Gene

KWMTBOMO01572

Annotation

endonuclease-reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr3(+):14118880-14122095      View in EpiBrowser

Full name

Sodium/hydrogen exchanger      

Location in the cell

Mitochondrial   Reliability : 1.953 Nuclear   Reliability : 1.777

CDS

ATGGCAGCTACAAATAAAAAACGGCCCCCAGTTCCCGGCAGCTTTACTATCCCTGGCTACGGTAGCAGCCATGGTAACGGTAAGGCAGGGGGTGCGAAGAATCCCCGGGCTACGGACAGCTACCACCAAATGACCCTGGCGACTCTCAATACCCGGACTCTGCGGCTTGACGAACATATTGAGGAACTGGAAGTGGAATTAGGAAGGATACGATGGCACGTCCTAGGGTTGTGCGAAGTCCGAAGACAGGGGGAGGACGTCATAACTCTAGACTCAGGCCACCTATTCTACTTCCGGGAAGGAGACCAACCTGGACAAGGTGGAGTTGGCTTTCTCGTCAATAAAGTCCTCACGGGCAACATTGTAGAGGTATCCAGTGTGTCGACACGGGTAGCGTACCTCATAATTAAGCTCACCGAAAGGTACTCCCTTAAGGTGGTGCAAGTATACGCACCGACTTCGTCATACTCGGATGACGATGTGGAGTTTGTGTACGACGATATCACCAGGGCTCTGCACAATACCACAAAAGCCCACTTCAATGTTGTCATGGGAGATTTTAACGCTAAAGTTGGAGTACAGACTTGCGACGAATCGGTGCTAGGATCCTTCGGTTATGGATGTAGGAACCACAGGGGGCAAATGCTAGTCAACTTCCTTCAGCGCGAGAGGCTCTTTCTAATGAACTCGTTCTTTGAAAAGAAGCCACAAAGAAAGTGGACTTGGCTAAGCCCCGACACTGTGACGAAAAACGAGATAGACTTTATTATGACGGACAAGAAACATATATTCAGGGATGTCTCTGTGATCAGCAGGTTCAATACCGGTAGTGATCACCGACTTGTCAGAGGCACACTGAATATGGACTTCAAGTTAGAACGCAGCCGTCTAATAAAGTCTACGCTTCGACCCAGCCTACATCACATGGCTGTAGATCCGGAGCAATTCCAGCTAGATCTCCACAACCGATTCGCTGCCTTGGAAACCACCACAGACGTAGACGAGGCCTTAGATGGCGTGGTGAGGACACTGAGACAAGAGGGACAGAGATTGTGTCCAAAGGGTCGTACAGGCAGAAAATCAAAATTATCATCCGAGACTCTCCGGTTAATGGAAGAAAGGCGAGAAAACACACAGGCCACACAATCAGAGAAGATGGCTCTTAGTAAGAAAATCAGGACGCTGATACGACGCGATCTCCGACGGTACAATACTCAGCGGATCAATGACGCAATTGAGCAAAACCGAGGAGCCAAGGTGTTCGTGCAGCGTCTTGGTAGAAGCCACCTTACAAAACTGACCACAAGGGATGGCCAAATTCTCGCCTCCAAACCGGAGATTCTCAAGGAAATTGAGGACTTCTACGGACGTCTCTATATTTCCAAAACCACCAAGTCTGCCTCTGACCCAGCAGATGTCCGAGCCACACTATCTCGCCACTACACCGACGAGCTGCCACAGATTAGTGTGGACGAGATCGGGATGGCTCTTGAAAATCTTAAAAACGGAAAAGCCCCGGGCGAGGATGGTGTTACTTCTGAGCTCTTGAAAGCAGGAGGTCTTCCTGTTATTATGGAGCTCCAGAAGCTCTTTAACACTGTCCTCTTTACCGGTAGAACTCCAAAGGCGTGGAGCAGGAGCATAGTTGTCCTTTTCTTTAAAAAAGGAGATAAAACACTTTTAAAGAATTATCGCCCCATCTCGCTCCTGAGCCACGTCTACAAATTGTTTTCGAGAGTCATAACGAATCGTCTCGCTCAGAGACTTGACGACTTCCAGCCTCCGGAGCAGGCAGGATTCCGAAGAGGATTTGGTACCGTGGACCACATTCACACAGTTCGGCAGATTATACAGAAGACTGAAGAGTATAATCTGCCACTATGTCTGGCGTTTGTGGACTACGAGAAAGCCTTTGACTCGATCGAGACCTGGGCTGTTCTGGAATCCTTGCAGCGGTGTCAAGCTGACTGGCGATACATCGATGCAATAAGATGCCTGTACGATGCCGCTACAATGACCGTCCAAGTACAGAAAGAGCAGACGAGACCAATCCAGTTGCGCAGAGGTGTAAGACAGGGGGATATTATATCCCCGAAACTGTTTACAAACGCACTGGAGGACGTCTTCAAGACTCTGGACTGGAACAGACGCGGCATTAACATAAACGGCGAGTACATCTCACATCTTCGCTTTGCCGATGATATCGTCATCATGGCGGAATCGCTGCAGGACCTACAAGAAATGGTGCACAGCCTTAATACTGCATCCCAACGGGTTGGCCTCGGAATGAACTTGGATAAAACCAAGGTAATGTTTAACGGAAACGTCATTCCGAGACCAATCGATGTGGATGGTACACCTCTCGAAGTTGTTCAAGAGTATGTCTACCTAGGACAGACCCTACAACTAGGTAGAAACAACTTTGAGAAGGAGGTGACCAGAAGGATTCAGTTGGGCTGGGCAGCGTTCGGGAAGCTTCGTCAGGTCTTTTCGTCGCCCATACCACAATGTCTGAAGACAAAGGTCTATAATCAGTGCGTCCTACCCGTGCTTACCTACGGAGCCGAAACGTGGACACTGACTGTGCGACTAGTCCACCAACTAAAAGTTACTCAGCGAGCTATGGAGCGAGCTATGCTCGGTTTGTCATTGCGAGACCGAATACGCAATGAGGTCATTCGGGCAAAGACCAAAGTGATCGACATAGCTCGCAGAGTTAGTAAGCTGAAGTGGCAGTGGGCTGGTCACATAAGTCGCAGAACCGATAACCGTTGGGGTAGACGTGTTCTGGAGTGGAGACCGCGAACCGGCAAACGTAGTGTAGGACGCCCTCCTGCTAGATGGAGCGACGACCTACGCAAGGCAGCTGGCAGTAACTGGATGCGTAGAACCGAAGATCGGGTTCAGTGGCGAGCTTTGGGGGAGGCCTATGTCCAGCAGTGGACTGCCGCAGGCTGA

Protein

MAATNKKRPPVPGSFTIPGYGSSHGNGKAGGAKNPRATDSYHQMTLATLNTRTLRLDEHIEELEVELGRIRWHVLGLCEVRRQGEDVITLDSGHLFYFREGDQPGQGGVGFLVNKVLTGNIVEVSSVSTRVAYLIIKLTERYSLKVVQVYAPTSSYSDDDVEFVYDDITRALHNTTKAHFNVVMGDFNAKVGVQTCDESVLGSFGYGCRNHRGQMLVNFLQRERLFLMNSFFEKKPQRKWTWLSPDTVTKNEIDFIMTDKKHIFRDVSVISRFNTGSDHRLVRGTLNMDFKLERSRLIKSTLRPSLHHMAVDPEQFQLDLHNRFAALETTTDVDEALDGVVRTLRQEGQRLCPKGRTGRKSKLSSETLRLMEERRENTQATQSEKMALSKKIRTLIRRDLRRYNTQRINDAIEQNRGAKVFVQRLGRSHLTKLTTRDGQILASKPEILKEIEDFYGRLYISKTTKSASDPADVRATLSRHYTDELPQISVDEIGMALENLKNGKAPGEDGVTSELLKAGGLPVIMELQKLFNTVLFTGRTPKAWSRSIVVLFFKKGDKTLLKNYRPISLLSHVYKLFSRVITNRLAQRLDDFQPPEQAGFRRGFGTVDHIHTVRQIIQKTEEYNLPLCLAFVDYEKAFDSIETWAVLESLQRCQADWRYIDAIRCLYDAATMTVQVQKEQTRPIQLRRGVRQGDIISPKLFTNALEDVFKTLDWNRRGININGEYISHLRFADDIVIMAESLQDLQEMVHSLNTASQRVGLGMNLDKTKVMFNGNVIPRPIDVDGTPLEVVQEYVYLGQTLQLGRNNFEKEVTRRIQLGWAAFGKLRQVFSSPIPQCLKTKVYNQCVLPVLTYGAETWTLTVRLVHQLKVTQRAMERAMLGLSLRDRIRNEVIRAKTKVIDIARRVSKLKWQWAGHISRRTDNRWGRRVLEWRPRTGKRSVGRPPARWSDDLRKAAGSNWMRRTEDRVQWRALGEAYVQQWTAAG

Similarity

Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.

Feature

chain  Sodium/hydrogen exchanger

Uniprot

D7F157   D7F165   D7F160   D7F164   D7F159   D7F158   + More
D7F166   A0A2W1BZV1   A0A2H1VS24   D7F179   D7F176   A0A023EXV2   D7F177   D7F178   A0A2G8JFM9   A0A016S1D2   A0A0K0FAW8   A0A016SG46   A0A016TK11   A0A016W4R1   A0A0P4VWD0   A0A023EWU8   A0A016V419   A0A016WPY4   A0A016WCB8   A0A016ULU9   A0A016T7J7   A0A2H1WF27   A0A016S795   A0A016WA79   A0A016S5B2   A0A016VVN3   A0A016RUR3   A0A016V6A2   E3NC15   A0A016RV73   A0A0N5C0B1   E3MH09   A0A016RRX8   A0A016UN79   A0A016SLV8   A0A016THC6   A0A069DX96   A0A069DZM5   A0A016U3L3   A0A016U352   A0A016SVA2   A0A016U784   A0A016T9D3   A0A016T9A5   A0A016SW37   A0A2H2JFN0   A0A016WYN9   A0A016W1X2   A0A016WUN2   A0A016TX70   A0A016S403   A0A016WFS9   A0A016SCL7   A0A016SY13   A0A016S7F6   A0A016U6B7   A0A016TQJ1   A0A016U123   A0A016WE57   A0A016VT25   A0A016VLP0   A0A016UJS4   A0A016TK92   A0A016T4C4   A0A016SCZ8   A0A016X207   A0A016SXL6   A0A016SCT9   A0A016SPR9   A0A016S6J0   A0A016VGA0   A0A016V007   A0A016WPX9   E3NGJ2   A0A016WNH0   A0A016WN14   A0A016WQM8   A0A016SQY7   A0A016SX67   A0A016WS23   A0A016S4W9   A0A016WEQ1   K7IG36   A0A016SGC3   A0A016S4J2   K7I2A1   K7IG35   K7I2A2  

Pubmed

20470440    28756777    25474469    29023486    25730766    27129103    + More
26334808   

EMBL

FJ265542    ADI61810.1    FJ265550    ADI61818.1    FJ265545    ADI61813.1    + More
FJ265549    ADI61817.1    FJ265544    ADI61812.1    FJ265543    ADI61811.1    FJ265551    ADI61819.1    KZ149907    PZC78256.1    ODYU01004088    SOQ43598.1    FJ265564    ADI61832.1    FJ265561    ADI61829.1    GBBI01004876    JAC13836.1    FJ265562    ADI61830.1    FJ265563    ADI61831.1    MRZV01002136    PIK34564.1    JARK01001655    EYB84321.1    JARK01001565    EYB89683.1    JARK01001676    JARK01001446    JARK01001433    EYB83199.1    EYC01126.1    EYC02928.1    JARK01001337    EYC34625.1    GDKW01001596    JAI54999.1    GBBI01004877    JAC13835.1    JARK01001354    EYC21986.1    JARK01000173    EYC41342.1    JARK01000388    EYC37469.1    JARK01001370    EYC16150.1    JARK01001736    JARK01001462    JARK01001379    JARK01001338    EYB80775.1    EYB98943.1    EYC13646.1    EYC33347.1    ODYU01008249    SOQ51673.1    JARK01001621    EYB86109.1    JARK01000460    EYC36749.1    JARK01001626    EYB85833.1    JARK01001340    EYC30828.1    JARK01001711    EYB81734.1    JARK01001353    EYC22263.1    DS268591    EFO92565.1    JARK01001700    JARK01001393    EYB82228.1    EYC10181.1    DS268444    EFP01729.1    JARK01001730    EYB81048.1    EYC16376.1    JARK01001543    EYB91356.1    JARK01001438    EYC02111.1    GBGD01000453    JAC88436.1    GBGD01000380    JAC88509.1    JARK01001395    EYC09730.1    EYC09729.1    JARK01001505    EYB94618.1    JARK01001389    EYC11015.1    JARK01001459    EYB99276.1    EYB99275.1    EYB94617.1    JARK01000063    EYC44387.1    EYC33297.1    JARK01000109    EYC42952.1    JARK01001407    EYC07212.1    JARK01001639    EYB85201.1    JARK01000302    EYC38674.1    JARK01001628    JARK01001583    JARK01001528    JARK01001506    JARK01001470    JARK01001467    JARK01001463    JARK01001457    JARK01001432    JARK01001420    JARK01001403    JARK01001371    JARK01001369    JARK01001360    JARK01001349    JARK01000603    JARK01000080    EYB85741.1    EYB88438.1    EYB92544.1    EYB94540.1    EYB98080.1    EYB98468.1    EYB98899.1    EYB99568.1    EYC03088.1    EYC05014.1    EYC08153.1    EYC15852.1    EYC16408.1    EYC19456.1    EYC22445.1    EYC24734.1    EYC24778.1    EYC24866.1    EYC33488.1    EYC35672.1    EYC43798.1    JARK01001497    EYB95322.1    JARK01001612    EYB86585.1    EYC10874.1    JARK01001421    EYC04912.1    JARK01001401    EYC08686.1    JARK01000343    EYC38099.1    EYC30744.1    JARK01001344    EYC28216.1    JARK01001372    EYC15614.1    EYC03125.1    JARK01001475    EYB97550.1    JARK01001581    EYB88505.1    JARK01000008    EYC46079.1    JARK01001500    EYB95049.1    JARK01001582    EYB88498.1    JARK01001531    EYB92324.1    JARK01001618    EYB86258.1    JARK01001346    EYC26445.1    JARK01001357    EYC20551.1    JARK01000161    EYC41641.1    DS268655    EFO97114.1    JARK01000177    EYC41210.1    EYC41209.1    JARK01000165    EYC41537.1    JARK01001524    EYB92970.1    JARK01001343    EYB95040.1    EYC28825.1    JARK01000146    EYC42042.1    JARK01001637    EYB85284.1    JARK01000347    EYC38051.1    JARK01001568    EYB89432.1    EYB85282.1   

Proteomes

UP000230750    UP000024635    UP000035680    UP000008281    UP000046392    UP000005237    + More

PRIDE

D7F157    D7F165    D7F160    D7F164    D7F159    D7F158    + More
D7F166    D7F179    D7F176    D7F177    D7F178   

Pfam

PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF03372   Exo_endo_phos
PF10328   7TM_GPCR_Srx
PF00999   Na_H_Exchanger

Interpro

IPR005135   Endo/exonuclease/phosphatase        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR000477   RT_dom       
IPR001507   ZP_dom       
IPR019430   7TM_GPCR_serpentine_rcpt_Srx       
IPR017452   GPCR_Rhodpsn_7TM       
IPR018422   Cation/H_exchanger_CPA1       
IPR006153   Cation/H_exchanger       
IPR004709   NaH_exchanger       

SUPFAM

SSF56219   SSF56219       

Gene 3D

3.60.10.10    

ProteinModelPortal

D7F157   D7F165   D7F160   D7F164   D7F159   D7F158   + More
D7F166   A0A2W1BZV1   A0A2H1VS24   D7F179   D7F176   A0A023EXV2   D7F177   D7F178   A0A2G8JFM9   A0A016S1D2   A0A0K0FAW8   A0A016SG46   A0A016TK11   A0A016W4R1   A0A0P4VWD0   A0A023EWU8   A0A016V419   A0A016WPY4   A0A016WCB8   A0A016ULU9   A0A016T7J7   A0A2H1WF27   A0A016S795   A0A016WA79   A0A016S5B2   A0A016VVN3   A0A016RUR3   A0A016V6A2   E3NC15   A0A016RV73   A0A0N5C0B1   E3MH09   A0A016RRX8   A0A016UN79   A0A016SLV8   A0A016THC6   A0A069DX96   A0A069DZM5   A0A016U3L3   A0A016U352   A0A016SVA2   A0A016U784   A0A016T9D3   A0A016T9A5   A0A016SW37   A0A2H2JFN0   A0A016WYN9   A0A016W1X2   A0A016WUN2   A0A016TX70   A0A016S403   A0A016WFS9   A0A016SCL7   A0A016SY13   A0A016S7F6   A0A016U6B7   A0A016TQJ1   A0A016U123   A0A016WE57   A0A016VT25   A0A016VLP0   A0A016UJS4   A0A016TK92   A0A016T4C4   A0A016SCZ8   A0A016X207   A0A016SXL6   A0A016SCT9   A0A016SPR9   A0A016S6J0   A0A016VGA0   A0A016V007   A0A016WPX9   E3NGJ2   A0A016WNH0   A0A016WN14   A0A016WQM8   A0A016SQY7   A0A016SX67   A0A016WS23   A0A016S4W9   A0A016WEQ1   K7IG36   A0A016SGC3   A0A016S4J2   K7I2A1   K7IG35   K7I2A2  

PDB

6AR3     E-value=7.81316e-05,     Score=114

KEGG

101743122    no KO assigned | (RefSeq) uncharacterized LOC101743122

GO

GO:0004519   GO:0003964   GO:0016021   GO:0016758   GO:0006885   GO:0015385  

PANTHER

PTHR10110  

Length:

985

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01813

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.00057

outside

1  -  985

 

 

Pi

263.862379

Theta

138.331885

Tajima's D

1.378814

CLR

359.836602

CSRT

0.755562221888906

Interpretation

Uncertain