SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01607  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006083
Annotation
PREDICTED:_carbonyl_reductase_[NADPH]_1-like_[Amyelois_transitella]
Full name
Transmembrane 9 superfamily member      
Location in the cell
Extracellular   Reliability : 1.959
 

Sequence

CDS
ATGTCGACCAGAGTAGCCGTAGTGACTGGCGCGAACAAAGGCATCGGTTTTGCCATAGTCAAGGCTCTATGTCAGAAATTTGATGGCGTAGTGTATTTGACTTCTCGTGATGAGACTCGGGGCCAGCAATCTCTCAGTGAGCTGAAGCAGCTCGGCTTGAGCCCTGAGTTCCACCAACTGGATGTCGCTGATAAGGACAGCGTCAAACGATTCGCGGACCACATCGAAAAGAAGCACGGGGGCATCGACATTCTCATCAACAACGCCGGCGTTGCTAACGGAATTCAAATTGGGAGACCTTACGAAGAGAACAAAGCCATTGTTGACATCAACTACTTCAGCATTTTGACCATCAAGGAGTATCTGTTCCCGTTGCTGCGGGACAAGGCACGTGTGTTAAACATCTCCAGTGACTGTGGTCATTTATCCAATGTCAAAAATAAGTACTGGCTGGAGAGGTTATCAAAGAAAGATCTGACGGTCGAAATTATTAACGAATTCGTTAACTGGTATCTAGAGTCCGAGAAGAACGGAAGCTTTAACCCTGAAGATATGGTTGAAGGAGGAATCTTAGCCGCATATAGAGTAGCCAAGGTGGCTCTCAGTGCTATCACCATGGTCCATCAGAAAGAGCTAGAAGCTAGGAACATTGTGGTGAACTCTATGCATCCAGGGCTGGTGAGGACTGACATGACGACCGGGAGAGGCTTTTATAGTGCAGACGACGCTGCCAAAACTCCTGTGTATTTGGTACTGGAAGCTCCAGACACGCTGAAGGGCGCATATGTATGGTACGACGGTCAGGTCATAGACTGGTATGATTATAATGGAGACTATGCCTTCAAGTCCTCAACATTGTTAGATTAA
Protein
MSTRVAVVTGANKGIGFAIVKALCQKFDGVVYLTSRDETRGQQSLSELKQLGLSPEFHQLDVADKDSVKRFADHIEKKHGGIDILINNAGVANGIQIGRPYEENKAIVDINYFSILTIKEYLFPLLRDKARVLNISSDCGHLSNVKNKYWLERLSKKDLTVEIINEFVNWYLESEKNGSFNPEDMVEGGILAAYRVAKVALSAITMVHQKELEARNIVVNSMHPGLVRTDMTTGRGFYSADDAAKTPVYLVLEAPDTLKGAYVWYDGQVIDWYDYNGDYAFKSSTLLD

Summary

Similarity
Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
EMBL
BABH01004306    KQ459584    KPI98444.1    KQ460644    KPJ13305.1    EF085953    + More
ABK25249.1    KZ149934    PZC77229.1    KPI98448.1    NWSH01000963    PCG73377.1    EZ407185    ACX53746.1    KPJ13306.1    KPI98447.1    ODYU01003092    SOQ41411.1    PCG73376.1    AGBW02009113    OWR51646.1    PZC77228.1    JTDY01002114    KOB72078.1    KPI98446.1    KPI98445.1    OWR51645.1    KPJ13307.1    KQ459053    KPJ04248.1    KQ461157    KPJ08086.1    KQ460325    KPJ15839.1    JTDY01003824    KOB68949.1    KZ150152    PZC72817.1    KQ459193    KPJ03086.1    NWSH01004922    PCG64583.1    NWSH01008342    PCG62595.1    ODYU01011980    SOQ58033.1    GAIX01009148    JAA83412.1    KQ459601    KPI93721.1    KQ461196    KPJ06479.1    ODYU01011824    SOQ57785.1    AGBW02009105    OWR51675.1    BABH01010518    AK401971    BAM18593.1    GAIX01003872    JAA88688.1    KQ459597    KPI95235.1    ODYU01005228    SOQ45880.1    KQ460466    KPJ14621.1    JTDY01000815    KOB75776.1    KPJ14619.1    GECU01027825    GECU01017498    JAS79881.1    JAS90208.1    SOQ45879.1    NWSH01006830    PCG63222.1    BT126507    AEE61471.1    GECZ01017087    GECZ01016387    JAS52682.1    JAS53382.1    JTDY01008746    KOB64420.1    KQ971352    EFA07299.1    GEZM01096800    GEZM01096799    JAV54571.1    GEDC01027847    GEDC01011823    JAS09451.1    JAS25475.1    GEFH01004098    JAP64483.1    GALX01002952    JAB65514.1    GBBI01001358    JAC17354.1    GEBQ01024723    JAT15254.1    GECZ01027302    JAS42467.1    BABH01037460    GADI01004071    JAA69737.1    BT126771    AEE61733.1    GFJQ02007744    JAV99225.1    ACPB03015037    GAHY01001144    JAA76366.1    GDRN01075845    JAI62981.1    GDIQ01245914    GDIQ01172784    GDIP01056074    LRGB01002384    JAK05811.1    JAM47641.1    KZS07833.1    GEZM01088470    JAV58180.1    GECU01015736    JAS91970.1    GEBQ01008269    JAT31708.1    GDKW01001428    JAI55167.1    GFWV01003337    MAA28067.1    GBBK01005242    JAC19240.1    NEVH01019373    PNF22703.1    GADI01006938    JAA66870.1    GEFM01004999    JAP70797.1    GEBQ01006036    JAT33941.1    ODYU01003722    SOQ42855.1    GEZM01008630    JAV94726.1    KK853628    KDR03826.1    GGLE01006223    MBY10349.1    GDIP01118656    JAL85058.1    APGK01025878    KB740605    ENN80024.1    KZ288282    PBC29609.1    GL450619    EFN80721.1    GFPF01006553    MAA17699.1    GACK01007031    JAA58003.1    GFPF01005493    MAA16639.1    GEDV01003386    JAP85171.1    GBHO01042553    GBRD01010365    JAG01051.1    JAG55459.1    GFTR01004535    JAW11891.1    GFPF01006552    MAA17698.1    JO844144    AEO35761.1    GDIQ01010210    JAN84527.1    GEBQ01010531    JAT29446.1    KQ976885    KYN07425.1    GBBM01002050    JAC33368.1    GBBM01002053    JAC33365.1    GEDC01025189    JAS12109.1    APGK01054937    KB741253    KB632340    ENN71824.1    ERL92968.1    KK854031    PTY09833.1    ADTU01007360    GACK01005752    JAA59282.1    GEDC01025309    JAS11989.1   
Pfam
PF00106   adh_short        + More
PF02990   EMP70
Interpro
IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       
IPR004240   EMP70       
IPR020846   MFS_dom       
SUPFAM
SSF51735   SSF51735       
PDB
4Z3D     E-value=9.11261e-43,     Score=435

Ontologies

Topology

Length:
288
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.16025
Exp number, first 60 AAs:
0.13934
Total prob of N-in:
0.06271
outside
1  -  288
 
 

Population Genetic Test Statistics

Pi
260.637658
Theta
224.760769
Tajima's D
0.502656
CLR
0
CSRT
0.515674216289186
Interpretation
Uncertain
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