SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01581  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008814
Annotation
juvenile_hormone_diol_kinase_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.633
 

Sequence

CDS
ATGGTGTCCGAAGTCAGAAAAAAGAAACTGCTCCATGTCTTCACCGTATTCTTTGACTCCGATAAGAGTGGAGTCGTAGAAAAACAAGACTTTGAACTGGCTGCCCAGAACATCGCCAAACTCAGAGGGTGGGCCCCTGGAAGCCCCACCTACGACATCCTGCAAGAAAGCATGATCGCCATCTGGCTGGGATTGCAGAAACAAGCCGACGCTGATGGAGACGGAAAAGTTACTCAGGACGAATGGCTAGCTCTTTGGGACGAGTACGCCAAGGACCCAGCTGCAGCAAAAGACTGGCAAAATCTTCTGTGCAAAAGCATCTTCCAGATCCAAGACTCCAGCAATGATGGTTCAGTCGATGTCAACGAGTACGTGACCGTGCACGAGTCTTTTGGTCTCAATAAGGACGAAAGCACCGAGGCCTTTAAAAAACTGGCTAAAGGTAAAGACTCAATCTCTTGGGCAGATTTCCAGGAATTGTGGAAGGAGTATTTCAGCAGCGACGACCCGGATGTACCCGGTAACTACATCTTCGGTAGATTGACTTGTTAA
Protein
MVSEVRKKKLLHVFTVFFDSDKSGVVEKQDFELAAQNIAKLRGWAPGSPTYDILQESMIAIWLGLQKQADADGDGKVTQDEWLALWDEYAKDPAAAKDWQNLLCKSIFQIQDSSNDGSVDVNEYVTVHESFGLNKDESTEAFKKLAKGKDSISWADFQELWKEYFSSDDPDVPGNYIFGRLTC

Summary

EMBL
BABH01037604    AY363308    AAQ63486.1    KC127671    AGG56523.1    JTDY01001913    + More
KOB72552.1    ODYU01004874    SOQ45193.1    KZ149928    PZC77499.1    KQ459562    KPI99731.1    KQ461158    KPJ08058.1    NWSH01006845    PCG63218.1    AGBW02010752    OWR47916.1    KP192493    AKN89772.1    KY938810    ASA46451.1    PZC77500.1    GBRD01014476    JAG51350.1    ODYU01007837    SOQ50962.1    KPJ08053.1    BABH01008872    BABH01008873    AJ430670    CAD23378.1    KPI99726.1    AGBW02009771    OWR49958.1    HM626514    ADK94879.2    KQ459579    KPI99449.1    PCG63217.1    KQ460650    KPJ13114.1    KZ150051    PZC74420.1    KPI99730.1    GALX01003381    JAB65085.1    GFDF01010175    JAV03909.1    AXCN02002212    OWR47915.1    GEHC01001375    JAV46270.1    CH916373    EDV94328.1    UFQS01002765    UFQT01002765    SSX14626.1    SSX34023.1    KP295467    AKF11872.1    ATLV01021328    ATLV01021329    ATLV01021330    KE525316    KFB46342.1    GFDL01005365    JAV29680.1    DS231916    EDS26156.1    JXJN01007683    CH477693    EAT37201.1    KA646045    KA647919    AFP62548.1    CH902617    EDV42344.1    BT127837    AEE62799.1    KQ971312    EEZ98300.2    GAPW01004822    JAC08776.1    EAT37200.1    KC740808    AGM32632.1    JRES01001160    KNC24955.1    CH964251    EDW83422.1    KB632098    ERL88789.1    CH940650    EDW67867.1    CH933806    EDW16193.1    GBXI01008480    JAD05812.1    OUUW01000005    SPP80458.1    CM000070    EAL27147.1    CH479198    EDW28050.1    GAMC01013584    JAB92971.1    AAAB01008952    EAA10596.3    APCN01006585    CM000364    EDX12664.1    CM000160    EDW97002.1    CH480827    EDW44844.1    CH954181    EDV48813.1    CCAG010014864    GDHF01030103    GDHF01016478    GDHF01008965    JAI22211.1    JAI35836.1    JAI43349.1    AF014952    AF093240    AE014297    AY089680    AAB67805.1    AAC62484.1    AAF55336.1    AAL90418.1    GL438827    EFN68228.1    GL447257    EFN86675.1    JN256054    AEN03041.1    CP012526    ALC46120.1    CVRI01000026    CRK92369.1    JTDY01009505    KOB63382.1    KK107453    EZA50658.1    GAKP01015927    GAKP01015924    JAC43025.1    GFDF01010258    JAV03826.1    AAZX01008671    AAZX01011177    AAZX01016880    AAZX01021162    KPI99732.1    GEZM01053938    JAV73903.1    GFDF01010038    JAV04046.1    MF189034    AWI63388.1    QOIP01000004    RLU23750.1    AB180433    BAD26677.1    JN410823    AEP25399.1    GECZ01021798    GECZ01005426    JAS47971.1    JAS64343.1    KPJ08057.1    GEBQ01019844    JAT20133.1   
Pfam
PF13202   EF-hand_5        + More
PF13833   EF-hand_8
PF13499   EF-hand_7
PF13405   EF-hand_6
Interpro
IPR011992   EF-hand-dom_pair        + More
IPR002048   EF_hand_dom       
IPR018247   EF_Hand_1_Ca_BS       
SUPFAM
SSF47473   SSF47473       
PDB
4NDC     E-value=1.42133e-26,     Score=293

Ontologies

Topology

Length:
183
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00215
Exp number, first 60 AAs:
0.00171
Total prob of N-in:
0.28844
outside
1  -  183
 
 

Population Genetic Test Statistics

Pi
31.620468
Theta
25.866265
Tajima's D
0.682377
CLR
0.482205
CSRT
0.571021448927554
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 QDFELAAQNIAKLR 100.00 3e-08
28556443 DWQNLLCK 100.00 3e-08
28556443 EYFSSDDPDVPGNYIFGR 100.00 2e-07
28556443 EYFSSDDPDVPGNYIFGR 100.00 2e-07
28556443 EYFSSDDPDVPGNYIFGR 100.00 2e-07
28556443 EYFSSDDPDVPGNYIFGR 100.00 2e-07
28556443 DWQNLLCK 100.00 2e-07
28556443 YALHEYLDVNR 100.00 2e-07
28556443 LLHVFTVF 100.00 1e-05
28556443 QDFELAAQNIAK 100.00 5e-05
28556443 SSDDPDVPGNYIFGR 100.00 3e-04
28556443 EYFSSDDPDVPGNYIFGR 100.00 3e-04
28556443 EYFSSDDPDVPGNYIFGR 100.00 3e-04
28556443 GKDSISWADFQEL 100.00 0.004
28556443 LLHVFTVFFDSDK 100.00 0.008
28556443 LLHVFTVFFDSDK 100.00 0.008
28556443 LLHVFTVFFDSDK 100.00 0.008
28556443 GKDSISWADFQELWK 100.00 0.008
28556443 GKDSISWADFQELWK 100.00 0.008
28556443 VTQDEWLALWDEYAKDPAAAK 100.00 0.012
28556443 QDFELAAQNIAK 100.00 0.012
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