Gene

KWMTBOMO01620

Pre Gene Modal

BGIBMGA006074

Annotation

PREDICTED:_CKLF-like_MARVEL_transmembrane_domain-containing_protein_4_[Papilio_polytes]

Location

Bomo_Chr4(-):451977-456501      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.795

CDS

ATGACATACCCTAATCAACCTCGGCTACCCCAGTCCATGGGCTCTTCCAACACTATGTTTGTAACTGAAGTAAGATTTGATCCATCATACGCTAAAACGGTACCGGGAGTAATAAAAATAATCATTATAATATTCAGTTTGATTGCCTTCATCTGCATTCAAGCTTCGTCTTTCTGGTCAAATGGACGTGGAGTCTACTTCAATGTTATAGCACAATTTGGTATCTGGTATTCAGTTGGCATCCTTTTCTGCTATCTATTTCACATAGTAGAAAAATACCACAATTGGAAATGGTTACGGATTGAAATGATAGCTGATGTTGCATTTGTGTTCCTTTACCTTACAACTTCAACAATTGTTGTGGCTTTTGGATCTGCTGCATACTCAGCAGCTGGGTTTTTCGGCTACCTGACTATGGTGCTTTTCGGGAGCGACGCCTTTATAAAGTTCAACGCGATAAAGGCAGGCGAACTGGCCCAGGGACGTAAGGTCGTGGCCAAAGAGGCTCACACTCACATCGCCACACCACCGGCCATGCCGTGA

Protein

MTYPNQPRLPQSMGSSNTMFVTEVRFDPSYAKTVPGVIKIIIIIFSLIAFICIQASSFWSNGRGVYFNVIAQFGIWYSVGILFCYLFHIVEKYHNWKWLRIEMIADVAFVFLYLTTSTIVVAFGSAAYSAAGFFGYLTMVLFGSDAFIKFNAIKAGELAQGRKVVAKEAHTHIATPPAMP

Uniprot

A0A2W1BWN8   A0A2A4K7I5   A0A194R702   A0A194Q0D3   A0A212F7X2   A0A1E1W281   + More
N6UFL6   A0A2A4K8A6   A0A2W1BQ69   A0A182JF51   A0A084WBY4   A0A1E1WBQ1   A0A1Q3FFQ2   W5JLN5   A0A182R9L1   A0A2M3ZIN6   A0A2M4AV21   A0A182YFB6   A0A182NZW2   A0A194Q4W7   A0A182GVL0   A0A182T2H6   A0A1W4W5Z0   A0A023EI88   A0A182V9P4   A0A182WYP8   Q7PW02   Q16YL7   A0A182UCD8   A0A182WH26   A0A182F5D6   A0A195F9K1   A0A026VX22   A0A0K8TT38   A0A182M1Q6   E2BBX3   U5EQI3   A0A2J7QBU4   A0A336M2L0   D6WJ80   A0A2R7X0A8   A0A151WMV4   B0W1H7   A0A0V0G7Q4   F4WWY3   A0A195BX80   A0A158NCE3   A0A023F1B3   A0A151JQZ3   A0A0L7RG42   A0A1B6EXG7   A0A1J1IK14   A0A0P4VLP6   A0A154PNY3   A0A2A3E8E4   V9IB08   A0A1B0D093   A0A087ZV46   E2AYQ6   A0A1L8E2T8   T1E3V1   K7IZL1   A0A232F6D9   A0A1B6IUY1   A0A1B0C907   T1JEB9   A0A151IBZ1   A0A1B6KCF7   A0A162QYT6   A0A2P2I6N7   A0A2P8XR23   A0A0P6IQR9   A0A0A9W091   A0A0J7K9U5   X1WUT1   A0A2S2P618   E9FR29   T1E2H4   A0A1B6CLX8   A0A2S2QN73   T1KTW6   A0A0T6AZD7   A0A0C9RNK5   A0A087T1V2   A0A2W1BSB3   A0A2A4K8K1  

Pubmed

28756777    26354079    22118469    23537049    24438588    20920257    + More
23761445    25244985    26483478    24945155    12364791    14747013    17210077    17510324    24508170    30249741    26369729    20798317    18362917    19820115    21719571    21347285    25474469    27129103    24330624    20075255    28648823    29403074    25401762    26823975    21292972   

EMBL

KZ149934    PZC77220.1    NWSH01000047    PCG80235.1    KQ460644    KPJ13299.1    + More
KQ459584    KPI98454.1    AGBW02009824    OWR49837.1    GDQN01010932    GDQN01010586    GDQN01009981    GDQN01006844    GDQN01006638    GDQN01004581    GDQN01002001    JAT80122.1    JAT80468.1    JAT81073.1    JAT84210.1    JAT84416.1    JAT86473.1    JAT89053.1    APGK01023663    KB740510    ENN80520.1    PCG80236.1    PZC77219.1    ATLV01022519    KE525333    KFB47728.1    GDQN01006658    JAT84396.1    GFDL01008676    JAV26369.1    ADMH02000797    ETN65036.1    GGFM01007584    MBW28335.1    GGFK01011318    MBW44639.1    KPI98455.1    JXUM01091236    JXUM01091237    KQ563898    KXJ73096.1    GAPW01004972    JAC08626.1    AAAB01008984    EAA15110.3    CH477514    EAT39718.1    KQ981727    KYN37056.1    KK107648    QOIP01000008    EZA48307.1    RLU19681.1    GDAI01000074    JAI17529.1    AXCM01006387    GL447175    EFN86797.1    GANO01004231    JAB55640.1    NEVH01016296    PNF26063.1    UFQT01000438    SSX24310.1    KQ971343    EFA04436.1    KK856221    PTY25226.1    KQ982934    KYQ49150.1    DS231822    EDS25775.1    GECL01002094    JAP04030.1    GL888417    EGI61226.1    KQ976396    KYM92900.1    ADTU01011823    GBBI01003447    JAC15265.1    KQ978619    KYN29786.1    KQ414598    KOC69815.1    GECZ01027065    GECZ01021950    GECZ01016993    GECZ01014935    GECZ01002849    JAS42704.1    JAS47819.1    JAS52776.1    JAS54834.1    JAS66920.1    CVRI01000054    CRL00589.1    GDKW01001237    JAI55358.1    KQ435007    KZC13591.1    KZ288348    PBC27476.1    JR038487    AEY58275.1    AJVK01002280    GL443983    EFN61419.1    GFDF01001046    JAV13038.1    GALA01000040    JAA94812.1    NNAY01000851    OXU26205.1    GECU01016971    JAS90735.1    AJWK01001704    AJWK01001705    AJWK01001706    AJWK01001707    JH432116    KQ978076    KYM97209.1    GEBQ01030844    GEBQ01003427    JAT09133.1    JAT36550.1    LRGB01000248    KZS20075.1    IACF01004098    LAB69693.1    PYGN01001496    PSN34447.1    GDIQ01028464    JAN66273.1    GBHO01041752    GBRD01009238    GDHC01021230    JAG01852.1    JAG56583.1    JAP97398.1    LBMM01010836    KMQ87198.1    ABLF02023837    GGMR01012290    MBY24909.1    GL732523    EFX90087.1    GALA01000709    JAA94143.1    GEDC01029686    GEDC01022852    JAS07612.1    JAS14446.1    GGMS01009797    MBY79000.1    CAEY01000548    LJIG01022548    KRT79991.1    GBYB01015092    JAG84859.1    KK113013    KFM59091.1    PZC77221.1    PCG80234.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000019118    UP000075880    + More
UP000030765    UP000000673    UP000075900    UP000076408    UP000075885    UP000069940    UP000249989    UP000075901    UP000192223    UP000075903    UP000076407    UP000007062    UP000008820    UP000075902    UP000075920    UP000069272    UP000078541    UP000053097    UP000279307    UP000075883    UP000008237    UP000235965    UP000007266    UP000075809    UP000002320    UP000007755    UP000078540    UP000005205    UP000078492    UP000053825    UP000183832    UP000076502    UP000242457    UP000092462    UP000005203    UP000000311    UP000002358    UP000215335    UP000092461    UP000078542    UP000076858    UP000245037    UP000036403    UP000007819    UP000000305    UP000015104    UP000054359   

Pfam

PF01284   MARVEL        + More
PF14688   DUF4461
PF14687   DUF4460

Interpro

IPR008253   Marvel        + More
IPR027989   DUF4461       
IPR027986   TCAIM       
IPR028031   DUF4460       

ProteinModelPortal

A0A2W1BWN8   A0A2A4K7I5   A0A194R702   A0A194Q0D3   A0A212F7X2   A0A1E1W281   + More
N6UFL6   A0A2A4K8A6   A0A2W1BQ69   A0A182JF51   A0A084WBY4   A0A1E1WBQ1   A0A1Q3FFQ2   W5JLN5   A0A182R9L1   A0A2M3ZIN6   A0A2M4AV21   A0A182YFB6   A0A182NZW2   A0A194Q4W7   A0A182GVL0   A0A182T2H6   A0A1W4W5Z0   A0A023EI88   A0A182V9P4   A0A182WYP8   Q7PW02   Q16YL7   A0A182UCD8   A0A182WH26   A0A182F5D6   A0A195F9K1   A0A026VX22   A0A0K8TT38   A0A182M1Q6   E2BBX3   U5EQI3   A0A2J7QBU4   A0A336M2L0   D6WJ80   A0A2R7X0A8   A0A151WMV4   B0W1H7   A0A0V0G7Q4   F4WWY3   A0A195BX80   A0A158NCE3   A0A023F1B3   A0A151JQZ3   A0A0L7RG42   A0A1B6EXG7   A0A1J1IK14   A0A0P4VLP6   A0A154PNY3   A0A2A3E8E4   V9IB08   A0A1B0D093   A0A087ZV46   E2AYQ6   A0A1L8E2T8   T1E3V1   K7IZL1   A0A232F6D9   A0A1B6IUY1   A0A1B0C907   T1JEB9   A0A151IBZ1   A0A1B6KCF7   A0A162QYT6   A0A2P2I6N7   A0A2P8XR23   A0A0P6IQR9   A0A0A9W091   A0A0J7K9U5   X1WUT1   A0A2S2P618   E9FR29   T1E2H4   A0A1B6CLX8   A0A2S2QN73   T1KTW6   A0A0T6AZD7   A0A0C9RNK5   A0A087T1V2   A0A2W1BSB3   A0A2A4K8K1  

KEGG

101744183    no KO assigned | (RefSeq) CKLF-like MARVEL transmembrane domain-containing protein 4

GO

GO:0016021   GO:0016020   GO:0004523   GO:0003824   GO:0004190   GO:0006508   GO:0006811   GO:0005515   GO:0003779  

PANTHER

PTHR31596  

Length:

180

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

77.3246

Exp number, first 60 AAs:

21.98277

Total prob of N-in:

0.92687

POSSIBLE N-term signal

sequence

inside

1  -  35

TMhelix

36  -  58

outside

59  -  67

TMhelix

68  -  90

inside

91  -  109

TMhelix

110  -  132

outside

133  -  180

 

 

Pi

177.924151

Theta

189.874208

Tajima's D

-0.657092

CLR

0.530076

CSRT

0.209539523023849

Interpretation

Uncertain