SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01614
Pre Gene Modal
BGIBMGA006080
Annotation
PREDICTED:_polyamine-modulated_factor_1-binding_protein_1-like_isoform_X3_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.559
 

Sequence

CDS
ATGAGGATACAAAGCGAGAGTCTCGCCGTGGCCGAGGCCAGGATCACGGTGCTCACAACGAAACTGGCAGATATGAGGAGGGAAGTTGACAGGAAAGACATGGAGATTCAAAGCCTTCGCAAAACGATCGAAGATAACAAAATAGAGAAGATCGGAATTTCGATCGACGCTCAAACTCAACTGGAATTGGTAAATCAGAAAAATGTCGTCCAAACATTGCAAGATAATTTGAGCGTCATAGAGGAACTGTATCGGGAGTGTTTCTATGAGACAGCAAAACAGGAAAATTTGATTGAAATGTTGAGAAAGTCGATTTTAGATATAAGAATGATAGAAAGAGACAAAAGTAATCAGATCGACAAACTGCAGACCGTTGTGAAAACACAGCAGTGGTCCTTGGATAAGTGTCAGGACATTGCGCTGGAAGTGGAAGCCCTGAAGCTGGAGATATCTAACTTCCTGCACGGCTCCAACAACGATTCGGGCATGTGGGAGCGCAGTGACGCGTCCGTGGCCTCGGGCGTCGGCGAGGACCTGCAGGACATCATGGACCACCTCCTCAAGCTGAGGGACATGCTCACAGGCGATTGCATATGCGGACTGCAAGATGAGAATGCAAGACTGAATGAGGTCAATAAAAATACACAGGAGGAAGTTAGGCAGCTCCGTAGACGGCTCAGTGACCTGGAGGTCGCCTTGGAAGAAGAAAAACAATCTAGGAAGGAATTGAAACAACTTATAAGCCTGAAGGAGGACGAGTTAAACGTGATGAAGTCACAAGTGTCGGCGATGGGCGCGACGTCTCGGGACCAGAGCGCGGCCTGCGACTCCATGTCGGTGCAGCTGCATCAGCTCCAAGTTATGTTAGAAGACAAGACGGAAGAGTTGCGCCGAGTGAGTCAGCAGCGTGACTGCTATGAGCAGACCGCTGAGGGGCTGAGGGAGCAACTCCAGAAGACCGATAGTGTCGCTAAGGAGAACATGAACCTGCGCATCGAAGTGTCGAGTTTAATGAAGCAAGTGTCGCAGTGTCGCAGCGAGCTGGCGGACACCGCGAGCCGTCACCGCGCGCTGCGGGACGAGCTGCGCCGCGCGGAGACACACATACTACATGTCGATGATATTTTTAGAGAACAAGAAAATACAATTAAAACGCAACAGACTATAATATCAACTTTAAAAGAAAGATTAAAAACGAAAGAGAAAGGAACACGAAGAGGCGGAGAAAGCGAAGCGAGCTGCTCAAAATGTGCAAGTCATAGAATAACAGAGACTGCACTTGGTTCTGCGAGTTGTTATTCTTCGAACGACGAAAAGAGACGAATGCATTGGGCCAGTACGAGTGGAAGTGAGATGGCAAGCTGTTCGTCAGCCCCGGTTCCGCCAAAGAGGATGCTTAGAAAACACACTTGTGATGAGGCGGCGCAGTGCCCGGCGCGACGCCACGCCGCCACCGACACCCGCTCTGCGCACCGGGAACATGACCTATTGGATGGCGCGGCGCTGGCGGGTCGCGTGCGCGCGGTGGGCGCGGCGCTGGCGGCCCGGCGGCGCCGCTGGGCCCGCACGCCCGACGCCTGA
Protein
MRIQSESLAVAEARITVLTTKLADMRREVDRKDMEIQSLRKTIEDNKIEKIGISIDAQTQLELVNQKNVVQTLQDNLSVIEELYRECFYETAKQENLIEMLRKSILDIRMIERDKSNQIDKLQTVVKTQQWSLDKCQDIALEVEALKLEISNFLHGSNNDSGMWERSDASVASGVGEDLQDIMDHLLKLRDMLTGDCICGLQDENARLNEVNKNTQEEVRQLRRRLSDLEVALEEEKQSRKELKQLISLKEDELNVMKSQVSAMGATSRDQSAACDSMSVQLHQLQVMLEDKTEELRRVSQQRDCYEQTAEGLREQLQKTDSVAKENMNLRIEVSSLMKQVSQCRSELADTASRHRALRDELRRAETHILHVDDIFREQENTIKTQQTIISTLKERLKTKEKGTRRGGESEASCSKCASHRITETALGSASCYSSNDEKRRMHWASTSGSEMASCSSAPVPPKRMLRKHTCDEAAQCPARRHAATDTRSAHREHDLLDGAALAGRVRAVGAALAARRRRWARTPDA

Summary

Interpro
IPR011031   Multihaem_cyt       
PDB
6FSA     E-value=0.0581697,     Score=86

Ontologies

GO

Topology

Length:
526
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00362
Exp number, first 60 AAs:
0.00037
Total prob of N-in:
0.00181
outside
1  -  526
 
 

Population Genetic Test Statistics

Pi
180.348437
Theta
186.275204
Tajima's D
0.361182
CLR
0.838166
CSRT
0.475176241187941
Interpretation
Uncertain
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