SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01639  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006062
Annotation
PREDICTED:_sodium/potassium-transporting_ATPase_subunit_beta-2-like_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 3.069
 

Sequence

CDS
ATGGCGGACAAGAACAAAGTAGCTGAACAGTATTACGCTCCGCCACCGGACCTAGGGAAATGGGAGGCGTTCAGGATCTTCCTGTACAACTCGGAGACGGGCCAGGTCCTCGGGCGCACAGGCTCAAGCTGGGCAAAGATCCTGCTATTTTACCTTATCTTCTACGCGATTTTGGTGGGCTTCTTCGCTGCTCTGCTAGCGGTATTCTACCAGACCCTGGACACCAAGGTGCCGAAGTGGCAGCTTGATAGTTCAATAATCGGCAGTAATCCAGGTCTGGGCTTCAGGCCAATGCCAGATACTGCCAACGTGGAAAGTACTCTGATCTATTACAAGGTCAACGATAAGGGATCTGTGCTCAAATGGGCCAGGGTTATTGACGAATTTTTGAATCAATACCGTAAGAAAGGCAGCGGCAGTGGTGAAGCTCATGGTGCCGAAAACCGCGTACCATGCTCTCCCAGCAGCGGACCACTCGGCGAGAAGCAAGTCTGTGATGTACCAGTCGATGACTTCAATCCCTGCACTCCAGCCAACCAGTACAATTACGAACAAGCCGGCCCTTGCGTCTTCCTCAAGCTCAATAAGATATACAACTGGAGGCCGCAGCCGTACAACAACACCGAGGACCTACCCACGAACATGCCCGAGGATCTCAAGCAGCACATCAAGACACTGTCTGGTAAACCCGACGCCAACACTGTGTGGGTATCCTGTGAAGGCGAGAACCCTGCTGACGTGGAGAACATCGGCCCAGTCCAGTACATCCCCCGACGCGGGTTCCCTTCCTACTACTACCCGTTCACCAACAAGGAGGGATATCTAAGCCCACTCGTTGCTGTACTCTTTGAGAAACCTAGAACCGGGGTCCTCATCAACATCGAGTGCAAAGCCTGGGCGAAGAACATCTTCTACGACCGCTACGAGAGACGCGGCTCAGTCCACTTCGAGCTGATGGTGGACCGCGCTTAA
Protein
MADKNKVAEQYYAPPPDLGKWEAFRIFLYNSETGQVLGRTGSSWAKILLFYLIFYAILVGFFAALLAVFYQTLDTKVPKWQLDSSIIGSNPGLGFRPMPDTANVESTLIYYKVNDKGSVLKWARVIDEFLNQYRKKGSGSGEAHGAENRVPCSPSSGPLGEKQVCDVPVDDFNPCTPANQYNYEQAGPCVFLKLNKIYNWRPQPYNNTEDLPTNMPEDLKQHIKTLSGKPDANTVWVSCEGENPADVENIGPVQYIPRRGFPSYYYPFTNKEGYLSPLVAVLFEKPRTGVLINIECKAWAKNIFYDRYERRGSVHFELMVDRA

Summary

EMBL
BABH01004374    BABH01004375    ODYU01004281    SOQ43982.1    KZ150105    PZC73420.1    + More
NWSH01000323    PCG77483.1    KQ460644    KPJ13276.1    KQ459584    KPI98477.1    AGBW02010580    OWR48241.1    JTDY01001561    KOB73524.1    GANO01001901    JAB57970.1    LBMM01001166    KMQ96792.1    GL439967    EFN66489.1    KK107119    QOIP01000009    EZA58727.1    RLU18942.1    GL453340    EFN76207.1    KZ288344    PBC27681.1    JR035723    JR035724    AEY56633.1    AEY56634.1    KQ766043    OAD53765.1    NNAY01000939    OXU25822.1    KK852595    KDR20642.1    GBYB01012845    JAG82612.1    KQ414813    KOC60537.1    KQ434874    KZC09650.1    KQ976453    KYM85345.1    KQ982612    KYQ53875.1    GALA01000989    JAA93863.1    GL888206    EGI65178.1    KQ981701    KYN37500.1    KQ978949    KYN27359.1    APCN01004534    APCN01004535    AAAB01008980    EAA43463.4    GFDL01002339    JAV32706.1    GFDL01002340    JAV32705.1    GAPW01002763    JAC10835.1    GAMD01002332    JAA99258.1    CH477692    EAT37221.1    AXCN02000751    AXCN02000752    GL767674    EFZ13266.1    ADTU01008618    ADTU01008619    ADTU01008620    GGFK01002957    MBW36278.1    GGFM01001261    MBW22012.1    GGFL01004447    MBW68625.1    KF813098    AHH35011.1    GGFJ01007600    MBW56741.1    UFQT01000215    SSX21830.1    GEBQ01025457    JAT14520.1    GFDF01009051    JAV05033.1    DS235812    EEB17426.1    KQ977513    KYN02163.1    GECU01030411    JAS77295.1    GFDF01009049    JAV05035.1    GECU01012359    JAS95347.1    GDJX01019345    JAT48591.1    NEVH01002699    PNF41568.1    GBHO01005255    GBRD01000598    GDHC01008674    JAG38349.1    JAG65223.1    JAQ09955.1    PNF41573.1    GEZM01077309    JAV63332.1    CH940654    EDW57958.1    GDKW01001068    JAI55527.1    GAHY01000563    JAA76947.1    KB631641    ERL84900.1    KRF78050.1    KRF78051.1    KF813100    AHH35013.1    CP012523    ALC39250.1    GECL01001960    JAP04164.1    CM000158    EDW89933.1    GBBI01000815    JAC17897.1    CH477641    EAT37924.1    EAT37926.1    BT004839    AAO45195.1    GAMC01015562    GAMC01015561    JAB90993.1    CH916372    EDV98949.1    GEDC01017263    JAS20035.1    CM002910    KMY91349.1    CH480833    EDW46462.1    CH954179    EDV54434.1    AF202633    AE014134    AY314744    BT044501    AAF17587.1    AAF53995.1    AAN11121.1    AAN11122.1    AAP79432.1    ACH95275.1    KRJ98796.1    KRJ98797.1    KRJ98798.1    GFDG01000654    JAV18145.1    EZ422307    ADD18583.1    GAMC01015560    JAB90995.1    KMY91350.1    AGB93210.1    KQS61786.1    CH933807    EDW11967.1    CH964214    EDW80397.1    GBXI01005852    JAD08440.1    AAAB01008964    EAA12801.3    KRG03005.1    KRG03006.1    KRG03007.1    GDHF01015849    GDHF01014106    GDHF01013089    GDHF01004473    GDHF01001608    JAI36465.1    JAI38208.1    JAI39225.1    JAI47841.1    JAI50706.1    EFN66488.1    GAKP01015964    GAKP01015962    JAC42988.1    GBXI01016170    JAC98121.1    CH902620    EDV31871.1   
Pfam
PF00287   Na_K-ATPase
Interpro
IPR038702   Na/K_ATPase_sub_beta_sf        + More
IPR000402   Na/K_ATPase_sub_beta       
IPR036026   Seven-hairpin_glycosidases       
SUPFAM
SSF48225   SSF48225       
Gene 3D
PDB
4XE5     E-value=8.55679e-24,     Score=272

Ontologies

Topology

Length:
323
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.89501
Exp number, first 60 AAs:
13.43555
Total prob of N-in:
0.90235
POSSIBLE N-term signal
sequence
inside
1  -  46
TMhelix
47  -  69
outside
70  -  323
 
 

Population Genetic Test Statistics

Pi
178.237194
Theta
16.140636
Tajima's D
0.019599
CLR
1.291727
CSRT
0.382380880955952
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号