Gene
KWMTBOMO01637 Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006063
Annotation
PREDICTED:_lysosome-associated_membrane_glycoprotein_1-like_[Papilio_xuthus]
Location in the cell
Lysosomal Reliability : 1.124
Sequence
CDS
ATGCTGCATTTTAGATATTTTTACACAATCGTTGTGCTGTTCAGCTGTTGTAGAGCGGGTCATTTATCTGCTGGTGGCCTAGCTACAGAACTCATTGATGTACCTACATCTACGAAACCAACATCATTAGAAGATAAAATGACAACAGAGGCAATCACTACAGAGACAACCCCCAAGCCTGACACAACTACCAGCAGCACCACTACATCCACAACCTCTACTACTACATCTTCCACATCCACAACCTCCACTACCACACCTTCCACAACCACCACTACAGTATCTCCTAATACAACTAGTACAACTAACACAACCACAACTAAACCGTCTCCAACACCAACACCAGCACCCACTCCGGCTCCAGCACCCACTCCGGCCCCCGGTCCTCTTCCCTCACCAGACCAAGGAAACTGGACATATACAGATTCAGAGACCAACATAACCTGCATTGTTCTTAAGTTTGCAGCTCAATTCAATGTGACATATACCAAAGTTGACAACGTGTCATCCTTCGCTCACGTCGTCTTCAACGTACCGAGTAACGCTTCTGTGGTGAACGGCTCCTGTGCAGGCGACCAATGGCTCGAGATCAGCTGGTTGGCGCCCAACACCACCATTGCCAATAACATGACAATTTATTACCACAAGAACAAAACGACGAACAATTACTACCTCAAGAGTCTCAATGTGTCCTTCAGCCCAGAGCTGTTTGTAAATGCTTCTAAAGCAAATTCCCTGGAGCTTTACCATGGCAACGAATGGATGACCCCGGTGGCGACCTCGTACCGGTGTGAGGTCGCGACCCGCTTCAACATGAGCTCCGACAGCCTGACTGCCGCCTCGATGACCCTCACCCGGCTGCAGGAAGAGGCCTACAGGACTGCGCCCGGAACAGGATTCAGTGCCGCTCGCCAGTGCGGCGGCGCCGACGTGCCGGACGCCGTGCCCATAGCCGTGGGTTGCGCGCTGGGCGGGCTCGTGCTGGTCGTGCTGGTCGCCTACCTGGTCGCCCGCCGCCGCTCCGCCGCCAGCGGGTACCTCTCCATGTAG
Protein
MLHFRYFYTIVVLFSCCRAGHLSAGGLATELIDVPTSTKPTSLEDKMTTEAITTETTPKPDTTTSSTTTSTTSTTTSSTSTTSTTTPSTTTTTVSPNTTSTTNTTTTKPSPTPTPAPTPAPAPTPAPGPLPSPDQGNWTYTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGDQWLEISWLAPNTTIANNMTIYYHKNKTTNNYYLKSLNVSFSPELFVNASKANSLELYHGNEWMTPVATSYRCEVATRFNMSSDSLTAASMTLTRLQEEAYRTAPGTGFSAARQCGGADVPDAVPIAVGCALGGLVLVVLVAYLVARRRSAASGYLSM
Summary
Uniprot
ProteinModelPortal
Ontologies
PATHWAY
Topology
SignalP
Position: 1 - 19,
Likelihood: 0.869570
Length:
349
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.64981
Exp number, first 60 AAs:
0.80436
Total prob of N-in:
0.04785
outside
1 - 313
TMhelix
314 - 336
inside
337 - 349
Population Genetic Test Statistics
Pi
205.910769
Theta
160.481457
Tajima's D
0.198863
CLR
1.24714
CSRT
0.425828708564572
Interpretation
Uncertain
