Gene

KWMTBOMO01632

Pre Gene Modal

BGIBMGA006095

Annotation

PREDICTED:_laminin_subunit_alpha-2_[Bombyx_mori]

Location

Bomo_Chr4(+):661532-696131      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.283 Nuclear   Reliability : 1.238 PlasmaMembrane   Reliability : 1.5

CDS

ATGCTCCAATCCAATATTCGCCTCGTGTTAATTGAACATTATGCAATTTGGTTTGTCGTAGGCCGGGCGGTGCTGGACCGGCTCGCGAGCACGACCGTGAGTGATGTGGACACGGTCACGAGCGCAGCGGTTAGCGGCTTGTTGCCCGCTCCGCTAGACGTCGCGCCGTACTCTGTGATCGCGGCCAATGCGACTTGCGGAGAAGATGGAGAAGAAGAATATTGTCGGGACACGCCGGGAAAGCGTGGAACCGTCTGTGATATCTGCGAGGGTCCGGACGGCTCGTCTTTCCGCAGACATCCGCCATCACACGCACTGGACGGAGACACTTCAACTTGGTGGCAAAGTCCTACATTGGCTGCAGGCGAGCAGTATAAACACGTCGAGTTAATCACAACTTTGCCAGACAAAATGGAACTGCTCCACGTCATCATTAAGTCAGGTCCGTCACCTCGACCCTTGGCCTGGTCGCTCGAGGTATCCGCATCGGAAAGCGGCGAAGACTGGCGCATGATCCGAGCGTATGGAGACAAAGACCACTGCAAGAAAATTTGGGATTTGCGACCAGAGCGACGGAGGAGGAAAGCTAGGGCGGCAAAGAGAATTAATAGAGCTCATAAAATTAGTTGTTCTACACAATTTGCTAATTATAAACCATTAGAAAATGGAGAGATGCATGTGGCTGTCGGCGAAGGAGTATCAGCTCGAAGAGTTCGTATATCGTTTCGCGGCGCTCACCCGACTCCGTCTCGGCAGCAGTACTACACCGTGCGATCCCTGACGTTGGCGGCGAGATGCTTGTGCCATGGACACGCCCAGCGATGTGCTGTCGATAATAAAGGTGCGAAATGCGAATGCTTGCATGCTACGTGTGGATCTCATTGCCATCGATGCTGTTCTGGTGGATCTTGGGCTCCACACAAAATCTGTGATGAGACGCTGGAGTGCCTCTGCGGAGAACGGGGACAGTGCTCTTTCGATGACACTGGCGCTACTCTGTGTCTTAACTGTACGGAAAATCGTGGTGGACCATCATGCGACAAATGTTTATTCGGATATTACAATACGGTGTCGGACGGGCCCTGCGTGCCCTGTGACTGTGACCCTGAAGGATCTGATGGTTCCTGCGAATGGGACAATAAGCGTCACCGAGTATCGTGCAACTGTCTTCCTGGCTTCACCGGTCACCTCTGCGACTCCTGCGAGTCCTCGAACGCTGTTTTTCCTTTATGCCATGACATCCCCACCGAACCGCCGTGCAAATGTGACGTCAGAGGCATCGTGGATCCCACAAGAGAGTGCGATGAAGTCTGTGAATGTAAACTCAACGTGATAGGAGAGCGATGCGACACGTGCGCTTCTGGACACTTTGGGCTCAGCTCTGACCTGAGGGAAGGTTGCAGACCATGCTATTGTTCACACGTTACAGACATCTGCGAGCTCGCTGCACCAGACCCCAACACCCCTCATGATATAGTCCTGCCGCTGGGCGAAGCGTGGATGATCAGCGATTCCATAGCTAACGAGACGCTGGAACCATCACTGGATGAACAAGGGAAACCTTTTGTCATTAGTTACGAGGTAGAAGGGTGGGAGAACTTTTACTGGTTGAGCAGGTCTTTCAACGGTGAACAATTTGATTCGTATGGCGGAGAAATCAGAGCAAGCTTATTCTGGGGCGTAGTGCGTGGTGATTCCGGAGGGAATCCTACCGTTGGTCCTGATGTGATGCTGATTTCTGCTGATGGCAGAATGCTAGCGTACGCAAACACAACCCACGAAACTCCTGGACAGCTGGAGTTATCCGTACCACTGATCGAAGGGAGCTGGTACGTGGTGGGAGATGATGAACCTTGCAGCCGTTTGCAGCTGATGGACGCGTTGCGAGATCTTCGAACTCTCATGATTAAAGCTCACTTTCATATGGACCAGGATGAGATCCGCCTGGAAAACGCTGAAATCCGTGCCCCCGTGAAGCCAGTTAGCGAGGTGTGCTCTTGTCCTGCGGGGTACACTGGAGTCCAGTGCTCATCGTGCGCGTGGTCTCACGCCAGGATCCTCCACGCAGCGGGTGCAGTGCCACCCTTCGAGTGCGTGCCGTGCGCTTGCAATGAACACGCTTCTTGTGATACCGTGGAAGGCCCTTGTGGCTCTTGTCAGCACAACACGACCGGTGCTCACTGCGAGCGCTGTCTTCCCGGCCATTATGGAAATCCAGTCCAGGGTGCTTGCAAGCCGTGCGCCTGTCCATTGTACCTGCCTTCGAATAACTTCAGCCCGAACTGCGCTCTAGCCTCTGCTGAAGGCGACGAGTTCGTCTGCACTCAATGTCCTGACGGCTACACCGGAGACCACTGCGAAAATTGTGATTTCGGGTACTGGGGCTCCCCCACGACACCCGGCGGCTCGTGTCAAGAGTGCGCGTGTGGGGGGTCGCCGTGTCATCCCACTACTGGACTTTGTCTCACTTGTCCCCCGCACACAGAGGGCGCTAGGAAACATCCTGAAGAAGAATTCGTTGAGAGGAATATTGTTAATACCAGATTACAGTGCTCAAATTAG

Protein

MLQSNIRLVLIEHYAIWFVVGRAVLDRLASTTVSDVDTVTSAAVSGLLPAPLDVAPYSVIAANATCGEDGEEEYCRDTPGKRGTVCDICEGPDGSSFRRHPPSHALDGDTSTWWQSPTLAAGEQYKHVELITTLPDKMELLHVIIKSGPSPRPLAWSLEVSASESGEDWRMIRAYGDKDHCKKIWDLRPERRRRKARAAKRINRAHKISCSTQFANYKPLENGEMHVAVGEGVSARRVRISFRGAHPTPSRQQYYTVRSLTLAARCLCHGHAQRCAVDNKGAKCECLHATCGSHCHRCCSGGSWAPHKICDETLECLCGERGQCSFDDTGATLCLNCTENRGGPSCDKCLFGYYNTVSDGPCVPCDCDPEGSDGSCEWDNKRHRVSCNCLPGFTGHLCDSCESSNAVFPLCHDIPTEPPCKCDVRGIVDPTRECDEVCECKLNVIGERCDTCASGHFGLSSDLREGCRPCYCSHVTDICELAAPDPNTPHDIVLPLGEAWMISDSIANETLEPSLDEQGKPFVISYEVEGWENFYWLSRSFNGEQFDSYGGEIRASLFWGVVRGDSGGNPTVGPDVMLISADGRMLAYANTTHETPGQLELSVPLIEGSWYVVGDDEPCSRLQLMDALRDLRTLMIKAHFHMDQDEIRLENAEIRAPVKPVSEVCSCPAGYTGVQCSSCAWSHARILHAAGAVPPFECVPCACNEHASCDTVEGPCGSCQHNTTGAHCERCLPGHYGNPVQGACKPCACPLYLPSNNFSPNCALASAEGDEFVCTQCPDGYTGDHCENCDFGYWGSPTTPGGSCQECACGGSPCHPTTGLCLTCPPHTEGARKHPEEEFVERNIVNTRLQCSN

Uniprot

A0A2H1WQI3   A0A194PYQ8   A0A212F7W4   A0A194R6J1   A0A2A4K892   A0A088AQK5   + More
A0A0L7RE06   A0A026WQX0   A0A151I948   A0A154NX77   A0A151WKC6   A0A195EW19   A0A151IWU9   Q7PN80   A0A1B0CBA8   A0A195BRX4   A0A139WHZ5   D6WJN1   A0A1S4GWE4   A0A1S4GX69   A0A084W3W6   A0A0Q9VZ62   B4M8R6   B4KEJ3   R9PY40   Q8IP51   Q9XZC9   A0A067RR33   B4P0J7   A0A0R1DLB2   A0A0J9TN74   A0A3L8DP83   B4JD84   B3MMR4   B3N9T6   A0A0R3NUL1   Q29KB2   A0A3B0KA09   A0A158NNY9   B4GX61   B4MVL9   A0A1I8N927   A0A0M4EG82   A0A1W4UXV6   A0A1W4UWG4   A0A0L0BZ21   F4WV90   A0A2H8TJH9   E2C7R0   A0A2S2PRC5   A0A182IEL8   A0A0A1X1L6   A0A182P0I5   A0A182WTG9   A0A182R3A2   A0A182JQF6   A0A182NLL5   B0WC09   A0A182QPC7   E0VR72   A0A1A9YRJ5   A0A182J6Z0   A0A182YPN5   E2AY88   A0A0A0A754   A0A1B0BIW5   A0A182M890   A0A2J7Q648   Q17L45   F1MMT2   A0A2Y9SLJ5   A0A091IVC3   A0A1B0FLF3   A0A091KA07   F6R9F5   A0A087R6F4   A0A091MR07   M3YT51   A0A336KY12   A0A340WP85   A0A340WUM1   A0A384C4V3   A0A2U4CNF2   A0A085MGE7   A0A1A9W0D4   H0VQL4   A0A384AU28   A0A384AUT2   A0A287A0X6   A0A341CJK3   A0A1D1VGG6   A0A287AP44   A0A087WRP2   A0A384AU19   A0A1D1VDZ8   A0A091GU45   F1M614  

Pubmed

26354079    22118469    24508170    12364791    18362917    19820115    + More
24438588    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    10189378    24845553    17550304    22936249    30249741    15632085    21347285    25315136    26108605    21719571    20798317    25830018    20566863    25244985    17510324    19393038    19892987    24929829    21993624    27649274    19468303    21183079    15057822   

EMBL

ODYU01010288    SOQ55288.1    KQ459584    KPI98472.1    AGBW02009824    OWR49820.1    + More
KQ460644    KPJ13282.1    NWSH01000047    PCG80226.1    KQ414611    KOC69212.1    KK107128    EZA58358.1    KQ978303    KYM95327.1    KQ434777    KZC04269.1    KQ983031    KYQ48135.1    KQ981953    KYN32433.1    KQ980843    KYN12309.1    AAAB01008964    EAA12624.5    AJWK01004935    AJWK01004936    AJWK01004937    AJWK01004938    KQ976417    KYM89765.1    KQ971343    KYB27445.1    EFA04469.2    ATLV01020177    ATLV01020178    ATLV01020179    ATLV01020180    ATLV01020181    ATLV01020182    ATLV01020183    ATLV01020184    ATLV01020185    ATLV01020186    KE525295    KFB44910.1    CH940654    KRF77830.1    EDW57592.1    CH933807    EDW11872.2    AE014134    AAF53381.3    AAN10875.1    AF135118    AAD31714.1    KK852514    KDR22194.1    CM000157    EDW88991.2    KRJ98117.1    CM002910    KMY90230.1    QOIP01000006    RLU21689.1    CH916368    EDW03257.1    CH902620    EDV31955.2    CH954177    EDV58581.1    CH379061    KRT04865.1    EAL33263.2    OUUW01000006    SPP82486.1    ADTU01021838    ADTU01021839    ADTU01021840    ADTU01021841    ADTU01021842    ADTU01021843    ADTU01021844    ADTU01021845    ADTU01021846    ADTU01021847    CH479195    EDW27388.1    CH963857    EDW75739.1    CP012523    ALC39642.1    JRES01001125    KNC25302.1    GL888384    EGI61856.1    GFXV01002027    MBW13832.1    GL453395    EFN76043.1    GGMR01019308    MBY31927.1    APCN01005209    GBXI01009637    JAD04655.1    DS231884    EDS43069.1    AXCN02000611    AXCN02000612    DS235459    EEB15878.1    GL443772    EFN61600.1    KL870806    KGL89293.1    JXJN01015211    AXCM01010359    NEVH01017541    PNF24055.1    CH477219    EAT47381.1    KL218257    KFP03591.1    CCAG010017313    KK502094    KFP20586.1    KL226140    KFM09058.1    KK835858    KFP79923.1    AEYP01006796    AEYP01006797    AEYP01006798    AEYP01006799    AEYP01006800    AEYP01006801    AEYP01006802    AEYP01006803    AEYP01006804    AEYP01006805    UFQS01001005    UFQT01001005    SSX08493.1    SSX28409.1    KL363194    KFD56293.1    AAKN02038162    AAKN02038163    AAKN02038164    AAKN02038165    AAKN02038166    AAKN02038167    AAKN02038168    AAKN02038169    AAKN02038170    AAKN02038171    AEMK02000001    BDGG01000005    GAU99875.1    AC101709    AC152982    AC153800    AC155942    AC167232    AC171406    GAU99874.1    KL447830    KFO77647.1    AABR07000583    AABR07000584    AABR07000585    AABR07000586    AABR07000587   

Proteomes

UP000053268    UP000007151    UP000053240    UP000218220    UP000005203    UP000053825    + More
UP000053097    UP000078542    UP000076502    UP000075809    UP000078541    UP000078492    UP000007062    UP000092461    UP000078540    UP000007266    UP000030765    UP000008792    UP000009192    UP000000803    UP000027135    UP000002282    UP000279307    UP000001070    UP000007801    UP000008711    UP000001819    UP000268350    UP000005205    UP000008744    UP000007798    UP000095301    UP000092553    UP000192221    UP000037069    UP000007755    UP000008237    UP000075840    UP000075885    UP000076407    UP000075900    UP000075881    UP000075884    UP000002320    UP000075886    UP000009046    UP000092443    UP000075880    UP000076408    UP000000311    UP000053858    UP000092460    UP000075883    UP000235965    UP000008820    UP000009136    UP000248484    UP000054308    UP000092444    UP000053119    UP000002281    UP000053286    UP000000715    UP000265300    UP000261680    UP000245320    UP000091820    UP000005447    UP000261681    UP000008227    UP000252040    UP000186922    UP000000589    UP000053760    UP000002494   

PRIDE

Q8IP51    Q9XZC9    F6R9F5    F1M614   

Pfam

PF00052   Laminin_B        + More
PF00053   Laminin_EGF
PF00055   Laminin_N
PF06008   Laminin_I
PF02210   Laminin_G_2
PF00054   Laminin_G_1
PF06009   Laminin_II

Interpro

IPR013032   EGF-like_CS        + More
IPR008211   Laminin_N       
IPR000742   EGF-like_dom       
IPR038684   Laminin_N_sf       
IPR002049   Laminin_EGF       
IPR000034   Laminin_IV       
IPR001190   SRCR       
IPR008979   Galactose-bd-like_sf       
IPR013087   Znf_C2H2_type       
IPR013320   ConA-like_dom_sf       
IPR001791   Laminin_G       
IPR009254   Laminin_aI       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR011641   Tyr-kin_ephrin_A/B_rcpt-like       
IPR010307   Laminin_dom_II       
IPR000679   Znf_GATA       

SUPFAM

SSF49785   SSF49785        + More
SSF49899   SSF49899       
SSF57184   SSF57184       

Gene 3D

2.60.120.1490    

ProteinModelPortal

A0A2H1WQI3   A0A194PYQ8   A0A212F7W4   A0A194R6J1   A0A2A4K892   A0A088AQK5   + More
A0A0L7RE06   A0A026WQX0   A0A151I948   A0A154NX77   A0A151WKC6   A0A195EW19   A0A151IWU9   Q7PN80   A0A1B0CBA8   A0A195BRX4   A0A139WHZ5   D6WJN1   A0A1S4GWE4   A0A1S4GX69   A0A084W3W6   A0A0Q9VZ62   B4M8R6   B4KEJ3   R9PY40   Q8IP51   Q9XZC9   A0A067RR33   B4P0J7   A0A0R1DLB2   A0A0J9TN74   A0A3L8DP83   B4JD84   B3MMR4   B3N9T6   A0A0R3NUL1   Q29KB2   A0A3B0KA09   A0A158NNY9   B4GX61   B4MVL9   A0A1I8N927   A0A0M4EG82   A0A1W4UXV6   A0A1W4UWG4   A0A0L0BZ21   F4WV90   A0A2H8TJH9   E2C7R0   A0A2S2PRC5   A0A182IEL8   A0A0A1X1L6   A0A182P0I5   A0A182WTG9   A0A182R3A2   A0A182JQF6   A0A182NLL5   B0WC09   A0A182QPC7   E0VR72   A0A1A9YRJ5   A0A182J6Z0   A0A182YPN5   E2AY88   A0A0A0A754   A0A1B0BIW5   A0A182M890   A0A2J7Q648   Q17L45   F1MMT2   A0A2Y9SLJ5   A0A091IVC3   A0A1B0FLF3   A0A091KA07   F6R9F5   A0A087R6F4   A0A091MR07   M3YT51   A0A336KY12   A0A340WP85   A0A340WUM1   A0A384C4V3   A0A2U4CNF2   A0A085MGE7   A0A1A9W0D4   H0VQL4   A0A384AU28   A0A384AUT2   A0A287A0X6   A0A341CJK3   A0A1D1VGG6   A0A287AP44   A0A087WRP2   A0A384AU19   A0A1D1VDZ8   A0A091GU45   F1M614  

PDB

2Y38     E-value=1.96728e-21,     Score=256

KEGG

101746347    K05637 laminin, alpha 1/2 | (RefSeq) laminin subunit alpha-2

GO

GO:0016020   GO:0005044   GO:0003676   GO:0016021   GO:0030334   GO:0045995   GO:0030155   GO:0005102   GO:0009888   GO:0007411   GO:0009887   GO:0005604   GO:0008406   GO:0007502   GO:0005201   GO:0007155   GO:0043083   GO:0032224   GO:0042383   GO:0031594   GO:0008270   GO:0043565   GO:0006355   GO:0014037   GO:0043197   GO:0005515   GO:0003824   GO:0004190   GO:0006508   GO:0006811   GO:0003779  

Length:

853

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.11693

Exp number, first 60 AAs:

0.11687

Total prob of N-in:

0.00612

outside

1  -  853

 

 

Pi

234.154969

Theta

175.956624

Tajima's D

0.887532

CLR

0.35963

CSRT

0.630268486575671

Interpretation

Uncertain