Gene

KWMTBOMO01610

Pre Gene Modal

BGIBMGA006086

Annotation

hypothetical_protein_KGM_11415_[Danaus_plexippus]

Location

Bomo_Chr4(+):340562-346594      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.559

CDS

ATGGATATTTCGTATCAGTATTCTAAGAAACGATGCCGTTTCGGTGGTCAGCCTCAGTTCTGCGAGCAGGGCCCGGAGATGTGCGACAGCATCGCCACGAATGTCGTCGAGCACAAGAACTTCATCCTGCGGAACCCCGTGCACCAGCCCACGCAGCACACTCCTTTCTATTCTGAAAACAACGCTAATACCATCAGAACGGACTACAGCTCATCAGGAGCGAACCACGCGGAAGGTGGGTGGCCTAAAGATGTCAGCGTCATCGATCCCGAAGCCACACAGCGGTACCGACGTAAAGTTGAAAAAGATGACAACTACATCAACTGCGTCATGTCCACTGCTCCGGAGATGGATCATTACGTGCTCCAAAACAACGCCATCGACATGTACCGAACGTACTATGCAGAAATGCCATCTATGCCAGAACTGGAACGCATCAGCTGTCGCACTGTGAACGTGTATCGCGACGGTGATGGAACGGAAGCGACGCGACCGGTCAGCTCCATATGCTGGCAGCCTGATGGCGGCCAACGCTTCGCAGTCACCTACATCGACGTGGACTTCAACCGCAACGCGCGAGCGCCCATTGTCTCTTACATTTGGAACTTGGAGAACGCGAATCAACCAGAAGTAACGTTCACACCACCATGCCCGCTCTTAGATTTGATATATAATCCTCGTGATCAAAACCTTATGGCTGGTGGTTTGGTTAATGGACAGGTCGGCGTGTGGGACGCACGAAAAGGCGGCGATCCAACTCTCACATGTCCACCGCATGTTGCCCATCGAGATCTTGTGCGAAACGTCATATTCATCAACTCTAAATCGGGACTAGAGTTCTTCTCTGGAGGATCAGACGGGGCCTGTAAGTGGTGGGACATCCGAAACATGAGTGAGCCTGTGGAAGAGATGATTTTAGATGCAGTGAAGTCTTCATTTGACGTTCAAACGATGGCTAAAGCTAACGGTGTGACAGCATTAGAATTCGAGCCCACTATGCCGACGCGCTTCATGGCTGGAACTGAAAACGGACTTATCATCGGAGGCAACCGTAAAGGAAAGACACCGTTAGAGAAAATACCTCTTAAGATGGAAGCGCACCTGGGTCCCATCTGGTCCCTGGAGCGTAATCCGGGATTTTTGAAAAATTTTCTAACCGTTGGAGATTGGACAGCACGAATTTGGAGCGAGGACTGTCGCGAATCTCCCGTACTATGGTCTCCTCTACATCGGCACAAGATCACTGCTGGTACTTGGAGTCCAACTAGGTCCTCATTGATGCTGCTGGCTCAGTGGAACGGGACGCTAGCGACGTGGGACCTGTTGCGGCGTCAGCATGAGCCCGTACTCACTATGCACGTCTGTGATGAACCGCTTTTGAGGCTCAAAACTCATGAAAGGGGTACGCTCGTGGCTTGCGGGAGTCAGAAGGGTAGCATTTTCATGGTGGAACTGTCGCAAACCTTGACACAGTCTGATAAAAACGATAAGACATTGCTGACAGCGGTATTGGAACGGGAGAGTAAAAGGGAGCGTATTCTGGAGGCTCGCATGCGTGAGATTAGATTGAAGATGCGTCAGGCCGAGGAGGGCTCGCCGCGCGCCTCGCTCACGGAGCCCGAGCTACCCTTTGACGTCAACGCTGTCACGGCCGAGTACTTTGCAATCGTGAAGAAAGAACTAGCCGCCCTGTGA

Protein

MDISYQYSKKRCRFGGQPQFCEQGPEMCDSIATNVVEHKNFILRNPVHQPTQHTPFYSENNANTIRTDYSSSGANHAEGGWPKDVSVIDPEATQRYRRKVEKDDNYINCVMSTAPEMDHYVLQNNAIDMYRTYYAEMPSMPELERISCRTVNVYRDGDGTEATRPVSSICWQPDGGQRFAVTYIDVDFNRNARAPIVSYIWNLENANQPEVTFTPPCPLLDLIYNPRDQNLMAGGLVNGQVGVWDARKGGDPTLTCPPHVAHRDLVRNVIFINSKSGLEFFSGGSDGACKWWDIRNMSEPVEEMILDAVKSSFDVQTMAKANGVTALEFEPTMPTRFMAGTENGLIIGGNRKGKTPLEKIPLKMEAHLGPIWSLERNPGFLKNFLTVGDWTARIWSEDCRESPVLWSPLHRHKITAGTWSPTRSSLMLLAQWNGTLATWDLLRRQHEPVLTMHVCDEPLLRLKTHERGTLVACGSQKGSIFMVELSQTLTQSDKNDKTLLTAVLERESKRERILEARMREIRLKMRQAEEGSPRASLTEPELPFDVNAVTAEYFAIVKKELAAL

Uniprot

H9J994   H9J995   A0A212F7F5   A0A2W1BCK5   A0A2H1V4H2   A0A0L7KHE8   + More
A0A194QXZ9   A0A0L7KUC8   A0A2A4JFG7   A0A2W1BBN8   A0A194PF73   A0A2H1V2V5   A0A194PLU7   A0A2H1W9I7   A0A194QZY6   A0A2A4JH19   A0A212FGV3   H9JQE6   A0A2A4K9W5   A0A1B6H019   E0VIU6   A0A067QXI2   D6WDC8   B4KUS4   A0A0Q9XLF0   A0A1I8NBK1   B4J2I6   A0A0Q9WXR2   B4LCQ9   A0A0R3P4Z7   B4HAH2   B3M4B0   Q2LZ77   A0A0L0BL07   F4W6B8   A0A1W4VTJ2   A0A1B0B9U4   A0A1A9VG63   E2BG01   A0A3B0JVL1   A0A158P2L6   A0A0M4EBX6   A0A0Q9WSC5   A0A1A9WH63   Q4V560   B4N4L9   M9PC80   Q9VTM3   B4QQ99   B4HEX4   B4PFM9   A0A195FJF9   B3NGZ3   A0A1Y1KE26   A0A1Y1K6N5   A0A151XCS7   A0A2J7QWB5   N6T1P0   B0WLC7   A0A3L8DB42   Q7QGH2   A0A182ITQ6   A0A1Q3FTJ5   A0A182XC21   A0A182V9I7   A0A182LP72   A0A182HNC0   A0A182MUH2   A0A182WEV4   A0A195DMF1   A0A0J9UJB0   A0A0J9RUU5   A0A336LZL3   A0A336MZX5   E2B285   A0A182MY67   A0A182KAP0   A0A0L7QZ97   A0A182Y5Y0   Q16TL6   A0A182R0Y4   A0A1J1HMN4   A0A1B0C9D7   A0A026VZA0   A0A1B0G3X0   A0A182RD31   A0A182FC30   W5JAU1   A0A088A7L4   A0A154PC68   K7IM39   A0A210PH44   A0A1B0D579   A0A3P8YL09   A0A182TS26   A0A0N0BC27   A0A3B4DKT8   V4B996   A0A2D0S6C3   F6XSE5  

Pubmed

19121390    22118469    28756777    26227816    26354079    20566863    + More
24845553    18362917    19820115    17994087    25315136    15632085    26108605    21719571    20798317    21347285    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    28004739    23537049    30249741    12364791    20966253    22936249    25244985    17510324    24508170    20920257    23761445    20075255    28812685    25069045    23254933    20431018   

EMBL

BABH01004332    AGBW02009873    OWR49674.1    KZ150474    PZC70746.1    ODYU01000427    + More
SOQ35174.1    JTDY01009838    KOB62521.1    KQ461154    KPJ08451.1    JTDY01005576    KOB66868.1    NWSH01001606    PCG70721.1    PZC70747.1    KQ459606    KPI91673.1    SOQ35175.1    KQ459599    KPI94411.1    ODYU01007193    SOQ49759.1    KQ460883    KPJ11108.1    PCG70720.1    AGBW02008593    OWR52965.1    BABH01011924    BABH01011925    BABH01011926    NWSH01000021    PCG80688.1    GECZ01001756    JAS68013.1    DS235206    EEB13302.1    KK852855    KDR14924.1    KQ971321    EEZ99548.1    CH933809    EDW19330.1    KRG06602.1    CH916366    EDV97071.1    CH940647    KRF85205.1    EDW70951.1    CH379069    KRT08217.1    CH479240    EDW37570.1    CH902618    EDV39380.2    EAL29631.2    JRES01001711    KNC20623.1    GL887707    EGI70253.1    JXJN01010587    GL448096    EFN85403.1    OUUW01000002    SPP76771.1    ADTU01006976    CP012525    ALC45054.1    CH964095    KRF99008.1    BT022764    BT022796    BT022804    AAY55180.1    AAY55212.1    AAY55220.1    EDW79093.1    AE014296    AGB94417.1    AAF50024.2    CM000363    EDX10117.1    CH480815    EDW41143.1    CM000159    EDW94178.2    KQ981523    KYN40397.1    CH954178    EDV51450.2    GEZM01091218    JAV57017.1    GEZM01091208    JAV57034.1    KQ982297    KYQ58174.1    NEVH01009765    PNF32875.1    APGK01055684    APGK01055685    KB741269    KB632330    ENN71438.1    ERL92589.1    DS231984    EDS30420.1    QOIP01000010    RLU17333.1    AAAB01008834    EAA05710.4    GFDL01004302    JAV30743.1    APCN01001903    AXCM01003863    KQ980724    KYN14063.1    CM002912    KMY99050.1    KMY99049.1    UFQT01000346    SSX23434.1    UFQT01002710    SSX33977.1    GL445067    EFN60211.1    KQ414681    KOC63945.1    CH477645    EAT37861.1    AXCN02002036    CVRI01000011    CRK89309.1    AJWK01002233    AJWK01002234    AJWK01002235    AJWK01002236    KK107670    EZA48184.1    CCAG010011538    ADMH02001775    ETN61121.1    KQ434870    KZC09485.1    NEDP02076708    OWF35787.1    AJVK01003394    AJVK01003395    KQ435955    KOX68072.1    KB199905    ESP03921.1    AAMC01045484   

Proteomes

UP000005204    UP000007151    UP000037510    UP000053240    UP000218220    UP000053268    + More
UP000009046    UP000027135    UP000007266    UP000009192    UP000095301    UP000001070    UP000008792    UP000001819    UP000008744    UP000007801    UP000037069    UP000007755    UP000192221    UP000092460    UP000078200    UP000008237    UP000268350    UP000005205    UP000092553    UP000007798    UP000091820    UP000000803    UP000000304    UP000001292    UP000002282    UP000078541    UP000008711    UP000075809    UP000235965    UP000019118    UP000030742    UP000002320    UP000279307    UP000007062    UP000075880    UP000076407    UP000075903    UP000075882    UP000075840    UP000075883    UP000075920    UP000078492    UP000000311    UP000075884    UP000075881    UP000053825    UP000076408    UP000008820    UP000075886    UP000183832    UP000092461    UP000053097    UP000092444    UP000075900    UP000069272    UP000000673    UP000005203    UP000076502    UP000002358    UP000242188    UP000092462    UP000265140    UP000075902    UP000053105    UP000261440    UP000030746    UP000221080    UP000008143   

PRIDE

H9J994    H9J995    H9JQE6    Q4V560    Q9VTM3   

Pfam

PF00658   PABP        + More
PF00400   WD40

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR019775   WD40_repeat_CS       
IPR017986   WD40_repeat_dom       
IPR036322   WD40_repeat_dom_sf       
IPR001680   WD40_repeat       
IPR002004   PABP_HYD       
IPR036053   PABP-dom       

SUPFAM

SSF50978   SSF50978        + More
SSF63570   SSF63570       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9J994   H9J995   A0A212F7F5   A0A2W1BCK5   A0A2H1V4H2   A0A0L7KHE8   + More
A0A194QXZ9   A0A0L7KUC8   A0A2A4JFG7   A0A2W1BBN8   A0A194PF73   A0A2H1V2V5   A0A194PLU7   A0A2H1W9I7   A0A194QZY6   A0A2A4JH19   A0A212FGV3   H9JQE6   A0A2A4K9W5   A0A1B6H019   E0VIU6   A0A067QXI2   D6WDC8   B4KUS4   A0A0Q9XLF0   A0A1I8NBK1   B4J2I6   A0A0Q9WXR2   B4LCQ9   A0A0R3P4Z7   B4HAH2   B3M4B0   Q2LZ77   A0A0L0BL07   F4W6B8   A0A1W4VTJ2   A0A1B0B9U4   A0A1A9VG63   E2BG01   A0A3B0JVL1   A0A158P2L6   A0A0M4EBX6   A0A0Q9WSC5   A0A1A9WH63   Q4V560   B4N4L9   M9PC80   Q9VTM3   B4QQ99   B4HEX4   B4PFM9   A0A195FJF9   B3NGZ3   A0A1Y1KE26   A0A1Y1K6N5   A0A151XCS7   A0A2J7QWB5   N6T1P0   B0WLC7   A0A3L8DB42   Q7QGH2   A0A182ITQ6   A0A1Q3FTJ5   A0A182XC21   A0A182V9I7   A0A182LP72   A0A182HNC0   A0A182MUH2   A0A182WEV4   A0A195DMF1   A0A0J9UJB0   A0A0J9RUU5   A0A336LZL3   A0A336MZX5   E2B285   A0A182MY67   A0A182KAP0   A0A0L7QZ97   A0A182Y5Y0   Q16TL6   A0A182R0Y4   A0A1J1HMN4   A0A1B0C9D7   A0A026VZA0   A0A1B0G3X0   A0A182RD31   A0A182FC30   W5JAU1   A0A088A7L4   A0A154PC68   K7IM39   A0A210PH44   A0A1B0D579   A0A3P8YL09   A0A182TS26   A0A0N0BC27   A0A3B4DKT8   V4B996   A0A2D0S6C3   F6XSE5  

PDB

6F3A     E-value=2.79282e-16,     Score=210

KEGG

101743082    K11143 dynein intermediate chain 2, axonemal | (RefSeq) dynein intermediate chain 3, ciliary-like

GO

GO:0045503   GO:0007018   GO:0036158   GO:0003341   GO:0036157   GO:0045504   GO:0007605   GO:0010996   GO:0030425   GO:0046692   GO:0043025   GO:0003723   GO:0008574   GO:0005515   GO:0004523   GO:0003824   GO:0004190   GO:0006508   GO:0006811   GO:0016020   GO:0003779   GO:0016021  

Length:

564

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00383

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00473

outside

1  -  564

 

 

Pi

282.262654

Theta

204.624551

Tajima's D

1.050332

CLR

0.467135

CSRT

0.670716464176791

Interpretation

Uncertain