SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01623  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006072
Annotation
PREDICTED:_conserved_oligomeric_Golgi_complex_subunit_4-like_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.666
 

Sequence

CDS
ATGAATGTAGCCGAACCCGCGCTGGCCGAGCTGGCTCTCGCGCACTCCACCATACAGCTCTACTTCGCGTTCCTTACTAGGAGGACTCAGGCGGACGCCGCTTCCCTTCCCGAGGCTGCCAAGCAAGCGGCGCTGGATGCCGTGGAGAAACTGATAGCGGAGTGCGACCTCACGCGGACCGCACAGGACATCCTGGGGCACTACCTCGAACTCGAGAAGTTCTTCCTAGAAGAAAGCGTGAACAAGGCTCTGAAGATGGCCACTCCACAGCCCGGAAGCACCACGTCCAGTTTGGTCGACGATGTGTTTTTCATCGCCAGAAAAGTTATAAGACGCAGCATCAGCACCGGCAGCGTGGAGGGCGCGTGCGTGGTGCTGAACGAGGTGAGCGCGGTGCTGGAGCGCGACGTGACGGCGGTGCTGCGGCGCCGGCTGCGGGCCGCGCCCCCCGACCCCCTGCCGCTGCCCGCGCCGCCCGCGCCCCGCGCGCCCCGCCTCGCGCTCGACCTCACGGCGCTCGACCTCACGGCCGACCTGGCGCACGCGCTCAACAAGGACGTCGAGGCGCAGCGCCTGCTGTTCCTCGCGCACCTGGCGGAGGCGGAGGCGGGCGCGGAGTGGGCGGCGCGCCTGGCGGAGGAGGCGGTGCGGGGCGCGGGCGGCGCGGCGCGGGGACCCACCGACACGCACAAGGTGGAGTCGTGCGCGGCGGGGCTGGGCGCGGCGGCGGCGGCGCTGGCGCTGGCGGCGGAGCAGGGCGTGGCGGCGGTGCGCGCGGGGCTGGCGCCGCGGCTGGCGCTGTGGGCCGACGCGCTGGTGCAGCCCGCGCCGCTCGCAGAAGAGTTAGAGGATGATGCGGACGCGTTCCCGCAAGCCCTGGAACAGTTCTCGGAGTGCGCTCGCCAGCACCTGCCGCAGCACACGGTGGACGCGCTGCTGCTGGCCGTCGTCACAGACGTGGCCACGCGGGCCGAGGCGCGCATCCTGCACCACCACTACGACAGGGTCAGTCGCTGA
Protein
MNVAEPALAELALAHSTIQLYFAFLTRRTQADAASLPEAAKQAALDAVEKLIAECDLTRTAQDILGHYLELEKFFLEESVNKALKMATPQPGSTTSSLVDDVFFIARKVIRRSISTGSVEGACVVLNEVSAVLERDVTAVLRRRLRAAPPDPLPLPAPPAPRAPRLALDLTALDLTADLAHALNKDVEAQRLLFLAHLAEAEAGAEWAARLAEEAVRGAGGAARGPTDTHKVESCAAGLGAAAAALALAAEQGVAAVRAGLAPRLALWADALVQPAPLAEELEDDADAFPQALEQFSECARQHLPQHTVDALLLAVVTDVATRAEARILHHHYDRVSR

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
338
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.58568
Exp number, first 60 AAs:
0.53267
Total prob of N-in:
0.03252
outside
1  -  338
 
 

Population Genetic Test Statistics

Pi
172.438771
Theta
160.55113
Tajima's D
0.2191
CLR
1.4238
CSRT
0.425978701064947
Interpretation
Uncertain
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