SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01596
Pre Gene Modal
BGIBMGA008817
Annotation
PREDICTED:_uncharacterized_protein_LOC101738846_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.875
 

Sequence

CDS
ATGAAAAATTGTCTCCACCTTCAGCTCTACAGAGATCCAAAAGATCGCTACAAAAAAGGACAAACTAAAGCATCTTTATCCTTACAACAATTTTTGGGATTTGAATCTGGTTTCACCTTGGACAAAGAATCTAACACCATTGCTATCATTTGCCAAGACGTGACAGTTGTTTTGGCATTTGAGACCAGAGAACGACTAATAGCGTGGCAAGTTAAAGTTGGGAGTCAGCTGGGGTGCTCAAAGGAGTTTCTAGTCATGATTGGAGGTGGTGGAAGCAAGAAGCTTCCTGCTGGACCGGCGAGGTTGCATGTCCAGGGTCGCAGATTTGCCCTCACTAGTGGGATTCCACCGCGCTTACTTGGTCTTTGGGAGTTGGCGCATTTGAGGAGATACGGTGTAGTTGAAGGTCGCTTTTGCTTTGAGGGTGGTTCCCACTGTGGCAAAGGTGAAGGTCTGTACATGCTGATTACTGATCAAGCTCAAGAGATTACTGATACTTTTGATATGGCTGCCCAAGGAAACTTCTCCTTGCAAAGGACCCCAGTTTGTAGAAAAGATAAAGGTAAATGGCGACCAAGTACAAGATTATCGGACGCAAACACTTTTGATCCATCACTACCCGATACAGCCAGTGGTTTATATGAAGAAAATTTTTTCGGAGAAGATCGAGGAAGAACCTCTCCTTTCTGGCCTTCGGATGAAAGACAGAACTACGAAGACCAAGAGTTCAAATATTCAAGTGATTTAGAAATTGTTAAGCCACCTTGGTGTGGAGCTGATCACGTGACTTTAGAAAGATGTGATAATTGTCAGACGAAACTTGGTGTAATGTCCCGTTCATCAACAGTAGCGTTGACTCCTGGTACACAGTTCAGTCCTGCGTGGACTATGGAAGCAGTCCCAGAGAGCAGCTCTGATAATTCTTCAAATAGCACTGAATACTTGACTCCGAAAGCAATAAGAAAGCATATTTCAGGCTGCCAATGTGATGATAAACCACCAATGCGTCCACCAAAGCCAGCACATTTAGAAACGAAGAAACCACATGCATTCATTCCTGATACTTTTAGTTCAGTGAACGACAATAGTGTAAATAACCCTAGAGTTGGTCCCTATGAAAACTACGATATCCCCAAGCCGATCCAGTCCGAGATGGACAATGGTGAATATTATGATACACCTAAAAGATTGAAGGAAGCGCTAACAGATGATTTATTTAAAGTTACAAAGAAATCTGCGCCCGGTAATTTAGTTTTGAAGAAAAATTGCGGTTGTATTTTAAAATTTGGTTCAAAAAAACCAGTTATAGTCGAATGTGATGAAAGTCTACAGCCGGTAGAATGTCCGTGTCTAAAAGTTACTAATTGGGCAAACAACCTGATAAGTCTTCCATACTGCAAACGCGACACTAACATATCTGAAAACAGCGACAATCAAAGTCGTAGAGATGAATCAGTACTGTATGCCACGATAGATGTTTCCAGAAAAACCAATAGGCAAAGTGCAATATCTGATAAAGAAATACAAGAAGAAAGAAGTCAAGGATCAAGATTTATGAACTACCAAAATGTAGAGCCAAAACCAGATAAAGAATTCGAAGGTCCTTTTGCAAATTACGAAAATCTAGAATTTTCTTTATCTTTAGAGTATTATGAGAACGCTAAGGATCTATTGAAAAAGGCTGGCGTTACTCAAAGCGAACTTGATGCGTTAAGTGCCAACATAGATCTAGCAGTTACAACCATGCCAAGAAAATCTAAGCTGTGTACAAAATGTGGGCACTCCCAACATAATCTCAACCAGAACTCTAAAAAAAATAAAAGTGACGAGTATTTACTAATGGAACCTTGCCACGAAATTAAAAAAAGCTATTGTAAAACTGTTGGTTCTAATGCAGGCTATACGCCAATGTTGCCAAACCCGAATTGGTCCCAAAGCCTAAAGCATCCATTAAATAAAATTAATAAGGTAGACATTGAAAAGTCTTTGAGCATCCCAACGTTGCATGGAAGTACTAGAAGCAATACTTCCGAAAATAGCAATCTAGGTATATTACAAAAGCGATCGAGTTCAGTCGACTCTGCGAGATTACTTGAAGATCTCAAAGAATTCGATAGTAGCATCGGAAGCCACGCTACATCGTCATCGCTAGAAACTTTAAGGAATTTAGCTATTGAAAAGAGGAGATCTTCATCAACCTGCGATAACGATAGAGACTGCTACGATTGTTGTAAATCATCAGGATCCGAAAACAAAACGGATGACAGCTCTTCAAAAGAAATACCGCATTTGAGAAACAAACACATGGATAATGCCCAGATAAAAAGATCTTCCAGCGTTCCGTGTAAAGGTGGTAACAGGGACTCTTCAAGTTCAAATGATTCCGGAGTTTCCAGCTGCTCATTAAAACATGGAGGGGGAGACATTCAAGAATTTGAAATGCCTCTAACATGTGGTCAATCAAGGTATCATTACATGATGCATAAAAGGATGAGAGAAAACCTATCTGGAGGCAATCATTCCCCATTACCCAGAAAATCTAAATCATCCGACCCCTTAAGAGATATGTCCTTACAAATTCATAAAGCGAATATACCAGCCAAATCGTCTTCTGCTGAGGCAGAAGTTCCTGTCTTACCTCCAAAGCAGTTCAAAGGTGTAATGGACACTCACAGTACTTCGAGCGGAACGTCGGACATGTCAGATTACATCGAGACACTTTCTTTGACGTCCTCTCATTCGTCATCTGATACTCCAACTGGCGTTAGGATCAGTCGCCAAACAACGAGCACACTCAGACCTCGCTCCGGCAAAGAATATCATAACCTCGACCCGATCATCACTTCAATGTACAAAAACGGGAAGGACTTAGCCAACTATACTAATATACCTTAA
Protein
MKNCLHLQLYRDPKDRYKKGQTKASLSLQQFLGFESGFTLDKESNTIAIICQDVTVVLAFETRERLIAWQVKVGSQLGCSKEFLVMIGGGGSKKLPAGPARLHVQGRRFALTSGIPPRLLGLWELAHLRRYGVVEGRFCFEGGSHCGKGEGLYMLITDQAQEITDTFDMAAQGNFSLQRTPVCRKDKGKWRPSTRLSDANTFDPSLPDTASGLYEENFFGEDRGRTSPFWPSDERQNYEDQEFKYSSDLEIVKPPWCGADHVTLERCDNCQTKLGVMSRSSTVALTPGTQFSPAWTMEAVPESSSDNSSNSTEYLTPKAIRKHISGCQCDDKPPMRPPKPAHLETKKPHAFIPDTFSSVNDNSVNNPRVGPYENYDIPKPIQSEMDNGEYYDTPKRLKEALTDDLFKVTKKSAPGNLVLKKNCGCILKFGSKKPVIVECDESLQPVECPCLKVTNWANNLISLPYCKRDTNISENSDNQSRRDESVLYATIDVSRKTNRQSAISDKEIQEERSQGSRFMNYQNVEPKPDKEFEGPFANYENLEFSLSLEYYENAKDLLKKAGVTQSELDALSANIDLAVTTMPRKSKLCTKCGHSQHNLNQNSKKNKSDEYLLMEPCHEIKKSYCKTVGSNAGYTPMLPNPNWSQSLKHPLNKINKVDIEKSLSIPTLHGSTRSNTSENSNLGILQKRSSSVDSARLLEDLKEFDSSIGSHATSSSLETLRNLAIEKRRSSSTCDNDRDCYDCCKSSGSENKTDDSSSKEIPHLRNKHMDNAQIKRSSSVPCKGGNRDSSSSNDSGVSSCSLKHGGGDIQEFEMPLTCGQSRYHYMMHKRMRENLSGGNHSPLPRKSKSSDPLRDMSLQIHKANIPAKSSSAEAEVPVLPPKQFKGVMDTHSTSSGTSDMSDYIETLSLTSSHSSSDTPTGVRISRQTTSTLRPRSGKEYHNLDPIITSMYKNGKDLANYTNIP

Summary

Pfam
PF02174   IRS
Interpro
IPR011993   PH-like_dom_sf        + More
IPR037746   Dok-7       
IPR002404   IRS_PTB       
IPR001849   PH_domain       
IPR037747   Dok-7_PH       
Gene 3D
PDB
3ML4     E-value=6.25446e-26,     Score=295

Ontologies

Topology

Length:
964
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00276
Exp number, first 60 AAs:
0.000670000000000001
Total prob of N-in:
0.00015
outside
1  -  964
 
 

Population Genetic Test Statistics

Pi
256.214332
Theta
203.930871
Tajima's D
0.912943
CLR
0.201159
CSRT
0.634768261586921
Interpretation
Uncertain
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