTGGATTTGGCAGAGGAGGCGGTGGTCGTGGAGGAGGCGGTGGCTTCGGTAGAGGTGGCGGTGGAGGCTTCGGTAGAGGCGGCGGCGGTGGTTTCGGAAGAGGCGGCGGAGGCAGGGGTGGTGGATTCAGAGGAGGCAGAAGATAG
Protein
MSFRGRGGGGGGRGGFGGRGGYGGGGGRGGGGGRGGRGGFGGGRGRGGGGGGGRYQDAGPPEAVIPLGHYGWTVQDDLVCKVDIEDVPYFNAPIFLENKEQIGKIDEIFGNLRDYFVSVKLGENVKAKSFKEGQQFFIDPAKLLPLKRFLPQPPGAKRGAGGGRGGRGGRGGRGGGGFGGGGSGGGFGRGGGGRGGGGGFGRGGGGGFGRGGGGGFGRGGGGRGGGFRGGRR

Summary

Uniprot
ProteinModelPortal
PDB
3UAI     E-value=7.70667e-22,     Score=253

Ontologies

Topology

Length:
232
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0109
Exp number, first 60 AAs:
0.00096
Total prob of N-in:
0.02897
outside
1  -  232
 
 

Population Genetic Test Statistics

Pi
204.992713
Theta
166.485653
Tajima's D
0.745894
CLR
169.417526
CSRT
0.584770761461927
Interpretation
Uncertain
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