Gene

KWMTBOMO01635

Pre Gene Modal

BGIBMGA006097

Annotation

PREDICTED:_laminin_subunit_alpha-2_[Bombyx_mori]

Location

Bomo_Chr4(+):744952-758676      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.739 Nuclear   Reliability : 2.322

CDS

ATGATTGAGACAAGTGATCCCAGCCTGCACCGCTTCAACACATTACGTATCACACGTTGCAATTGTTCCTCAATCGGTGCTGAAGGCAACTCGTGCGACATACGAACGGGCCAGTGCCGCTGTAAGTCCCACGTCACCGGCAGAGCCTGCGATGTGTGTGACGAAGGCTACTGGGGCTTGGACAGAGGTGGCTGCAGACGGTGCGAGTGTGGGTCTGGCGCTTCGTCATGCGACCCCGTGACGGGAGTCTGCGCCTGTGCCACGGGGGTCGGCGGAGTGCAATGCGACCGATGCTTACCTGGATACTACGGCTTTGGACCTGCCGGGTGTTTGCTTTGTCCCGTTTGCTCGGAAGGAAAAGTTTGCTCTCCGACTAGTGGTCGTTGCGTGTGCCCCGGAGGGTCGTTGGGCCCGGGCTGTAAACAGTGCGCGCGTGGGTACTGGGCCACGTCGCCAGGACACTGCCGGCCCTGCGCTTGCGGACAAGGAGCTCTAAACAATAACTGTAATCCACAAAGTGGGCAGTGCAAGTGCAGACCTGGCTGGGCTGGGCTCGTATGCGACGTATGCGCGTTCGGACACCACGGACCCAAATGCAAGCCGTGCGACTGCAACCTCGCTGGCTCGAAGGGCTGCAGCTCGGACTTGTGCCCTTGCGATAACCGGGGAAGATGTAATTGCAAGGAGAACGTTGTGGGGGAGAAGTGCGAGAAGTGCCTCGAAGGCACGTTCGGTCTGGCCGCGGAGAACCCCGTCGGCTGCACGGCTTGCTTCTGCTTCGGTCGCGCGGCGCAGTGCTCACAGGCGGAGCTGGCGCGGGCCGCCGTGCACGCGGCCTCGCCCCTACACATAGAGCTGCAACGATCCAAAGACAATACTGCTATCACCACCATGGACCAAGATTCTCTCTTAGCGATTCACACGCACTCGCCCGAAGCCACCATCAGCCTGCCATGGCCACCGGCTCCGGTCTACGTGGAACTCGACAAGCGCTTCCTTGGGGATCGAGTGACATCGTACGGTGGACTCATCAAGTTTCGAATAGAGCAGGAGGGGGGAGTGGAACTAGATCCAGAAGTAAAGGCCAAGTTTCCATTGGTCAGGATATATGGAAAGAACATTGTGCTGGACCATTACGAGCACGTGCCTCCTTTAAACGGGAGTTACTCGATCCGTCTCCACGAGTCGCTCTGGTGGGTCCGCGGCCACAACGCGCAGAGCTCCCGCGCCGCGCTTATGCTGGCGCTGCAGAGGGTCGACAGGATCCTGCTGAGGGTCACCACCAGAGCGCCCAGATATGATGAACACGTCCATGCTTTGCTATTAAACGTGTCTCTAGACACAGCCATTCCGGGCCTGAGTCGCTCAGCCCCAGCGTTAGGGGTTGAGATCTGCGCGTGCCCTCGCGGCTACTCCGCCTCATCGTGCCAAGAACCAGACATAGGCTTCTGGATGCCACCACCGAGGGTCCACTTGTCTACCGTGAAGGGAACCATCGTTATCAGCCTGGAAGGAGAAGCGCAGCCTTGTCATTGTCATAACAGAGCTACGAAGTGCGATCCAGAAACTGGATATTGCTTGAACTGCACAGCTGGTACAGGTGGGCCCCGCTGCTCGGTGTGTGCGGCAGGATTCTACGGCAACCCCAGCGCTCCTGCCGGCTGTCAGCCCTGCCCTTGCCCTTCCAGGGGCAAGAATTTCGCGTCTGGTTGTAACGTTGCAATGGGCAGAGTGCAATGCCTCTGCAAACCAGGCTACAGCGGGCCGCGATGCGAGTCGTGCGCCGTGGGGTACCGGCGCGACGCGGCGGGCGGGTGCGCACGCTGTACGTGCGGGCGCGGCGCCGTGTCGCGGTGGTGTGACGCACACGACACGTGTCGGTGCCGGGACTACGCCACCGGGCCCACGTGCGACACCTGCCTCGCCCCCAGGACTTACATGGACACCGATGGATGCATGCCATGTGACAACTGCACTCAGACATTATTGGACTCAATTGAAGAAGCCTCGTCGAATTTACGCAAAAATGCCAATCCGGCCGAATTAAAGCGCATCCCCAAACCATTCCCGGCTTTAAGAGAGTTCGCACGCAATACTACAATCCTAAAAACCGCCTATGATTCTTTAAAGAAATACCTAGAAAACGTTTCAGGACTAGATAATTCGATCGCGAATTTAGAAGCAACAGAACACAGACTGTTTACAGAAGCGAATCGATTAAAGTCGGAAGCTTCTAGACGGTCAGCAGAAGGAGACTACCTGAGCTTAGAGAGCGTTAGCGCTTTGGAGGATGTGCTGCAATTGAGGAGGAGGTTGGGCGAGCTGGTGGAGGACCTGGATGAGTTCGCGAGAGGGGAAAAGCATTTAAGTGCTCACCGAGCACTGAAGGAAGCGAGACAGCTTTTAAAAGAAATCAGGAATGTTCAGCTTACTGATTTCACCGCTTCGGTTAATGATGTTTTTGATATGGCGAACCTTCAGACGACATCACTCAAAGAATATAAATATCGAATCGATGATACGTATAAGCGGGTGAAGAAACTCGGTGAAGCGCTGACCGAGTGGGAGCGGAAAGCAGCTGACCTCCACCGTCTGGGCCAGGCGATGTGGGACGCCGGCGACCAGCTTGTTCAGCTTCAGGAGAAGGTGAAGCCGAGACTTGCTGCGGTCAGAGATATCGGACTCAGATGTCGACTGATACTTGAAGACATAAACTCCCTATCCACAAACAACTTTACCGACGCAATCGGAGCCATCCTGCTTCAATCTCAGACCCTCGCAATCAAGTTTCCCAGCATCGACGCGGAGCTAAAGGTGCTCACCCTTGCTGCTGAGGAGAAGGAGGGCATCCTATATAGTCTAACACCAGCTTACAGGCAGAAGTACTTGGAACCGGTCGAGAAACACGTCAAGCAGTTGGCCGAGAAAGCTATCGAATATAAAAATCTATTTGCGGGAAGTCGCGCCGCAGCTTCCCTGGGCGTGTCGGCAGCGCAGGCCTGGTCCCGGGTGGCCTCCCTAGTCCAGGAAGCCAGTGAGGCAGCAGAGGAGGCGACTAGAGCAGCCGCAGCCGCCTCCAGTCTCGCTCGCGGCTCAGAACCCATGCTGCAACTCGCCGGAAAGGGGAAGAACAGTTCTGAAGATCTAAAGATGAGAGGAGCCGCTGTGTTGGCCAGAGCTGAAGCCCTAGGCGTAGAGTTGGAAGGCTTAGCCCACGCCACGGACGCGACCAGCGTGACGGTGCGCGGCGCGGCGTGGCGCGTCAGGTCGCTGGGCGCTCGGCCGGAGGCGCGCGTGCTGCCCGTGCTGGAGGCCGCCAGCGCCGCGGCCGACAGACTGTTCCTCACCACGCGAGCCCTGTACGACGAGGCCAGCGATGTCAGGCGGCTCATACGGTATCACATAAGGAAGCAGCTAGCTGAACTACAGCGTCACGGCGACACCGCGCTAGGAGCCGCTCAGGAACACGGTAAATACTGTTCATGTTTCTATTAA

Protein

MIETSDPSLHRFNTLRITRCNCSSIGAEGNSCDIRTGQCRCKSHVTGRACDVCDEGYWGLDRGGCRRCECGSGASSCDPVTGVCACATGVGGVQCDRCLPGYYGFGPAGCLLCPVCSEGKVCSPTSGRCVCPGGSLGPGCKQCARGYWATSPGHCRPCACGQGALNNNCNPQSGQCKCRPGWAGLVCDVCAFGHHGPKCKPCDCNLAGSKGCSSDLCPCDNRGRCNCKENVVGEKCEKCLEGTFGLAAENPVGCTACFCFGRAAQCSQAELARAAVHAASPLHIELQRSKDNTAITTMDQDSLLAIHTHSPEATISLPWPPAPVYVELDKRFLGDRVTSYGGLIKFRIEQEGGVELDPEVKAKFPLVRIYGKNIVLDHYEHVPPLNGSYSIRLHESLWWVRGHNAQSSRAALMLALQRVDRILLRVTTRAPRYDEHVHALLLNVSLDTAIPGLSRSAPALGVEICACPRGYSASSCQEPDIGFWMPPPRVHLSTVKGTIVISLEGEAQPCHCHNRATKCDPETGYCLNCTAGTGGPRCSVCAAGFYGNPSAPAGCQPCPCPSRGKNFASGCNVAMGRVQCLCKPGYSGPRCESCAVGYRRDAAGGCARCTCGRGAVSRWCDAHDTCRCRDYATGPTCDTCLAPRTYMDTDGCMPCDNCTQTLLDSIEEASSNLRKNANPAELKRIPKPFPALREFARNTTILKTAYDSLKKYLENVSGLDNSIANLEATEHRLFTEANRLKSEASRRSAEGDYLSLESVSALEDVLQLRRRLGELVEDLDEFARGEKHLSAHRALKEARQLLKEIRNVQLTDFTASVNDVFDMANLQTTSLKEYKYRIDDTYKRVKKLGEALTEWERKAADLHRLGQAMWDAGDQLVQLQEKVKPRLAAVRDIGLRCRLILEDINSLSTNNFTDAIGAILLQSQTLAIKFPSIDAELKVLTLAAEEKEGILYSLTPAYRQKYLEPVEKHVKQLAEKAIEYKNLFAGSRAAASLGVSAAQAWSRVASLVQEASEAAEEATRAAAAASSLARGSEPMLQLAGKGKNSSEDLKMRGAAVLARAEALGVELEGLAHATDATSVTVRGAAWRVRSLGARPEARVLPVLEAASAAADRLFLTTRALYDEASDVRRLIRYHIRKQLAELQRHGDTALGAAQEHGKYCSCFY

Uniprot

A0A2A4K1E0   A0A2H1WIA6   A0A0L7KKJ8   A0A194R7R6   A0A194Q0F2   A0A212F7X1   + More
A0A154NX62   A0A0A1WTT8   A0A0L7RKD9   A0A0A1X1L6   A0A0K8VNT6   A0A195EW19   A0A0C9QIZ5   A0A151WKC6   A0A151I9M8   A0A0K8ULP0   A0A195BRX4   E2C7R2   A0A158NNY9   A0A088AQK7   E0VR70   F4WV88   A0A0C9RDR8   A0A151IWU9   A0A1Y1MEI0   A0A0M4ED39   Q9XZC9   R9PY40   Q8IP51   M9MRU0   A0A1I8N4J4   A0A1W4UWG4   A0A1W4UIP3   A0A1W4UXV6   A0A0J9TN74   B4HXF7   B4JD84   B4P0J7   A0A0R1DLB2   A0A0R1DTV1   B4KEJ3   E2AEL5   B3N9T6   A0A0Q5WAC0   A0A2P2I808   A0A084W3W6   A0A182ISI8   A0A182YPN7   A0A1B0FLF3   A0A182WTH0   A0A182VN22   A0A182JXQ3   A0A0T6AZ19   Q5TQ35   A0A3Q0JH22   W4VRF0   A0A1S4GWE4   A0A1S4GX69   A0A182IEL7   A0A336KVA8   A0A182W9X9   A0A0J7L3B7   A0A182P0I4   A0A182NLL6   A0A182R3A3   A0A182QTT0   A0A182MRI4   Q17L45   E9G3G9   A0A3L8DMM6   A0A1B0ET91   A0A182F607   A0A2A3EL97   A0A0K2T8T8   A0A2M4CM78   T1J8M8   W5J9N1   A0A348G672   A0A182L2C6   T1HX12   A0A2D5MDF7   V5HWF9   A0A131Y916   T1K906   A0A085NH32   A0A085MGE7   A0A1V9XTV5   A0A1W0X8A9   A0A1W0X8M5   A0A0V1D9U6   A0A0V1A4B5   A0A0V0U7Z0   A0A0V0U7F3   A0A0V1A4S5   A0A0V0S3S9   A0A0V1BAN4   A0A0V1BAK6   A0A0V0S3U8  

Pubmed

26227816    26354079    22118469    25830018    20798317    21347285    + More
20566863    21719571    28004739    10189378    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25315136    22936249    17994087    17550304    24438588    25244985    12364791    17510324    21292972    30249741    20920257    23761445    20966253    29337314    25765539    24929829    28327890   

EMBL

NWSH01000323    PCG77480.1    ODYU01008757    SOQ52632.1    JTDY01009374    KOB63596.1    + More
KQ460644    KPJ13280.1    KQ459584    KPI98474.1    AGBW02009824    OWR49818.1    KQ434777    KZC04266.1    GBXI01012362    JAD01930.1    KQ414578    KOC71211.1    GBXI01009637    JAD04655.1    GDHF01011768    JAI40546.1    KQ981953    KYN32433.1    GBYB01014708    JAG84475.1    KQ983031    KYQ48135.1    KQ978303    KYM95330.1    GDHF01025064    JAI27250.1    KQ976417    KYM89765.1    GL453395    EFN76045.1    ADTU01021838    ADTU01021839    ADTU01021840    ADTU01021841    ADTU01021842    ADTU01021843    ADTU01021844    ADTU01021845    ADTU01021846    ADTU01021847    DS235459    EEB15876.1    GL888384    EGI61854.1    GBYB01014709    JAG84476.1    KQ980843    KYN12309.1    GEZM01035053    JAV83418.1    CP012523    ALC39660.1    AF135118    AAD31714.1    AE014134    AAF53381.3    AAN10875.1    ADV37056.1    ADV37057.1    ADV37058.1    ADV37059.1    CM002910    KMY90230.1    CH480818    EDW51737.1    CH916368    EDW03257.1    CM000157    EDW88991.2    KRJ98117.1    KRJ98118.1    CH933807    EDW11872.2    GL438870    EFN68138.1    CH954177    EDV58581.1    KQS70448.1    IACF01004559    LAB70148.1    ATLV01020177    ATLV01020178    ATLV01020179    ATLV01020180    ATLV01020181    ATLV01020182    ATLV01020183    ATLV01020184    ATLV01020185    ATLV01020186    KE525295    KFB44910.1    CCAG010017313    LJIG01022485    KRT80328.1    AAAB01008964    EAL39720.3    GANO01003768    JAB56103.1    APCN01005209    UFQS01001005    UFQT01001005    SSX08498.1    SSX28414.1    LBMM01000962    KMQ97151.1    AXCN02000611    AXCM01001077    CH477219    EAT47381.1    GL732531    EFX85991.1    QOIP01000006    RLU21684.1    AJWK01006588    AJWK01006589    KZ288227    PBC31801.1    HACA01004504    HACA01004505    CDW21866.1    GGFL01002123    MBW66301.1    JH431957    ADMH02002080    ETN59454.1    FX985614    BBF97945.1    ACPB03001553    NYWD01000097    MAD20207.1    GANP01003781    JAB80687.1    GEFM01000439    JAP75357.1    CAEY01001886    KL367501    KFD68778.1    KL363194    KFD56293.1    MNPL01004172    OQR76919.1    MTYJ01000010    OQV23620.1    OQV23621.1    JYDI01000023    KRY58196.1    JYDQ01000034    KRY19601.1    JYDJ01000045    KRX47243.1    KRX47244.1    KRY19604.1    JYDL01000040    KRX21352.1    JYDH01000073    KRY34043.1    KRY34042.1    KRX21353.1   

Proteomes

UP000218220    UP000037510    UP000053240    UP000053268    UP000007151    UP000076502    + More
UP000053825    UP000078541    UP000075809    UP000078542    UP000078540    UP000008237    UP000005205    UP000005203    UP000009046    UP000007755    UP000078492    UP000092553    UP000000803    UP000095301    UP000192221    UP000001292    UP000001070    UP000002282    UP000009192    UP000000311    UP000008711    UP000030765    UP000075880    UP000076408    UP000092444    UP000076407    UP000075903    UP000075881    UP000007062    UP000079169    UP000075840    UP000075920    UP000036403    UP000075885    UP000075884    UP000075900    UP000075886    UP000075883    UP000008820    UP000000305    UP000279307    UP000092461    UP000069272    UP000242457    UP000000673    UP000075882    UP000015103    UP000015104    UP000192247    UP000054653    UP000054783    UP000055048    UP000054630    UP000054776   

PRIDE

Q9XZC9    Q8IP51   

Pfam

PF00052   Laminin_B        + More
PF00054   Laminin_G_1
PF00053   Laminin_EGF
PF02210   Laminin_G_2
PF00055   Laminin_N
PF06008   Laminin_I

Interpro

IPR002049   Laminin_EGF        + More
IPR000034   Laminin_IV       
IPR013320   ConA-like_dom_sf       
IPR000742   EGF-like_dom       
IPR001791   Laminin_G       
IPR013032   EGF-like_CS       
IPR008211   Laminin_N       
IPR038684   Laminin_N_sf       
IPR008979   Galactose-bd-like_sf       
IPR009254   Laminin_aI       
IPR009030   Growth_fac_rcpt_cys_sf       

SUPFAM

SSF49899   SSF49899        + More
SSF49785   SSF49785       
SSF57184   SSF57184       

Gene 3D

2.60.120.1490    

ProteinModelPortal

A0A2A4K1E0   A0A2H1WIA6   A0A0L7KKJ8   A0A194R7R6   A0A194Q0F2   A0A212F7X1   + More
A0A154NX62   A0A0A1WTT8   A0A0L7RKD9   A0A0A1X1L6   A0A0K8VNT6   A0A195EW19   A0A0C9QIZ5   A0A151WKC6   A0A151I9M8   A0A0K8ULP0   A0A195BRX4   E2C7R2   A0A158NNY9   A0A088AQK7   E0VR70   F4WV88   A0A0C9RDR8   A0A151IWU9   A0A1Y1MEI0   A0A0M4ED39   Q9XZC9   R9PY40   Q8IP51   M9MRU0   A0A1I8N4J4   A0A1W4UWG4   A0A1W4UIP3   A0A1W4UXV6   A0A0J9TN74   B4HXF7   B4JD84   B4P0J7   A0A0R1DLB2   A0A0R1DTV1   B4KEJ3   E2AEL5   B3N9T6   A0A0Q5WAC0   A0A2P2I808   A0A084W3W6   A0A182ISI8   A0A182YPN7   A0A1B0FLF3   A0A182WTH0   A0A182VN22   A0A182JXQ3   A0A0T6AZ19   Q5TQ35   A0A3Q0JH22   W4VRF0   A0A1S4GWE4   A0A1S4GX69   A0A182IEL7   A0A336KVA8   A0A182W9X9   A0A0J7L3B7   A0A182P0I4   A0A182NLL6   A0A182R3A3   A0A182QTT0   A0A182MRI4   Q17L45   E9G3G9   A0A3L8DMM6   A0A1B0ET91   A0A182F607   A0A2A3EL97   A0A0K2T8T8   A0A2M4CM78   T1J8M8   W5J9N1   A0A348G672   A0A182L2C6   T1HX12   A0A2D5MDF7   V5HWF9   A0A131Y916   T1K906   A0A085NH32   A0A085MGE7   A0A1V9XTV5   A0A1W0X8A9   A0A1W0X8M5   A0A0V1D9U6   A0A0V1A4B5   A0A0V0U7Z0   A0A0V0U7F3   A0A0V1A4S5   A0A0V0S3S9   A0A0V1BAN4   A0A0V1BAK6   A0A0V0S3U8  

PDB

4AQS     E-value=4.33158e-10,     Score=160

KEGG

101746347    K05637 laminin, alpha 1/2 | (RefSeq) laminin subunit alpha-2

GO

GO:0030334   GO:0045995   GO:0030155   GO:0005102   GO:0008406   GO:0005604   GO:0007502   GO:0008045   GO:0016358   GO:0009888   GO:0009887   GO:0007411   GO:0016021   GO:0005515   GO:0003824   GO:0004190   GO:0006508   GO:0006811   GO:0016020   GO:0003779  

Length:

1164

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00139

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00004

outside

1  -  1164

 

 

Pi

24.632969

Theta

180.51827

Tajima's D

0.804654

CLR

0.428065

CSRT

0.606269686515674

Interpretation

Uncertain