SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01621
Annotation
hypothetical_protein_RR48_06795_[Papilio_machaon]
Location in the cell
Cytoplasmic   Reliability : 2.765 Nuclear   Reliability : 1.235
 

Sequence

CDS
ATGGGTAATGCGTGTGCTGCTTGTCTTGTCAATGGGATAGCTAAAGTCGTTCTATGGACTGGAAAAGGTTTATGGTTATTAACTCTACTTGGATTCAAGACTGTTGGGGTGGCAGCAGGGAGTCTGGCTGCTGCAGCTATGTCATTCACTGGGAATGTCTCAGCTGCCAGTACTATTGCACAAGCTACCTCAAGAATGATGAGGGCATGA
Protein
MGNACAACLVNGIAKVVLWTGKGLWLLTLLGFKTVGVAAGSLAAAAMSFTGNVSAASTIAQATSRMMRA

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
69
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
42.10664
Exp number, first 60 AAs:
41.95413
Total prob of N-in:
0.92410
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  33
TMhelix
34  -  56
inside
57  -  69
 
 

Population Genetic Test Statistics

Pi
131.524501
Theta
157.106207
Tajima's D
-0.511986
CLR
123.874999
CSRT
0.23938803059847
Interpretation
Uncertain
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