SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01585
Pre Gene Modal
BGIBMGA008833
Annotation
hypothetical_protein_[Leifsonia_aquatica]
Location in the cell
Nuclear   Reliability : 1.879 PlasmaMembrane   Reliability : 1.614
 

Sequence

CDS
ATGAAGACAGCTGTGACTCTGTTAACCCTGTTGGCGATGGCAGTCGCTCGGCCTTCACCGCTGCCTCTCCCACTGGTTCAGCTCATCGTCAACGTCAACGTTACAGACACGAACCCTTCCATCGTCAACCCTGTAATCCCAGAACCCATCAAACCTCCAGTAATCGTTGACCCTATCGTTCCAGAGCCTCCAGTAAATCCTATTGATCCCATTCCAATTGACCCTGAGGTTCCCGAACCAGAGCTTCCCGTTGCTTCTGAGCCTGAACCAGAGCAGCCCATCATTCCCGACCCGGAGCCAGAACAGCCCATCATTCCTGAGCCGGAGCCAGAGAACCCTGAGCTTCCTGAGCCTGAAGTCCCCAAACCAGACCCGGAAGTCATTGAGGTTCCTGAAGCGCCTGAGGTCATTGAAAAACCAGAAGAGACTCAACCTGAACCTGCCGAGGAGACTCCAAAACAAGAGGACTAA
Protein
MKTAVTLLTLLAMAVARPSPLPLPLVQLIVNVNVTDTNPSIVNPVIPEPIKPPVIVDPIVPEPPVNPIDPIPIDPEVPEPELPVASEPEPEQPIIPDPEPEQPIIPEPEPENPELPEPEVPKPDPEVIEVPEAPEVIEKPEETQPEPAEETPKQED

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.985943
 
 
Length:
156
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.38784
Exp number, first 60 AAs:
0.38784
Total prob of N-in:
0.11789
outside
1  -  156
 
 

Population Genetic Test Statistics

Pi
256.623937
Theta
183.480428
Tajima's D
1.310796
CLR
0
CSRT
0.734213289335533
Interpretation
Uncertain
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