SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01602
Annotation
PREDICTED:_uncharacterized_protein_LOC105842664?_partial_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.604
 

Sequence

CDS
ATGATTTCTGCATTTGGTGATGAAGCCCCATCCAAAACCACAATTTATCGCTGGTTTGCTGAGTTTCAACGTGGACGTGTCAAGCTCAGTGATGATCTCCGTCAAGGTCATCCAAAAACTACAGTCACCCAAGAAAACGTTGATGCTGTGCGTAAGCTGATTGAGGAAGATCGACATGTGACATACCGCGAAATTCAGGCAACTTTAGACATTGGCATGAGTCAAATACAAATAATCTTGCATGAACAATTAGGTGTAAAAAAGTTGTTTTCCCGATGGATACCGCATTCGCTCTGTGAAGAGCAAAAAGCGGCTCGCGTTACTTGGTGCGTCAGAACTCTCGAAAGATTCCACGCAGGATCCTCAAATGCTGTATACAACATTGTATTAGTATGTAGAAATTATTATCACATCGGCTGTGTTCTTCCTGCAAAAAAGGATTGGACGCCGGATTCAGAATTTAAGTCTACATGGATATGTCTTAATTGTGCGACTAGATCACGCACTGTTAATGATGACACTCCTGTCCGAGGCAATGTGAGGCCTCGAGCACCTGATACATCCAATGTTGCGATGAGACCGTTGCGTACTGGATCCAGGGAACGTGAGGGACCTGAATTACAGGTTGTCCCTTTGGAACAGGTCAGGAGTATAGTGCGCGCGGAAGTCCAGGAAGCTGTTGCTTGTTTCAGGGACACTATTCTTGAGCTCAAGAGTGAAATCTCAACTCTTCGTGATAGTGTCTCCTTCATTAGTGACAAGTACGAAGCCATATCAAAAAGATTTCTTGAGTTTAATGACCATCTGAAAGTTATTCCAACACTCAAAAACGAGCTCAGTATACTGGATTCAAGAATGCAATCCATTGATTCTCAGTTCAACTTAAAAGAGCAGTGGAGCAGGAGATCTAATATAGAAATTCTGGGTATCCCCGAAAGGAAAGGCGAAAATCTAATAGAATTGGTCTCGAAAATTGCCGAGAAGGCGGGTTTTGCCTTGAATCCTCAGATAGACGTCGATTTTGTTACAAGGGTTGCGCCGATGGACAGAGGCAGTAGCAGATCAAAGCCAGTTGTTCGTTCGTCCCTTCCTCTTGTATCTGAGGATGATCATCATCCAGCCTTGGATATTCAGATTGAGGGGTTAGACGTGAGACCCCTACGTTCTCCTGGCCGGTCCATATTGCTTTTCCATAAAAGTGACTACTCTATTATTAACGAGGAACTTTCGAAAATTGATTGGAAACAATCTTTTATGAATTTAGATGTCGACATGGCCGTGGGCAAGTTTCATGAAATCTTAGACAAGATTATTTCTGATAATGTGCCTGTGAAGGTCGTCGTTTCTGAACTCCGTAAAGAGAACTGCAACCGCCGCATCATCCTCCATCACGACAATGCGAGTTCTCACACCGCGCGCAGAACAAAAGAGTTTTTAGAGCAAGAAAACATAGAATTATTAGACCATCCGCCGTACAACCCCGACCTAAGCCCTAATGATTTCTATAATTTCCCTAAAATAAAGAATAAATTGCGTGGACAGAGATTTTCATCACCTGAAGAAGCTGTGGACGCCTACAAAACGGCCATTTTGGAGATCCCAACTTCCGAATGGAATGGTTGCTTCAATGATTGGTTCCATCGTATGGAAAAATGTGTCAAATTTCGCGGAGAATACTTCGAAAAGCAATAA
Protein
MISAFGDEAPSKTTIYRWFAEFQRGRVKLSDDLRQGHPKTTVTQENVDAVRKLIEEDRHVTYREIQATLDIGMSQIQIILHEQLGVKKLFSRWIPHSLCEEQKAARVTWCVRTLERFHAGSSNAVYNIVLVCRNYYHIGCVLPAKKDWTPDSEFKSTWICLNCATRSRTVNDDTPVRGNVRPRAPDTSNVAMRPLRTGSREREGPELQVVPLEQVRSIVRAEVQEAVACFRDTILELKSEISTLRDSVSFISDKYEAISKRFLEFNDHLKVIPTLKNELSILDSRMQSIDSQFNLKEQWSRRSNIEILGIPERKGENLIELVSKIAEKAGFALNPQIDVDFVTRVAPMDRGSSRSKPVVRSSLPLVSEDDHHPALDIQIEGLDVRPLRSPGRSILLFHKSDYSIINEELSKIDWKQSFMNLDVDMAVGKFHEILDKIISDNVPVKVVVSELRKENCNRRIILHHDNASSHTARRTKEFLEQENIELLDHPPYNPDLSPNDFYNFPKIKNKLRGQRFSSPEEAVDAYKTAILEIPTSEWNGCFNDWFHRMEKCVKFRGEYFEKQ

Summary

Uniprot
ProteinModelPortal
PDB
3K9K     E-value=3.70392e-13,     Score=183

Ontologies

GO

Topology

Length:
563
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00112
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00032
outside
1  -  563
 
 

Population Genetic Test Statistics

Pi
298.225896
Theta
135.976042
Tajima's D
1.246554
CLR
0.081956
CSRT
0.727813609319534
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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