Gene

KWMTBOMO01636

Pre Gene Modal

BGIBMGA006098

Annotation

PREDICTED:_laminin_subunit_alpha-2_[Bombyx_mori]

Location

Bomo_Chr4(+):759862-774102      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.395

CDS

ATGCTTTTACCACAGATTTCTGTATCACTGACCTCAAGTCCCGGAGCGCCTGCGGGTTGCTCCCGCGCTTTTCCTACCGATGGCGCGTCAGGTGCCGTCACACAGATCGCCATCGACGTGTCCTTCGACAATACTGTCAGAGACGGACCTCTCATACATTTGGTTGGCGAAATACAGAATGACGTAGAAACTTACATGAAACTGGTGGTGGAGAAGCAAAGGTTGAAGTTGACGTGGAACCTGGGGGGTGATGAAGGGCTGATTCTGCATCCTCAATTGCTCCAATCTACGCACGACGACGCCGATCATACGTCGTATAGAATCGAGATTGAAAGGATATGGAACGTTGTGGAGTTGCGCCTGGAGCAGGCCGGCGGGGCGGTGACGTCAGCGCGGAACAATAGCGCGCGGGGGGCGGCGCTGCGGGTGCGGGGGCTGTGGGCGGGGGACGCGGCGGGCGGGGGGCTGCCCGCCTGCGTGCACGCGCTGCGCAGTGCGGGCCGCCCGCTCGGCTTGTGGCGCGGTGTGGGCCAGCCTAAAGATGCCGCCTGCACCGGCTGTACGCACAGATGGATGAGTTCGGGGCGCGGCGACTCCATGACCTGGTTCGACGGGGCTGGTTACGTAGAGCTACGTCGCTCAAGACTGCGCCCCGTTGACAGAAGGCAATTCTCAATAGCATTCACCTTCCAAACGAGAGACGAAAATGCTTTATTATTTATGGCTACTGACATTGCCAATAATCGTTCAGTGTCAATAGTAATGCGTGAATGCCGAGTGTACTTTATAGTCGAGTACACAGGATCCAGGCTGGAACTGGTGGCCCCCGGACGCCACTGTGACGGGAGGCCGGCACATCTGCAGGCCATCAGGGCGTTTGCCGCAAATAATCTTGAGAAAGGCAGCCTGCGTGTTAACGGCGAGGAGCGGCTGGGCTCCCCCTCCCCGCCCGTGCACCTCCCCGCCGCGCTCCCCGACCTGTCCGCCGCGACGTATGCCGTGGGGGGTCTGCCGCCCGGACCCGCGGCCCCGGCGCCCCCCCTGCGCGGCTGTCTCGGAGCCCTGTCTATCGATAGAGAGGGCTACGACCTGCTGGACACTCCGACGAGACACGGGGTCGAGCCGAACTGTGGCGCCAGGACCATCCGCTCGGCTATATTCGAAGGCTCAGGCCACATCGAGCTGCCATCGCCCGTCTTCCGCCGTAAAGCAGCGCTGGGCATCTCCTTCAGGGCTCGTGCTCCAGACGGCCTGATTCTCTTCAGAGCGCCCTCCAATCTGTCGGCTAACGAAGTGGACGAAGATGGTGACGGACATTTTATTGTGTTGGCTCTTATTAAAGGTGAGCTTGAAGTGATCGCGTCTGCTGGGAAAAGTGAGCTAGTTCTGCGGACCAACGGGACCAGGTTCGATGATGGAATGCTCCACACTGTCCAAATCACCAGGATACATAAACAGCTGGAACTGTGGGTGGACGACGAGAGATTGTCGAGCGGTACGCTGCTTGGCAACGCGTTCCCATCCCGGCCGGGCGGTCTCTACCTGGCGGGTGTCGGACAGCCGGACAGCATGCGGATGTCACGGTTTCCTCTCGGACACTTCACCGGCACTCTCTCTGACGTCATTATCGATGCGCAATTGATCGGTCTTGAGAGCGCCTTGAACTGGAGTGGAGCCCAGCTCGGTCGCGAGGACAGCGAGCCCCGGATCCAGCCCAGAACCGAACCAAGAGCCTTGCAGTCGCAACAACAAGACAACGGGTGTACGAAAACGATGTCGTACACGGTGGAGGCGGGCGCCGTGAAGTTCGGCGACGGGCCGCACAGCCACGCCGTGCTCCGGCTGAAGAAGCGCGGCCGGGACATCGCGGTCACTCTGCAGCTCCGCACCTACGCCACCGAGGGACTGCTGCTGCTGGCCCCGGGTTCAAAAGCAAAACCGAAGCATTACATAGCAGTGATGCTGCGAGATGGAAAGCTGCGTCTCGTGATCCGCGGCAGGAAGAGGAAGGAGATAGCGTTGAACACCTTCGTATCGGACGGCACTTGGAGATCTCTCTCCATACGCTATGCGTCCGGCCGCGCCCACGTGAAGTGCGGCGGGGAGACGGGGGCGGGGCGCGGGGGGCGGGCGCACGTGGCCCCCCGCCTGTACGTGGGGGGGCTGCCCCCCTACAGCGACACGTCCGACTACACGCTGCCCAACAACATCGTCCGCGTGGGCGGGTTCGTGGGGTGCGTGCGGCGCGTGACGGTGGGGGGGCGCGCCGAGGACCTGGTGCGCGACAGCAGGACGCACCACCACGTCGGACAGTGCTTCCCCAACGTCGAACCGGCCGCCTACTTCTCTGGTGACGCATATGCATCTCTGCGGCACACGTGGGGGGCCGGGAGCGGGTCCGACTCGGTCACCGAGCTTCAGCTGCAGTTCAGGACCAGTGAACCCAACGGCGTGCTGTTCGCGGGAGGCGACTTCCTTCTAGAGATCAAGGACGCTACGGTGGTGCTGAGTCGCGGGGGCGAGGAGGAGGCGGGGTCGGGCGTGCGCGTGCAGGGCGGCGCCGCGCTGTGCGACGGGTCGTGGCACGCGGTGCGCGCCTGGCTGCACGCGCGGCCCGCGCTGGCGCTGGACGGGGCGCCGCGCGTGGACGGGCCCGCGCCCGCGCTGCTCGACATCGACGACTCCGCCCCGCAAACACCCACCGACTACTACATAGGAGGCTGGCCCGAAGGCGTAATGGAGTCTACGGAAGGCGGGAAGAATTTCAAGGGTTGCATCCGTGACGTCAGCATCGGAGGACACAAACGCGATTGGAACAAAATGGATACTTTGCATAATGTTCTACTCGACTCTTGTCCTGTGCAACAATGA

Protein

MLLPQISVSLTSSPGAPAGCSRAFPTDGASGAVTQIAIDVSFDNTVRDGPLIHLVGEIQNDVETYMKLVVEKQRLKLTWNLGGDEGLILHPQLLQSTHDDADHTSYRIEIERIWNVVELRLEQAGGAVTSARNNSARGAALRVRGLWAGDAAGGGLPACVHALRSAGRPLGLWRGVGQPKDAACTGCTHRWMSSGRGDSMTWFDGAGYVELRRSRLRPVDRRQFSIAFTFQTRDENALLFMATDIANNRSVSIVMRECRVYFIVEYTGSRLELVAPGRHCDGRPAHLQAIRAFAANNLEKGSLRVNGEERLGSPSPPVHLPAALPDLSAATYAVGGLPPGPAAPAPPLRGCLGALSIDREGYDLLDTPTRHGVEPNCGARTIRSAIFEGSGHIELPSPVFRRKAALGISFRARAPDGLILFRAPSNLSANEVDEDGDGHFIVLALIKGELEVIASAGKSELVLRTNGTRFDDGMLHTVQITRIHKQLELWVDDERLSSGTLLGNAFPSRPGGLYLAGVGQPDSMRMSRFPLGHFTGTLSDVIIDAQLIGLESALNWSGAQLGREDSEPRIQPRTEPRALQSQQQDNGCTKTMSYTVEAGAVKFGDGPHSHAVLRLKKRGRDIAVTLQLRTYATEGLLLLAPGSKAKPKHYIAVMLRDGKLRLVIRGRKRKEIALNTFVSDGTWRSLSIRYASGRAHVKCGGETGAGRGGRAHVAPRLYVGGLPPYSDTSDYTLPNNIVRVGGFVGCVRRVTVGGRAEDLVRDSRTHHHVGQCFPNVEPAAYFSGDAYASLRHTWGAGSGSDSVTELQLQFRTSEPNGVLFAGGDFLLEIKDATVVLSRGGEEEAGSGVRVQGGAALCDGSWHAVRAWLHARPALALDGAPRVDGPAPALLDIDDSAPQTPTDYYIGGWPEGVMESTEGGKNFKGCIRDVSIGGHKRDWNKMDTLHNVLLDSCPVQQ

Uniprot

H9J9A6   A0A212F7X1   A0A2A4K1E0   A0A0L7KKJ8   A0A1W4UIP3   A0A1W4UWG4   + More
B4JD84   M9MRU0   Q9XZC9   A0A0R1DTV1   A0A0Q5WAC0   B4HXF7   A0A0R3NUR5   Q8IP51   A0A0K8U613   A0A034VHH3   B3N9T6   A0A0J9TN74   B4P0J7   Q29KB2   B4GX61   A0A0A1WTT8   A0A0Q9WBC6   W4VRF0   A0A1I8N4J4   A0A0K8ULP0   A0A0A1X1L6   B4M8R6   B4MVL9   A0A0M4ED39   A0A348G672   A0A1A9W0D5   A0A1I8PYT7   B3MMR4   A0A1A9UCK6   A0A1A9YRJ6   A0A1B0BIW7   E2AEL5   B4KEJ3   A0A0A9YKQ2   A0A2S2NGJ3   A0A1B0AJK3   A0A0A9YNV9   A0A026WQP9   B0WC10   A0A2A3EL97   A0A1B0D2T8   A0A088AQK7   K7J1L9   W8BVD1   A0A3B0KA09   A0A1B0FLF3   A0A154NX62   E2C7R2   A0A2S2NEP0   T1HX12   Q17L45   A0A1J1I025   A0A2H8TJH9   A0A158NNY9   A0A182H6W1   A0A151IWU9   J9JUN1   A0A195BRX4   A0A195EW19   A0A151I9M8   A0A182TZ14   A0A067RR33   A0A182YPN7   F4WV88   A0A182JXQ3   A0A182NLL6   A0A182WTH0   A0A182VN22   A0A182IEL7   A0A2J7PTP7   A0A182P0I4   A0A2J7PTN9   A0A1S4GX69   A0A151WKC6   A0A182QTT0   A0A1B6E8Y1   A0A1B6D6B4   A0A182MRI4   A0A084W3W6   A0A1Q3FD61   A0A182R3A3   Q5TQ35   A0A182W9X9   W5J9N1   A0A0C9RDR8   A0A182F607   E9IHA0   A0A0J7L3B7   A0A182ISI8  

Pubmed

19121390    22118469    26227816    17994087    10731132    12537568    + More
12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    10189378    17550304    15632085    25348373    22936249    25830018    25315136    20798317    25401762    24508170    20075255    24495485    17510324    21347285    26483478    24845553    25244985    21719571    12364791    24438588    20920257    23761445    21282665   

EMBL

BABH01004370    BABH01004371    AGBW02009824    OWR49818.1    NWSH01000323    PCG77480.1    + More
JTDY01009374    KOB63596.1    CH916368    EDW03257.1    AE014134    ADV37056.1    ADV37057.1    ADV37058.1    ADV37059.1    AF135118    AAD31714.1    CM000157    KRJ98118.1    CH954177    KQS70448.1    CH480818    EDW51737.1    CH379061    KRT04866.1    AAN10875.1    GDHF01030313    JAI22001.1    GAKP01017934    JAC41018.1    EDV58581.1    CM002910    KMY90230.1    EDW88991.2    EAL33263.2    CH479195    EDW27388.1    GBXI01012362    JAD01930.1    CH940654    KRF77829.1    GANO01003768    JAB56103.1    GDHF01025064    JAI27250.1    GBXI01009637    JAD04655.1    EDW57592.1    CH963857    EDW75739.1    CP012523    ALC39660.1    FX985614    BBF97945.1    CH902620    EDV31955.2    JXJN01015200    GL438870    EFN68138.1    CH933807    EDW11872.2    GBHO01010820    JAG32784.1    GGMR01003695    MBY16314.1    GBHO01010816    JAG32788.1    KK107128    EZA58355.1    DS231884    EDS43070.1    KZ288227    PBC31801.1    AJVK01002820    AJVK01002821    GAMC01009289    JAB97266.1    OUUW01000006    SPP82486.1    CCAG010017313    KQ434777    KZC04266.1    GL453395    EFN76045.1    GGMR01003021    MBY15640.1    ACPB03001553    CH477219    EAT47381.1    CVRI01000037    CRK93563.1    GFXV01002027    MBW13832.1    ADTU01021838    ADTU01021839    ADTU01021840    ADTU01021841    ADTU01021842    ADTU01021843    ADTU01021844    ADTU01021845    ADTU01021846    ADTU01021847    JXUM01027575    JXUM01027576    JXUM01027577    JXUM01027578    JXUM01027579    JXUM01027580    KQ560794    KXJ80870.1    KQ980843    KYN12309.1    ABLF02022257    KQ976417    KYM89765.1    KQ981953    KYN32433.1    KQ978303    KYM95330.1    KK852514    KDR22194.1    GL888384    EGI61854.1    APCN01005209    NEVH01021233    PNF19694.1    PNF19695.1    AAAB01008964    KQ983031    KYQ48135.1    AXCN02000611    GEDC01002922    JAS34376.1    GEDC01016112    JAS21186.1    AXCM01001077    ATLV01020177    ATLV01020178    ATLV01020179    ATLV01020180    ATLV01020181    ATLV01020182    ATLV01020183    ATLV01020184    ATLV01020185    ATLV01020186    KE525295    KFB44910.1    GFDL01009607    JAV25438.1    EAL39720.3    ADMH02002080    ETN59454.1    GBYB01014709    JAG84476.1    GL763196    EFZ20055.1    LBMM01000962    KMQ97151.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000037510    UP000192221    UP000001070    + More
UP000000803    UP000002282    UP000008711    UP000001292    UP000001819    UP000008744    UP000008792    UP000095301    UP000007798    UP000092553    UP000091820    UP000095300    UP000007801    UP000078200    UP000092443    UP000092460    UP000000311    UP000009192    UP000092445    UP000053097    UP000002320    UP000242457    UP000092462    UP000005203    UP000002358    UP000268350    UP000092444    UP000076502    UP000008237    UP000015103    UP000008820    UP000183832    UP000005205    UP000069940    UP000249989    UP000078492    UP000007819    UP000078540    UP000078541    UP000078542    UP000075902    UP000027135    UP000076408    UP000007755    UP000075881    UP000075884    UP000076407    UP000075903    UP000075840    UP000235965    UP000075885    UP000075809    UP000075886    UP000075883    UP000030765    UP000075900    UP000007062    UP000075920    UP000000673    UP000069272    UP000036403    UP000075880   

PRIDE

H9J9A6    Q9XZC9    Q8IP51   

Pfam

PF00054   Laminin_G_1        + More
PF02210   Laminin_G_2
PF00053   Laminin_EGF
PF00052   Laminin_B
PF00055   Laminin_N
PF06008   Laminin_I

Interpro

IPR013320   ConA-like_dom_sf        + More
IPR001791   Laminin_G       
IPR000034   Laminin_IV       
IPR002049   Laminin_EGF       
IPR000742   EGF-like_dom       
IPR013032   EGF-like_CS       
IPR038684   Laminin_N_sf       
IPR008211   Laminin_N       
IPR009254   Laminin_aI       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR008979   Galactose-bd-like_sf       
IPR011641   Tyr-kin_ephrin_A/B_rcpt-like       

SUPFAM

SSF49899   SSF49899        + More
SSF57184   SSF57184       
SSF49785   SSF49785       

Gene 3D

2.60.120.1490    

ProteinModelPortal

H9J9A6   A0A212F7X1   A0A2A4K1E0   A0A0L7KKJ8   A0A1W4UIP3   A0A1W4UWG4   + More
B4JD84   M9MRU0   Q9XZC9   A0A0R1DTV1   A0A0Q5WAC0   B4HXF7   A0A0R3NUR5   Q8IP51   A0A0K8U613   A0A034VHH3   B3N9T6   A0A0J9TN74   B4P0J7   Q29KB2   B4GX61   A0A0A1WTT8   A0A0Q9WBC6   W4VRF0   A0A1I8N4J4   A0A0K8ULP0   A0A0A1X1L6   B4M8R6   B4MVL9   A0A0M4ED39   A0A348G672   A0A1A9W0D5   A0A1I8PYT7   B3MMR4   A0A1A9UCK6   A0A1A9YRJ6   A0A1B0BIW7   E2AEL5   B4KEJ3   A0A0A9YKQ2   A0A2S2NGJ3   A0A1B0AJK3   A0A0A9YNV9   A0A026WQP9   B0WC10   A0A2A3EL97   A0A1B0D2T8   A0A088AQK7   K7J1L9   W8BVD1   A0A3B0KA09   A0A1B0FLF3   A0A154NX62   E2C7R2   A0A2S2NEP0   T1HX12   Q17L45   A0A1J1I025   A0A2H8TJH9   A0A158NNY9   A0A182H6W1   A0A151IWU9   J9JUN1   A0A195BRX4   A0A195EW19   A0A151I9M8   A0A182TZ14   A0A067RR33   A0A182YPN7   F4WV88   A0A182JXQ3   A0A182NLL6   A0A182WTH0   A0A182VN22   A0A182IEL7   A0A2J7PTP7   A0A182P0I4   A0A2J7PTN9   A0A1S4GX69   A0A151WKC6   A0A182QTT0   A0A1B6E8Y1   A0A1B6D6B4   A0A182MRI4   A0A084W3W6   A0A1Q3FD61   A0A182R3A3   Q5TQ35   A0A182W9X9   W5J9N1   A0A0C9RDR8   A0A182F607   E9IHA0   A0A0J7L3B7   A0A182ISI8  

PDB

2JD4     E-value=7.97591e-18,     Score=225

KEGG

101746347    K05637 laminin, alpha 1/2 | (RefSeq) laminin subunit alpha-2

PATHWAY

04512    ECM-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0008406   GO:0005604   GO:0007502   GO:0005102   GO:0030155   GO:0045995   GO:0030334   GO:0016021   GO:0008045   GO:0016358   GO:0009888   GO:0009887  

Length:

956

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00173

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00008

outside

1  -  956

 

 

Pi

201.666612

Theta

171.914412

Tajima's D

1.037888

CLR

0.427165

CSRT

0.667166641667917

Interpretation

Uncertain